Wall clock time and date at job start Thu Mar 4 2021 17:49:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28480 * 124.88596 * 2 1 4 4 C 1.31805 * 110.07488 * 180.13116 * 3 2 1 5 5 C 1.47708 * 126.51675 * 179.85865 * 4 3 2 6 6 O 1.21572 * 119.99895 * 179.68681 * 5 4 3 7 7 N 1.34775 * 119.99901 * 359.68432 * 5 4 3 8 8 C 1.46504 * 119.99841 * 180.02562 * 7 5 4 9 9 C 1.52996 * 109.46912 * 179.97438 * 8 7 5 10 10 F 1.39895 * 112.85134 * 48.80319 * 9 8 7 11 11 C 1.53781 * 113.61207 * 179.97438 * 9 8 7 12 12 C 1.53776 * 87.08215 * 140.06453 * 11 9 8 13 13 H 1.09004 * 113.61390 * 89.20040 * 12 11 9 14 14 C 1.52999 * 113.61491 * 220.02020 * 12 11 9 15 15 O 1.42903 * 109.47256 * 185.00283 * 14 12 11 16 16 C 1.53780 * 87.08254 * 334.56758 * 12 11 9 17 17 C 1.41507 * 106.96343 * 359.58994 * 4 3 2 18 18 C 1.35037 * 124.88855 * 179.67069 * 2 1 3 19 19 C 1.50700 * 126.38328 * 0.05421 * 18 2 1 20 20 O 1.42905 * 109.47252 * 330.00349 * 19 18 2 21 21 Si 1.86296 * 109.47323 * 210.00095 * 19 18 2 22 22 H 1.09002 * 109.47062 * 270.33068 * 1 2 3 23 23 H 1.09000 * 109.46821 * 30.33153 * 1 2 3 24 24 H 1.08998 * 109.46944 * 150.32975 * 1 2 3 25 25 H 0.96998 * 120.00333 * 0.02562 * 7 5 4 26 26 H 1.09008 * 109.46973 * 59.99642 * 8 7 5 27 27 H 1.08997 * 109.46848 * 300.00324 * 8 7 5 28 28 H 1.08998 * 113.61701 * 25.51501 * 11 9 8 29 29 H 1.09000 * 113.69243 * 254.62766 * 11 9 8 30 30 H 1.08997 * 109.47286 * 64.99843 * 14 12 11 31 31 H 1.09008 * 109.47201 * 304.99623 * 14 12 11 32 32 H 0.96700 * 114.00311 * 180.02562 * 15 14 12 33 33 H 1.08997 * 113.61633 * 139.97829 * 16 12 11 34 34 H 1.09002 * 113.61577 * 270.88412 * 16 12 11 35 35 H 1.07998 * 127.24641 * 180.21575 * 17 4 3 36 36 H 1.09004 * 109.47224 * 90.00185 * 19 18 2 37 37 H 0.96697 * 113.99850 * 299.99657 * 20 19 18 38 38 H 1.48500 * 109.99826 * 58.68284 * 21 19 18 39 39 H 1.48497 * 110.00330 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4741 0.7170 -0.0028 5 6 4.6273 1.6400 -0.0067 6 8 5.7597 1.1978 -0.0033 7 7 4.4240 2.9723 -0.0141 8 6 5.5678 3.8877 -0.0185 9 6 5.0646 5.3325 -0.0273 10 9 4.0833 5.5719 0.9406 11 6 6.1927 6.3777 -0.0318 12 6 5.3361 7.1827 -1.0232 13 1 4.6465 7.8760 -0.5417 14 6 6.1469 7.8344 -2.1452 15 8 5.2865 8.6504 -2.9426 16 6 4.6887 5.8474 -1.4267 17 6 3.5273 -0.6971 0.0049 18 6 2.2374 -1.1076 0.0064 19 6 1.7535 -2.5348 0.0134 20 8 0.4950 -2.6078 0.6864 21 14 2.9940 -3.6068 0.8982 22 1 -0.3633 0.0059 1.0277 23 1 -0.3633 0.8870 -0.5190 24 1 -0.3633 -0.8929 -0.5087 25 1 3.5205 3.3251 -0.0164 26 1 6.1731 3.7087 -0.9073 27 1 6.1721 3.7184 0.8727 28 1 7.1261 6.0109 -0.4588 29 1 6.3330 6.8748 0.9280 30 1 6.5930 7.0594 -2.7684 31 1 6.9348 8.4514 -1.7130 32 1 5.7341 9.0954 -3.6752 33 1 3.6136 5.9159 -1.5925 34 1 5.2109 5.3356 -2.2351 35 1 4.4109 -1.3180 0.0083 36 1 1.6377 -2.8843 -1.0126 37 1 0.5232 -2.3116 1.6065 38 1 3.1846 -3.1212 2.2886 39 1 2.5287 -5.0169 0.9115 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16500592_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:49:25 Heat of formation + Delta-G solvation = -59.812568 kcal Electronic energy + Delta-G solvation = -24375.583099 eV Core-core repulsion = 20430.035152 eV Total energy + Delta-G solvation = -3945.547947 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.132 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -48.89082 -43.86633 -40.64641 -39.73876 -38.17611 -37.19641 -35.67404 -34.43417 -32.69911 -30.50343 -28.61361 -27.30983 -27.00584 -26.51032 -24.10987 -22.21508 -22.20188 -21.11024 -20.59817 -19.32098 -18.27442 -17.79080 -17.63686 -17.51260 -17.14054 -16.90581 -16.45441 -16.41280 -16.06867 -15.78542 -15.70702 -15.55109 -14.99008 -14.89525 -14.71053 -14.27975 -14.08727 -13.81401 -13.60590 -13.42433 -13.40084 -13.20743 -12.69347 -12.39018 -12.29696 -12.00718 -11.90550 -11.61476 -11.34327 -11.26045 -11.08950 -10.80998 -10.40213 -10.08993 -9.99305 -4.89208 0.39854 0.80669 1.21220 1.52380 1.67551 1.92357 2.01102 2.25623 3.03231 3.07996 3.11471 3.15363 3.29825 3.33622 3.35855 3.53816 3.81790 3.97024 4.24401 4.27210 4.33822 4.36035 4.41566 4.45576 4.47874 4.56194 4.60414 4.62858 4.63609 4.68021 4.71724 4.84724 4.90241 4.98571 5.17441 5.25947 5.37486 5.65020 6.23609 6.28097 6.76480 6.89677 7.01866 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.265 5.265 3 N -0.270 5.270 4 C -0.041 4.041 5 C 0.606 3.394 6 O -0.559 6.559 7 N -0.711 5.711 8 C 0.113 3.887 9 C 0.076 3.924 10 F -0.201 7.201 11 C -0.130 4.130 12 C -0.113 4.113 13 H 0.084 0.916 14 C 0.084 3.916 15 O -0.600 6.600 16 C -0.143 4.143 17 C -0.184 4.184 18 C -0.013 4.013 19 C -0.045 4.045 20 O -0.538 6.538 21 Si 0.785 3.215 22 H 0.099 0.901 23 H 0.100 0.900 24 H 0.118 0.882 25 H 0.412 0.588 26 H 0.105 0.895 27 H 0.080 0.920 28 H 0.130 0.870 29 H 0.089 0.911 30 H 0.066 0.934 31 H 0.060 0.940 32 H 0.397 0.603 33 H 0.072 0.928 34 H 0.117 0.883 35 H 0.185 0.815 36 H 0.147 0.853 37 H 0.388 0.612 38 H -0.295 1.295 39 H -0.283 1.283 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.278 -0.218 -2.825 2.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.108 5.108 4 C -0.199 4.199 5 C 0.392 3.608 6 O -0.436 6.436 7 N -0.362 5.362 8 C -0.011 4.011 9 C 0.058 3.942 10 F -0.182 7.182 11 C -0.168 4.168 12 C -0.132 4.132 13 H 0.102 0.898 14 C 0.006 3.994 15 O -0.408 6.408 16 C -0.180 4.180 17 C -0.212 4.212 18 C -0.138 4.138 19 C -0.155 4.155 20 O -0.345 6.345 21 Si 0.688 3.312 22 H 0.118 0.882 23 H 0.118 0.882 24 H 0.137 0.863 25 H 0.248 0.752 26 H 0.123 0.877 27 H 0.098 0.902 28 H 0.148 0.852 29 H 0.108 0.892 30 H 0.084 0.916 31 H 0.079 0.921 32 H 0.247 0.753 33 H 0.091 0.909 34 H 0.135 0.865 35 H 0.202 0.798 36 H 0.164 0.836 37 H 0.238 0.762 38 H -0.222 1.222 39 H -0.210 1.210 Dipole moment (debyes) X Y Z Total from point charges -0.278 -0.539 -2.280 2.360 hybrid contribution -0.685 0.444 0.607 1.017 sum -0.963 -0.095 -1.674 1.933 Atomic orbital electron populations 1.22612 0.70781 1.06742 1.05996 1.45709 1.08998 1.01928 1.48780 1.73494 1.02926 1.14898 1.19448 1.21801 0.90799 0.94606 1.12737 1.16982 0.86537 0.81701 0.75616 1.90790 1.23496 1.77607 1.51747 1.45681 1.11190 1.05067 1.74283 1.21954 0.88689 0.85610 1.04809 1.22212 0.89134 0.94471 0.88423 1.92845 1.64471 1.95482 1.65380 1.23561 0.97688 0.94444 1.01125 1.22479 0.98493 0.95719 0.96459 0.89772 1.22234 0.91633 0.93807 0.91684 1.86444 1.40737 1.66328 1.47326 1.23728 1.02825 0.96225 0.95235 1.21732 0.97517 0.93267 1.08704 1.22226 0.90987 0.92103 1.08463 1.24885 0.93442 0.91933 1.05264 1.86580 1.29327 1.88376 1.30238 0.93224 0.83823 0.74743 0.79379 0.88234 0.88153 0.86321 0.75159 0.87736 0.90222 0.85206 0.89195 0.91580 0.92134 0.75273 0.90924 0.86479 0.79794 0.83567 0.76217 1.22213 1.20999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.43 10.13 127.77 1.29 0.86 16 2 N -0.26 -0.39 3.70 -355.93 -1.32 -1.71 16 3 N -0.27 -1.62 11.67 -48.17 -0.56 -2.18 16 4 C -0.04 -0.31 7.13 42.46 0.30 -0.01 16 5 C 0.61 5.51 7.82 86.75 0.68 6.19 16 6 O -0.56 -7.82 16.93 -3.94 -0.07 -7.89 16 7 N -0.71 -3.23 5.46 -466.09 -2.55 -5.78 16 8 C 0.11 0.09 5.37 86.38 0.46 0.55 16 9 C 0.08 -0.02 1.67 -10.27 -0.02 -0.04 16 10 F -0.20 -1.13 16.79 44.97 0.76 -0.38 16 11 C -0.13 0.54 7.09 31.12 0.22 0.77 16 12 C -0.11 0.15 3.99 -10.27 -0.04 0.11 16 13 H 0.08 0.23 8.14 -2.39 -0.02 0.21 16 14 C 0.08 -0.29 6.88 71.98 0.50 0.21 16 15 O -0.60 -0.35 13.66 -148.98 -2.04 -2.39 16 16 C -0.14 0.20 7.08 31.12 0.22 0.42 16 17 C -0.18 -0.66 9.35 22.41 0.21 -0.45 16 18 C -0.01 0.00 6.18 41.40 0.26 0.25 16 19 C -0.05 0.20 2.87 71.24 0.20 0.40 16 20 O -0.54 2.32 10.40 -148.98 -1.55 0.77 16 21 Si 0.79 -2.84 31.24 68.60 2.14 -0.70 16 22 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 23 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 24 H 0.12 -0.88 6.77 -2.39 -0.02 -0.89 16 25 H 0.41 1.56 7.91 -92.71 -0.73 0.83 16 26 H 0.10 -0.17 7.95 -2.38 -0.02 -0.19 16 27 H 0.08 0.15 8.14 -2.39 -0.02 0.13 16 28 H 0.13 -1.15 8.06 -2.39 -0.02 -1.17 16 29 H 0.09 -0.34 8.14 -2.39 -0.02 -0.35 16 30 H 0.07 -0.44 7.84 -2.39 -0.02 -0.46 16 31 H 0.06 -0.34 8.14 -2.38 -0.02 -0.36 16 32 H 0.40 -3.16 9.12 -74.06 -0.68 -3.84 16 33 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 34 H 0.12 -0.52 7.72 -2.39 -0.02 -0.54 16 35 H 0.18 -0.05 7.03 -2.91 -0.02 -0.07 16 36 H 0.15 -1.09 7.96 -2.39 -0.02 -1.11 16 37 H 0.39 -3.30 8.70 -74.06 -0.64 -3.95 16 38 H -0.30 -0.91 7.11 99.48 0.71 -0.20 16 39 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 Total: 0.00 -22.50 335.66 -1.80 -24.30 By element: Atomic # 1 Polarization: -12.39 SS G_CDS: -0.91 Total: -13.29 kcal Atomic # 6 Polarization: 4.97 SS G_CDS: 4.29 Total: 9.26 kcal Atomic # 7 Polarization: -5.25 SS G_CDS: -4.43 Total: -9.67 kcal Atomic # 8 Polarization: -5.86 SS G_CDS: -3.65 Total: -9.51 kcal Atomic # 9 Polarization: -1.13 SS G_CDS: 0.76 Total: -0.38 kcal Atomic # 14 Polarization: -2.84 SS G_CDS: 2.14 Total: -0.70 kcal Total: -22.50 -1.80 -24.30 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16500592_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.513 kcal (2) G-P(sol) polarization free energy of solvation -22.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.300 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds