Wall clock time and date at job start Thu Mar 4 2021 17:49:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.35008 * 126.43185 * 210.02896 * 4 2 1 6 6 N 1.33581 * 108.65562 * 179.97438 * 5 4 2 7 7 C 1.32416 * 109.22467 * 359.97438 * 6 5 4 8 8 C 1.41248 * 132.11616 * 180.02562 * 7 6 5 9 9 Br 1.89098 * 120.25804 * 359.97438 * 8 7 6 10 10 C 1.35708 * 119.48622 * 179.29930 * 8 7 6 11 11 C 1.41763 * 119.53441 * 0.58610 * 10 8 7 12 12 C 1.47569 * 120.01244 * 179.60262 * 11 10 8 13 13 O 1.21593 * 120.00405 * 180.02562 * 12 11 10 14 14 N 1.34782 * 120.00092 * 0.02562 * 12 11 10 15 15 C 1.46502 * 120.00091 * 180.02562 * 14 12 11 16 16 C 1.52992 * 109.47138 * 180.02562 * 15 14 12 17 17 F 1.39904 * 112.85346 * 50.33301 * 16 15 14 18 18 C 1.53779 * 113.61605 * 181.53078 * 16 15 14 19 19 C 1.53784 * 87.08229 * 139.97957 * 18 16 15 20 20 H 1.08998 * 113.61285 * 219.93297 * 19 18 16 21 21 C 1.52997 * 113.61224 * 89.11734 * 19 18 16 22 22 O 1.42901 * 109.46998 * 174.99983 * 21 19 18 23 23 C 1.53780 * 113.61381 * 279.13615 * 16 15 14 24 24 C 1.36505 * 119.97729 * 359.61544 * 11 10 8 25 25 N 1.35947 * 120.50584 * 0.02562 * 24 11 10 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.07999 * 125.67148 * 359.94518 * 5 4 2 31 31 H 1.08001 * 120.23309 * 180.18349 * 10 8 7 32 32 H 0.96998 * 119.99812 * 0.02562 * 14 12 11 33 33 H 1.09003 * 109.47232 * 300.00651 * 15 14 12 34 34 H 1.09004 * 109.46862 * 60.00467 * 15 14 12 35 35 H 1.08997 * 113.61481 * 254.52767 * 18 16 15 36 36 H 1.09002 * 113.61607 * 25.43276 * 18 16 15 37 37 H 1.08998 * 109.47273 * 294.99485 * 21 19 18 38 38 H 1.08999 * 109.47170 * 55.00012 * 21 19 18 39 39 H 0.96699 * 114.00130 * 180.02562 * 22 21 19 40 40 H 1.09002 * 113.61844 * 334.57288 * 23 16 15 41 41 H 1.09005 * 113.61432 * 105.47312 * 23 16 15 42 42 H 1.07994 * 119.74442 * 179.97438 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0852 -0.4609 1.8854 6 7 3.1761 -1.2958 2.9242 7 6 2.1063 -2.0757 2.9517 8 6 1.7115 -3.1116 3.8269 9 35 2.8116 -3.5970 5.2863 10 6 0.5300 -3.7465 3.6205 11 6 -0.2837 -3.3690 2.5227 12 6 -1.5664 -4.0583 2.2832 13 8 -2.2640 -3.7347 1.3414 14 7 -1.9647 -5.0466 3.1086 15 6 -3.2378 -5.7313 2.8705 16 6 -3.4498 -6.8013 3.9432 17 9 -3.2715 -6.3118 5.2417 18 6 -4.7468 -7.6073 3.7616 19 6 -3.9397 -8.8497 4.1741 20 1 -4.1853 -9.7412 3.5972 21 6 -3.9317 -9.1020 5.6831 22 8 -3.2600 -10.3332 5.9566 23 6 -2.6886 -8.1089 3.6679 24 6 0.1198 -2.3678 1.6871 25 7 1.2998 -1.7266 1.8979 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 3.8139 0.2887 1.6142 31 1 0.2149 -4.5382 4.2840 32 1 -1.4084 -5.3045 3.8602 33 1 -4.0526 -5.0085 2.9127 34 1 -3.2193 -6.2010 1.8870 35 1 -5.5299 -7.3401 4.4710 36 1 -5.1005 -7.6389 2.7310 37 1 -3.4126 -8.2856 6.1852 38 1 -4.9574 -9.1590 6.0474 39 1 -3.2174 -10.5578 6.8962 40 1 -2.4785 -8.2778 2.6118 41 1 -1.8126 -8.2460 4.3020 42 1 -0.5029 -2.0836 0.8518 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16500644_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:49:28 Heat of formation + Delta-G solvation = -35.034343 kcal Electronic energy + Delta-G solvation = -30886.261837 eV Core-core repulsion = 26217.291930 eV Total energy + Delta-G solvation = -4668.969907 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.042 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -48.93317 -44.26470 -41.24125 -39.84379 -38.52965 -38.05109 -37.22283 -35.95768 -35.26548 -32.78476 -31.96207 -30.40966 -30.11628 -27.29505 -27.00127 -26.86214 -25.19091 -24.09670 -22.89745 -22.50697 -21.88594 -20.17650 -19.35972 -19.02054 -18.77558 -18.35220 -17.96937 -17.49992 -17.31685 -17.00112 -16.96347 -16.45519 -16.23661 -16.03034 -15.87565 -15.59828 -15.49282 -15.33686 -14.98229 -14.79096 -14.62528 -14.32535 -14.11390 -13.76310 -13.48587 -13.40873 -13.36693 -13.17607 -13.03378 -12.87780 -12.46487 -12.16538 -11.81254 -11.72393 -11.58447 -11.44148 -11.38995 -11.31170 -11.29122 -10.91954 -10.79555 -10.42086 -10.02511 -9.06794 -4.94698 -0.92887 -0.41485 0.16195 0.93371 1.14098 1.37650 1.63228 1.76367 1.84376 1.99152 2.17890 2.75560 2.92815 3.00322 3.06998 3.12310 3.22690 3.24323 3.35339 3.40323 3.49514 3.51440 3.89522 3.92037 4.10721 4.21835 4.28542 4.29671 4.38046 4.41554 4.43638 4.46951 4.56632 4.57301 4.67363 4.70435 4.87619 4.92676 4.95239 5.01778 5.14456 5.29501 5.29835 5.54468 6.14370 6.41824 6.46224 6.83098 6.83146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.055 4.055 3 Si 0.808 3.192 4 C -0.050 4.050 5 C 0.041 3.959 6 N -0.489 5.489 7 C 0.221 3.779 8 C -0.079 4.079 9 Br 0.008 6.992 10 C -0.028 4.028 11 C -0.176 4.176 12 C 0.583 3.417 13 O -0.562 6.562 14 N -0.708 5.708 15 C 0.113 3.887 16 C 0.078 3.922 17 F -0.194 7.194 18 C -0.133 4.133 19 C -0.118 4.118 20 H 0.093 0.907 21 C 0.082 3.918 22 O -0.594 6.594 23 C -0.144 4.144 24 C 0.169 3.831 25 N -0.360 5.360 26 H 0.407 0.593 27 H 0.111 0.889 28 H -0.271 1.271 29 H -0.308 1.308 30 H 0.231 0.769 31 H 0.180 0.820 32 H 0.413 0.587 33 H 0.080 0.920 34 H 0.104 0.896 35 H 0.089 0.911 36 H 0.128 0.872 37 H 0.055 0.945 38 H 0.056 0.944 39 H 0.397 0.603 40 H 0.117 0.883 41 H 0.080 0.920 42 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.782 -1.431 -2.601 3.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.162 4.162 3 Si 0.710 3.290 4 C -0.161 4.161 5 C -0.108 4.108 6 N -0.208 5.208 7 C -0.024 4.024 8 C -0.162 4.162 9 Br 0.093 6.907 10 C -0.054 4.054 11 C -0.183 4.183 12 C 0.369 3.631 13 O -0.441 6.441 14 N -0.360 5.360 15 C -0.011 4.011 16 C 0.060 3.940 17 F -0.175 7.175 18 C -0.171 4.171 19 C -0.136 4.136 20 H 0.111 0.889 21 C 0.004 3.996 22 O -0.402 6.402 23 C -0.181 4.181 24 C 0.042 3.958 25 N -0.033 5.033 26 H 0.259 0.741 27 H 0.129 0.871 28 H -0.197 1.197 29 H -0.236 1.236 30 H 0.247 0.753 31 H 0.197 0.803 32 H 0.251 0.749 33 H 0.098 0.902 34 H 0.122 0.878 35 H 0.108 0.892 36 H 0.146 0.854 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.247 0.753 40 H 0.135 0.865 41 H 0.098 0.902 42 H 0.207 0.793 Dipole moment (debyes) X Y Z Total from point charges -0.255 -0.833 -2.281 2.442 hybrid contribution -1.893 -0.045 -0.037 1.894 sum -2.148 -0.878 -2.318 3.280 Atomic orbital electron populations 1.86435 1.18117 1.81091 1.52039 1.24792 0.84377 1.12181 0.94876 0.93595 0.89454 0.69159 0.76797 1.21485 0.97359 0.95806 1.01425 1.23000 0.96700 1.00208 0.90896 1.70839 1.19996 1.07995 1.21982 1.20687 0.90156 1.00083 0.91509 1.20553 0.98302 0.99376 0.97944 1.96827 1.66617 1.90532 1.36742 1.21307 0.90273 0.98177 0.95621 1.19219 0.98334 1.01463 0.99329 1.17461 0.84096 0.79537 0.82004 1.90836 1.56029 1.65899 1.31372 1.45591 1.23250 1.36007 1.31161 1.21966 0.85659 0.94427 0.99017 1.22272 1.00849 0.92851 0.78056 1.92839 1.96245 1.89218 1.39162 1.23587 0.95265 0.92743 1.05481 1.22330 0.96986 0.98752 0.95541 0.88882 1.22141 0.96442 0.86113 0.94896 1.86406 1.80386 1.41044 1.32400 1.23720 0.97949 0.92235 1.04213 1.22173 0.84951 0.89719 0.98948 1.42730 1.14762 1.24509 1.21274 0.74083 0.87150 1.19651 1.23613 0.75254 0.80270 0.74891 0.90175 0.87786 0.89188 0.85378 0.92663 0.92600 0.75320 0.86495 0.90156 0.79291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.48 10.86 -148.98 -1.62 -1.13 16 2 C -0.05 0.17 3.05 71.24 0.22 0.39 16 3 Si 0.81 -4.28 31.18 68.60 2.14 -2.14 16 4 C -0.05 -0.16 6.28 41.01 0.26 0.10 16 5 C 0.04 0.11 10.44 83.68 0.87 0.98 16 6 N -0.49 -4.47 11.30 -194.11 -2.19 -6.66 16 7 C 0.22 1.88 7.59 134.18 1.02 2.90 16 8 C -0.08 -0.41 6.24 22.42 0.14 -0.27 16 9 Br 0.01 0.03 33.72 -20.37 -0.69 -0.66 16 10 C -0.03 -0.02 9.26 22.55 0.21 0.19 16 11 C -0.18 -0.50 5.84 -20.35 -0.12 -0.62 16 12 C 0.58 1.88 7.76 86.70 0.67 2.55 16 13 O -0.56 -5.42 16.27 -4.01 -0.07 -5.49 16 14 N -0.71 1.56 5.43 -466.22 -2.53 -0.97 16 15 C 0.11 -0.42 5.35 86.38 0.46 0.04 16 16 C 0.08 -0.38 1.63 -10.27 -0.02 -0.39 16 17 F -0.19 0.15 15.08 44.97 0.68 0.83 16 18 C -0.13 0.89 7.13 31.12 0.22 1.11 16 19 C -0.12 0.43 4.20 -10.21 -0.04 0.39 16 20 H 0.09 -0.26 8.14 -2.39 -0.02 -0.27 16 21 C 0.08 -0.16 6.65 71.98 0.48 0.32 16 22 O -0.59 -0.35 13.66 -148.98 -2.03 -2.39 16 23 C -0.14 0.73 7.08 31.18 0.22 0.95 16 24 C 0.17 0.87 9.91 83.65 0.83 1.70 16 25 N -0.36 -2.36 2.93 -337.71 -0.99 -3.35 16 26 H 0.41 -3.75 8.74 -74.06 -0.65 -4.39 16 27 H 0.11 -0.87 7.96 -2.39 -0.02 -0.89 16 28 H -0.27 0.64 7.11 99.48 0.71 1.34 16 29 H -0.31 -1.40 7.11 99.48 0.71 -0.70 16 30 H 0.23 -1.52 6.90 -2.91 -0.02 -1.54 16 31 H 0.18 -1.06 6.44 -2.91 -0.02 -1.07 16 32 H 0.41 -2.36 6.27 -92.71 -0.58 -2.94 16 33 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 34 H 0.10 -0.54 7.98 -2.38 -0.02 -0.56 16 35 H 0.09 -0.58 8.10 -2.39 -0.02 -0.60 16 36 H 0.13 -1.29 8.10 -2.39 -0.02 -1.31 16 37 H 0.06 -0.09 6.31 -2.39 -0.02 -0.10 16 38 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 39 H 0.40 -2.88 9.12 -74.06 -0.68 -3.56 16 40 H 0.12 -0.88 7.99 -2.39 -0.02 -0.89 16 41 H 0.08 -0.27 8.10 -2.38 -0.02 -0.29 16 42 H 0.19 0.96 6.18 -2.91 -0.02 0.94 16 Total: 0.00 -26.25 375.67 -2.62 -28.86 By element: Atomic # 1 Polarization: -16.52 SS G_CDS: -0.73 Total: -17.26 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: 5.42 Total: 10.35 kcal Atomic # 7 Polarization: -5.26 SS G_CDS: -5.71 Total: -10.98 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -3.72 Total: -9.01 kcal Atomic # 9 Polarization: 0.15 SS G_CDS: 0.68 Total: 0.83 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: 2.14 Total: -2.14 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.69 Total: -0.66 kcal Total: -26.25 -2.62 -28.86 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16500644_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.169 kcal (2) G-P(sol) polarization free energy of solvation -26.249 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.865 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds