Wall clock time and date at job start Thu Mar 4 2021 17:55:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45202 * 109.47319 * 2 1 4 4 C 1.34227 * 117.00403 * 179.97438 * 3 2 1 5 5 O 1.20823 * 119.99650 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00009 * 180.02562 * 4 3 2 7 7 H 1.09001 * 112.85049 * 311.19610 * 6 4 3 8 8 C 1.53779 * 113.61419 * 82.50386 * 6 4 3 9 9 C 1.53784 * 87.08045 * 139.98099 * 8 6 4 10 10 F 1.39898 * 113.61310 * 220.02256 * 9 8 6 11 11 C 1.52992 * 113.61673 * 89.11647 * 9 8 6 12 12 N 1.46503 * 109.47166 * 87.50094 * 11 9 8 13 13 C 1.34773 * 120.00036 * 180.02562 * 12 11 9 14 14 O 1.21573 * 120.00165 * 0.02562 * 13 12 11 15 15 C 1.47710 * 120.00071 * 179.97438 * 13 12 11 16 16 N 1.31811 * 126.51801 * 359.69226 * 15 13 12 17 17 N 1.28471 * 110.07411 * 179.81702 * 16 15 13 18 18 C 1.46495 * 124.88490 * 180.20364 * 17 16 15 19 19 C 1.35033 * 110.22702 * 0.45630 * 17 16 15 20 20 C 1.50701 * 126.38412 * 179.75056 * 19 17 16 21 21 O 1.42903 * 109.46789 * 329.99620 * 20 19 17 22 22 Si 1.86304 * 109.47269 * 210.00047 * 20 19 17 23 23 C 1.35364 * 107.23471 * 359.72335 * 19 17 16 24 24 C 1.53779 * 113.61123 * 180.02562 * 6 4 3 25 25 H 1.09004 * 109.47052 * 179.97438 * 1 2 3 26 26 H 1.08999 * 109.47709 * 300.00179 * 1 2 3 27 27 H 1.09001 * 109.47288 * 60.00270 * 1 2 3 28 28 H 1.09000 * 109.47437 * 240.00289 * 2 1 3 29 29 H 1.09001 * 109.47288 * 119.99730 * 2 1 3 30 30 H 1.09002 * 113.61557 * 25.43210 * 8 6 4 31 31 H 1.09004 * 113.61501 * 254.52631 * 8 6 4 32 32 H 1.08996 * 109.47544 * 207.50317 * 11 9 8 33 33 H 1.09007 * 109.47088 * 327.50753 * 11 9 8 34 34 H 0.97004 * 120.00029 * 0.02562 * 12 11 9 35 35 H 1.08998 * 109.47330 * 270.29085 * 18 17 16 36 36 H 1.09004 * 109.47384 * 30.28757 * 18 17 16 37 37 H 1.09001 * 109.47428 * 150.28641 * 18 17 16 38 38 H 1.08995 * 109.47382 * 89.99307 * 20 19 17 39 39 H 0.96705 * 114.00315 * 299.99879 * 21 20 19 40 40 H 1.48501 * 110.00026 * 179.97438 * 22 20 19 41 41 H 1.48498 * 109.99739 * 301.31562 * 22 20 19 42 42 H 1.07996 * 127.24920 * 179.97438 * 23 19 17 43 43 H 1.08997 * 113.61646 * 105.47284 * 24 6 4 44 44 H 1.08998 * 113.69354 * 334.57592 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9207 2.9375 0.0012 7 1 3.4714 3.5817 -0.7546 8 6 3.9857 3.5766 1.3983 9 6 5.3561 4.1423 0.9896 10 9 6.3086 4.0978 2.0132 11 6 5.2762 5.5104 0.3094 12 7 5.3024 6.5639 1.3270 13 6 5.2420 7.8588 0.9581 14 8 5.1652 8.1525 -0.2191 15 6 5.2679 8.9211 1.9842 16 7 5.3415 8.7496 3.2890 17 7 5.3464 9.8883 3.8838 18 6 5.4237 10.0754 5.3347 19 6 5.2645 10.8878 2.9795 20 6 5.2370 12.3644 3.2791 21 8 4.6282 12.5805 4.5538 22 14 4.2550 13.2467 1.9644 23 6 5.2122 10.3161 1.7536 24 6 5.4582 2.9681 0.0011 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5138 -0.8900 28 1 1.8934 -0.5138 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 4.0376 2.8497 2.2090 31 1 3.2286 4.3431 1.5636 32 1 6.1261 5.6325 -0.3620 33 1 4.3497 5.5791 -0.2609 34 1 5.3633 6.3296 2.2664 35 1 4.4173 10.0907 5.7532 36 1 5.9887 9.2550 5.7773 37 1 5.9225 11.0196 5.5533 38 1 6.2558 12.7514 3.2928 39 1 3.7178 12.2601 4.6143 40 1 4.2199 14.7038 2.2488 41 1 4.8596 13.0036 0.6300 42 1 5.1423 10.8188 0.8003 43 1 5.8894 3.2437 -0.9613 44 1 5.9141 2.0754 0.4292 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16501616_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:55:23 Heat of formation + Delta-G solvation = -91.477953 kcal Electronic energy + Delta-G solvation = -29573.552784 eV Core-core repulsion = 25024.185771 eV Total energy + Delta-G solvation = -4549.367013 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.147 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -48.84063 -43.85876 -41.90942 -40.62427 -39.39410 -38.00961 -37.61580 -35.65095 -34.40340 -32.72971 -32.62861 -29.98485 -28.36021 -27.18389 -26.93551 -26.30793 -24.17975 -23.71890 -22.26798 -22.19568 -21.08969 -20.26897 -19.30584 -19.05757 -18.09143 -17.71843 -17.67867 -17.58572 -17.24433 -16.95509 -16.62683 -16.48263 -16.00162 -15.90388 -15.73808 -15.47678 -15.33585 -15.05339 -14.81987 -14.73684 -14.38299 -14.02298 -13.95928 -13.68074 -13.62671 -13.45928 -13.43939 -12.99524 -12.67645 -12.61059 -12.54441 -12.44180 -12.36964 -12.22372 -11.84785 -11.58645 -11.56549 -11.44260 -11.35562 -10.91751 -10.40948 -10.08081 -9.98060 -4.95612 0.40947 0.80258 1.00688 1.19919 1.54226 1.56382 1.71736 1.92717 2.01756 2.24950 2.86807 3.02714 3.08187 3.19566 3.24628 3.31568 3.35249 3.49416 3.83478 3.96275 3.98837 4.02983 4.17211 4.25663 4.30492 4.31109 4.36479 4.41427 4.45748 4.48939 4.55558 4.61496 4.64910 4.68331 4.74696 4.77760 4.83449 4.89043 5.08302 5.12946 5.15977 5.22708 5.40508 5.66659 6.25006 6.57837 6.60728 6.78422 7.01854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.357 6.357 4 C 0.474 3.526 5 O -0.537 6.537 6 C -0.103 4.103 7 H 0.163 0.837 8 C -0.129 4.129 9 C 0.087 3.913 10 F -0.203 7.203 11 C 0.118 3.882 12 N -0.708 5.708 13 C 0.608 3.392 14 O -0.562 6.562 15 C -0.039 4.039 16 N -0.262 5.262 17 N -0.258 5.258 18 C 0.077 3.923 19 C -0.006 4.006 20 C -0.036 4.036 21 O -0.543 6.543 22 Si 0.791 3.209 23 C -0.195 4.195 24 C -0.130 4.130 25 H 0.095 0.905 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.098 0.902 31 H 0.116 0.884 32 H 0.086 0.914 33 H 0.112 0.888 34 H 0.416 0.584 35 H 0.111 0.889 36 H 0.097 0.903 37 H 0.115 0.885 38 H 0.127 0.873 39 H 0.398 0.602 40 H -0.283 1.283 41 H -0.290 1.290 42 H 0.162 0.838 43 H 0.113 0.887 44 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.890 1.934 4.149 7.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.274 6.274 4 C 0.318 3.682 5 O -0.427 6.427 6 C -0.122 4.122 7 H 0.180 0.820 8 C -0.167 4.167 9 C 0.068 3.932 10 F -0.184 7.184 11 C -0.006 4.006 12 N -0.361 5.361 13 C 0.394 3.606 14 O -0.439 6.439 15 C -0.196 4.196 16 N -0.100 5.100 17 N -0.047 5.047 18 C -0.062 4.062 19 C -0.132 4.132 20 C -0.147 4.147 21 O -0.351 6.351 22 Si 0.695 3.305 23 C -0.224 4.224 24 C -0.168 4.168 25 H 0.114 0.886 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.117 0.883 31 H 0.135 0.865 32 H 0.105 0.895 33 H 0.130 0.870 34 H 0.252 0.748 35 H 0.129 0.871 36 H 0.116 0.884 37 H 0.134 0.866 38 H 0.144 0.856 39 H 0.249 0.751 40 H -0.209 1.209 41 H -0.217 1.217 42 H 0.180 0.820 43 H 0.131 0.869 44 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -5.087 1.842 3.818 6.621 hybrid contribution 1.002 -0.299 0.031 1.046 sum -4.084 1.543 3.848 5.820 Atomic orbital electron populations 1.21828 0.90653 1.04263 1.03810 1.23270 0.96952 0.79279 1.02519 1.86520 1.24030 1.33519 1.83323 1.23788 0.80638 0.92640 0.71117 1.90685 1.61209 1.44160 1.46642 1.22472 0.96753 0.90681 1.02245 0.81962 1.23615 0.96401 1.01166 0.95489 1.22490 0.87998 0.95581 0.87098 1.92863 1.66727 1.97392 1.61387 1.21809 1.05640 0.82524 0.90616 1.45599 1.74112 1.04650 1.11693 1.16938 0.75592 0.81742 0.86347 1.90803 1.51636 1.83070 1.18411 1.21707 1.12733 0.94561 0.90640 1.73501 1.19138 1.10284 1.07082 1.45723 1.48063 1.01547 1.09418 1.22669 1.06527 1.05755 0.71234 1.22150 1.07959 0.93949 0.89108 1.24828 1.04492 0.89446 0.95957 1.86482 1.33777 1.84208 1.30629 0.93171 0.87834 0.76424 0.73099 1.21625 1.09727 0.92366 0.98638 1.23622 0.93929 0.97711 1.01528 0.88614 0.91186 0.91174 0.91340 0.91424 0.88301 0.86544 0.89538 0.86958 0.74771 0.87070 0.88406 0.86638 0.85605 0.75098 1.20949 1.21705 0.82006 0.86859 0.88233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.02 6.19 71.98 0.45 0.47 16 3 O -0.36 -0.87 10.22 -51.38 -0.53 -1.40 16 4 C 0.47 1.53 7.48 71.24 0.53 2.06 16 5 O -0.54 -5.35 15.65 21.97 0.34 -5.01 16 6 C -0.10 0.37 3.91 -11.01 -0.04 0.33 16 7 H 0.16 -1.46 7.72 -2.39 -0.02 -1.48 16 8 C -0.13 0.56 7.06 31.12 0.22 0.78 16 9 C 0.09 -0.19 1.91 -10.25 -0.02 -0.21 16 10 F -0.20 -0.71 16.61 44.97 0.75 0.04 16 11 C 0.12 -0.18 5.27 86.38 0.45 0.27 16 12 N -0.71 -1.51 5.45 -466.11 -2.54 -4.05 16 13 C 0.61 4.70 7.82 86.75 0.68 5.38 16 14 O -0.56 -7.59 16.93 -3.95 -0.07 -7.66 16 15 C -0.04 -0.25 7.13 42.46 0.30 0.05 16 16 N -0.26 -1.02 11.67 -48.17 -0.56 -1.58 16 17 N -0.26 0.15 3.70 -355.93 -1.32 -1.17 16 18 C 0.08 -0.61 10.12 127.77 1.29 0.68 16 19 C -0.01 0.00 6.18 41.40 0.26 0.26 16 20 C -0.04 0.18 2.87 71.24 0.20 0.38 16 21 O -0.54 4.21 10.40 -148.98 -1.55 2.66 16 22 Si 0.79 -3.44 31.37 68.60 2.15 -1.29 16 23 C -0.20 -0.85 9.35 22.41 0.21 -0.64 16 24 C -0.13 0.30 6.89 31.13 0.21 0.51 16 25 H 0.10 -0.65 8.14 -2.38 -0.02 -0.67 16 26 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 27 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 28 H 0.07 0.06 8.13 -2.39 -0.02 0.04 16 29 H 0.07 0.06 8.13 -2.39 -0.02 0.04 16 30 H 0.10 -0.26 8.09 -2.39 -0.02 -0.28 16 31 H 0.12 -0.87 8.10 -2.39 -0.02 -0.89 16 32 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 33 H 0.11 -0.52 7.39 -2.38 -0.02 -0.54 16 34 H 0.42 0.34 7.75 -92.70 -0.72 -0.38 16 35 H 0.11 -1.37 8.14 -2.39 -0.02 -1.39 16 36 H 0.10 -0.82 8.14 -2.38 -0.02 -0.84 16 37 H 0.12 -1.05 6.77 -2.39 -0.02 -1.06 16 38 H 0.13 -0.60 7.96 -2.39 -0.02 -0.61 16 39 H 0.40 -5.96 8.70 -74.05 -0.64 -6.60 16 40 H -0.28 -0.40 7.11 99.48 0.71 0.31 16 41 H -0.29 -0.72 6.83 99.48 0.68 -0.04 16 42 H 0.16 0.72 6.84 -2.91 -0.02 0.70 16 43 H 0.11 -0.61 8.10 -2.39 -0.02 -0.63 16 44 H 0.10 0.19 7.44 -2.39 -0.02 0.17 16 Total: 0.00 -24.50 378.39 1.88 -22.63 By element: Atomic # 1 Polarization: -14.55 SS G_CDS: -0.30 Total: -14.85 kcal Atomic # 6 Polarization: 6.19 SS G_CDS: 5.49 Total: 11.68 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -4.42 Total: -6.81 kcal Atomic # 8 Polarization: -9.61 SS G_CDS: -1.80 Total: -11.41 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.75 Total: 0.04 kcal Atomic # 14 Polarization: -3.44 SS G_CDS: 2.15 Total: -1.29 kcal Total: -24.50 1.88 -22.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16501616_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.851 kcal (2) G-P(sol) polarization free energy of solvation -24.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.627 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.478 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds