Wall clock time and date at job start Thu Mar 4 2021 13:38:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28465 * 124.88676 * 2 1 4 4 C 1.31802 * 110.07377 * 179.97438 * 3 2 1 5 5 C 1.47718 * 126.51849 * 180.02562 * 4 3 2 6 6 O 1.21566 * 119.99998 * 180.02562 * 5 4 3 7 7 N 1.34771 * 119.99721 * 0.02579 * 5 4 3 8 8 C 1.46499 * 119.99903 * 180.02562 * 7 5 4 9 9 H 1.09000 * 112.84849 * 336.19231 * 8 7 5 10 10 C 1.53779 * 113.61746 * 107.50534 * 8 7 5 11 11 C 1.53779 * 87.08402 * 89.11614 * 10 8 7 12 12 H 1.09002 * 113.61557 * 270.88569 * 11 10 8 13 13 C 1.52994 * 113.61529 * 139.98073 * 11 10 8 14 14 O 1.42904 * 109.47002 * 87.50160 * 13 11 10 15 15 C 1.35899 * 117.00056 * 179.97438 * 14 13 11 16 16 C 1.38734 * 120.05532 * 359.73177 * 15 14 13 17 17 C 1.38151 * 119.94389 * 179.69305 * 16 15 14 18 18 C 1.38269 * 120.05081 * 0.59839 * 17 16 15 19 19 C 1.38267 * 120.11259 * 359.67997 * 18 17 16 20 20 C 1.38138 * 120.05693 * 0.02562 * 19 18 17 21 21 C 1.53784 * 87.08045 * 25.43458 * 11 10 8 22 22 C 1.41505 * 106.96786 * 0.26579 * 4 3 2 23 23 C 1.35041 * 124.88194 * 180.02562 * 2 1 3 24 24 C 1.50697 * 126.38489 * 0.02562 * 23 2 1 25 25 O 1.42903 * 109.47505 * 29.99445 * 24 23 2 26 26 Si 1.86297 * 109.46982 * 149.99906 * 24 23 2 27 27 H 1.08998 * 109.47065 * 89.97352 * 1 2 3 28 28 H 1.09001 * 109.47015 * 209.97360 * 1 2 3 29 29 H 1.09007 * 109.47206 * 329.97220 * 1 2 3 30 30 H 0.97001 * 120.00748 * 0.02562 * 7 5 4 31 31 H 1.09006 * 113.61280 * 203.66438 * 10 8 7 32 32 H 1.09007 * 113.61383 * 334.56407 * 10 8 7 33 33 H 1.08994 * 109.47510 * 207.50031 * 13 11 10 34 34 H 1.09001 * 109.47575 * 327.50582 * 13 11 10 35 35 H 1.07996 * 120.02914 * 359.97438 * 16 15 14 36 36 H 1.07993 * 119.97272 * 180.32052 * 17 16 15 37 37 H 1.08000 * 119.94198 * 179.69632 * 18 17 16 38 38 H 1.08003 * 119.96641 * 180.02562 * 19 18 17 39 39 H 1.08003 * 120.02550 * 179.97438 * 20 19 18 40 40 H 1.09004 * 113.61451 * 220.02152 * 21 11 10 41 41 H 1.08994 * 113.61477 * 89.11454 * 21 11 10 42 42 H 1.07987 * 127.25312 * 179.73554 * 22 4 3 43 43 H 1.09002 * 109.46733 * 269.99361 * 24 23 2 44 44 H 0.96695 * 114.00056 * 180.02562 * 25 24 23 45 45 H 1.48503 * 109.99895 * 299.99391 * 26 24 23 46 46 H 1.48495 * 110.00175 * 61.31621 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7168 0.0006 5 6 4.6273 1.6398 0.0013 6 8 5.7597 1.1976 0.0013 7 7 4.4242 2.9721 0.0019 8 6 5.5680 3.8875 0.0021 9 1 6.4727 3.4342 0.4071 10 6 5.7838 4.6039 -1.3414 11 6 4.8391 5.6993 -0.8194 12 1 3.7888 5.5136 -1.0442 13 6 5.2844 7.1171 -1.1834 14 8 4.7589 7.4671 -2.4654 15 6 5.0627 8.7037 -2.9401 16 6 5.8458 9.5647 -2.1851 17 6 6.1586 10.8189 -2.6727 18 6 5.6815 11.2208 -3.9066 19 6 4.8960 10.3667 -4.6585 20 6 4.5855 9.1093 -4.1780 21 6 5.2512 5.2692 0.5984 22 6 3.5272 -0.6972 -0.0053 23 6 2.2373 -1.1078 -0.0005 24 6 1.7533 -2.5349 -0.0017 25 8 0.4955 -2.6109 -0.6757 26 14 2.9947 -3.6109 -0.8802 27 1 -0.3633 0.0005 -1.0276 28 1 -0.3633 -0.8902 0.5134 29 1 -0.3634 0.8898 0.5143 30 1 3.5206 3.3250 0.0023 31 1 6.8074 4.9464 -1.4941 32 1 5.3875 4.0566 -2.1967 33 1 4.9137 7.8177 -0.4352 34 1 6.3732 7.1597 -1.2131 35 1 6.2145 9.2531 -1.2190 36 1 6.7725 11.4876 -2.0876 37 1 5.9230 12.2035 -4.2839 38 1 4.5250 10.6829 -5.6222 39 1 3.9716 8.4427 -4.7655 40 1 4.4247 5.2589 1.3091 41 1 6.1290 5.7934 0.9759 42 1 4.4107 -1.3181 -0.0106 43 1 1.6364 -2.8797 1.0257 44 1 0.1232 -3.5025 -0.7143 45 1 3.1632 -3.1511 -2.2822 46 1 4.2984 -3.5656 -0.1707 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16534226_13259642.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:38:39 Heat of formation + Delta-G solvation = 34.490702 kcal Electronic energy + Delta-G solvation = -28632.280183 eV Core-core repulsion = 24491.833327 eV Total energy + Delta-G solvation = -4140.446856 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -43.99350 -41.54404 -40.89281 -39.49161 -38.13098 -37.90136 -34.88860 -34.34197 -32.85014 -32.03476 -31.08624 -29.41813 -28.43981 -26.83072 -26.78289 -25.11699 -24.07887 -23.34870 -22.57315 -22.37153 -21.09813 -20.38247 -19.22154 -18.63067 -18.39970 -17.85734 -17.51799 -17.31021 -16.99055 -16.90442 -16.75844 -16.18062 -15.82191 -15.75650 -15.45498 -15.29277 -15.13235 -15.00435 -14.67936 -14.37280 -14.13969 -14.00678 -13.73615 -13.57428 -13.52131 -13.46825 -13.18360 -13.01959 -12.53259 -12.20444 -12.18258 -12.11919 -12.09606 -11.76201 -11.68611 -11.50406 -11.25503 -10.95981 -10.44550 -10.16627 -9.99565 -9.96949 -9.20635 -5.04023 0.25926 0.35009 0.45305 0.63604 1.16626 1.49600 1.65780 1.91776 2.03346 2.09124 2.15784 2.80825 3.00865 3.08899 3.33672 3.44883 3.50480 3.69520 3.73747 3.87560 3.88347 3.95035 4.18426 4.20241 4.25617 4.28057 4.28916 4.33836 4.38453 4.40229 4.46206 4.47074 4.52285 4.59760 4.66624 4.67748 4.70499 4.75335 4.92742 4.96177 5.01394 5.04288 5.05737 5.31643 5.42908 5.44915 5.55079 5.57422 5.82828 6.20996 6.43200 6.64531 6.82430 6.93529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.257 5.257 3 N -0.260 5.260 4 C -0.038 4.038 5 C 0.607 3.393 6 O -0.568 6.568 7 N -0.688 5.688 8 C 0.109 3.891 9 H 0.096 0.904 10 C -0.145 4.145 11 C -0.104 4.104 12 H 0.097 0.903 13 C 0.066 3.934 14 O -0.332 6.332 15 C 0.111 3.889 16 C -0.218 4.218 17 C -0.088 4.088 18 C -0.168 4.168 19 C -0.087 4.087 20 C -0.175 4.175 21 C -0.116 4.116 22 C -0.217 4.217 23 C 0.029 3.971 24 C -0.043 4.043 25 O -0.558 6.558 26 Si 0.811 3.189 27 H 0.093 0.907 28 H 0.125 0.875 29 H 0.103 0.897 30 H 0.415 0.585 31 H 0.103 0.897 32 H 0.056 0.944 33 H 0.077 0.923 34 H 0.075 0.925 35 H 0.143 0.857 36 H 0.145 0.855 37 H 0.142 0.858 38 H 0.146 0.854 39 H 0.129 0.871 40 H 0.091 0.909 41 H 0.121 0.879 42 H 0.155 0.845 43 H 0.120 0.880 44 H 0.416 0.584 45 H -0.313 1.313 46 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.336 -2.432 3.161 7.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.046 5.046 3 N -0.098 5.098 4 C -0.196 4.196 5 C 0.392 3.608 6 O -0.446 6.446 7 N -0.338 5.338 8 C 0.004 3.996 9 H 0.114 0.886 10 C -0.184 4.184 11 C -0.122 4.122 12 H 0.115 0.885 13 C -0.008 4.008 14 O -0.247 6.247 15 C 0.066 3.934 16 C -0.237 4.237 17 C -0.106 4.106 18 C -0.186 4.186 19 C -0.105 4.105 20 C -0.194 4.194 21 C -0.153 4.153 22 C -0.245 4.245 23 C -0.096 4.096 24 C -0.153 4.153 25 O -0.370 6.370 26 Si 0.716 3.284 27 H 0.112 0.888 28 H 0.144 0.856 29 H 0.122 0.878 30 H 0.252 0.748 31 H 0.121 0.879 32 H 0.074 0.926 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.161 0.839 36 H 0.163 0.837 37 H 0.160 0.840 38 H 0.164 0.836 39 H 0.147 0.853 40 H 0.110 0.890 41 H 0.139 0.861 42 H 0.173 0.827 43 H 0.138 0.862 44 H 0.269 0.731 45 H -0.241 1.241 46 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges -5.670 -1.373 2.622 6.396 hybrid contribution 0.353 0.088 0.048 0.367 sum -5.317 -1.285 2.670 6.087 Atomic orbital electron populations 1.22612 0.69875 1.06899 1.05881 1.45805 1.09428 1.01527 1.47834 1.73448 1.02336 1.14760 1.19275 1.21744 0.91251 0.93916 1.12680 1.16987 0.86197 0.82216 0.75379 1.90777 1.23927 1.77812 1.52040 1.45437 1.10826 1.04286 1.73298 1.21980 0.89628 0.89892 0.98062 0.88550 1.23537 1.01017 0.96930 0.96912 1.22577 1.00545 0.91877 0.97204 0.88511 1.23006 0.98946 0.96381 0.82481 1.86056 1.71806 1.29967 1.36825 1.19272 0.95426 0.84704 0.94022 1.21516 1.03894 0.96139 1.02102 1.21328 0.97917 0.95381 0.95950 1.21434 1.00299 1.01232 0.95681 1.21291 0.96496 0.92370 1.00325 1.20700 1.05011 0.98391 0.95273 1.23289 1.04058 0.92828 0.95161 1.21520 0.97130 0.94148 1.11679 1.21465 0.90257 0.91325 1.06571 1.24370 0.95374 0.91547 1.04059 1.86353 1.33808 1.37843 1.78972 0.94609 0.75433 0.83667 0.74642 0.88824 0.85630 0.87821 0.74753 0.87892 0.92560 0.90449 0.90709 0.83946 0.83739 0.84011 0.83578 0.85306 0.89031 0.86112 0.82740 0.86224 0.73053 1.24135 1.22081 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.35 10.12 127.77 1.29 0.95 16 2 N -0.26 -1.21 3.70 -355.91 -1.32 -2.52 16 3 N -0.26 -2.25 11.67 -48.17 -0.56 -2.81 16 4 C -0.04 -0.46 7.13 42.46 0.30 -0.16 16 5 C 0.61 7.96 7.82 86.75 0.68 8.63 16 6 O -0.57 -11.21 16.52 -3.93 -0.06 -11.27 16 7 N -0.69 -4.11 5.26 -443.03 -2.33 -6.44 16 8 C 0.11 0.32 4.32 45.52 0.20 0.52 16 9 H 0.10 0.57 7.46 -2.39 -0.02 0.55 16 10 C -0.15 -0.35 7.43 31.12 0.23 -0.12 16 11 C -0.10 0.09 3.89 -10.27 -0.04 0.05 16 12 H 0.10 0.04 8.14 -2.39 -0.02 0.02 16 13 C 0.07 -0.01 4.58 71.98 0.33 0.32 16 14 O -0.33 -2.18 10.14 -92.42 -0.94 -3.12 16 15 C 0.11 0.74 6.69 22.51 0.15 0.89 16 16 C -0.22 -0.73 9.04 22.37 0.20 -0.53 16 17 C -0.09 -0.17 10.04 22.26 0.22 0.06 16 18 C -0.17 -0.34 10.04 22.28 0.22 -0.12 16 19 C -0.09 -0.27 10.04 22.25 0.22 -0.05 16 20 C -0.18 -1.08 9.99 22.36 0.22 -0.86 16 21 C -0.12 0.42 7.39 31.12 0.23 0.65 16 22 C -0.22 -2.34 9.35 22.41 0.21 -2.13 16 23 C 0.03 0.15 6.22 41.40 0.26 0.41 16 24 C -0.04 0.19 2.86 71.23 0.20 0.40 16 25 O -0.56 4.53 10.38 -148.98 -1.55 2.98 16 26 Si 0.81 -2.40 31.30 68.60 2.15 -0.25 16 27 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 28 H 0.13 -1.01 6.77 -2.39 -0.02 -1.03 16 29 H 0.10 -0.66 8.14 -2.38 -0.02 -0.68 16 30 H 0.42 1.11 8.43 -92.71 -0.78 0.33 16 31 H 0.10 0.06 7.90 -2.38 -0.02 0.04 16 32 H 0.06 0.37 8.14 -2.38 -0.02 0.35 16 33 H 0.08 -0.22 7.65 -2.39 -0.02 -0.23 16 34 H 0.07 -0.16 7.38 -2.39 -0.02 -0.18 16 35 H 0.14 -0.14 6.30 -2.91 -0.02 -0.16 16 36 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 37 H 0.14 -0.32 8.06 -2.91 -0.02 -0.35 16 38 H 0.15 -0.21 8.06 -2.91 -0.02 -0.23 16 39 H 0.13 0.64 8.06 -2.91 -0.02 0.62 16 40 H 0.09 -0.46 8.14 -2.39 -0.02 -0.47 16 41 H 0.12 -0.86 8.10 -2.39 -0.02 -0.88 16 42 H 0.16 1.76 6.90 -2.92 -0.02 1.74 16 43 H 0.12 -1.21 7.96 -2.39 -0.02 -1.23 16 44 H 0.42 -7.82 8.74 -74.06 -0.65 -8.46 16 45 H -0.31 -2.31 7.11 99.48 0.71 -1.60 16 46 H -0.29 -1.22 6.94 99.48 0.69 -0.53 16 Total: 0.00 -27.94 386.49 0.14 -27.79 By element: Atomic # 1 Polarization: -12.87 SS G_CDS: -0.39 Total: -13.26 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 5.14 Total: 8.91 kcal Atomic # 7 Polarization: -7.57 SS G_CDS: -4.21 Total: -11.78 kcal Atomic # 8 Polarization: -8.86 SS G_CDS: -2.55 Total: -11.41 kcal Atomic # 14 Polarization: -2.40 SS G_CDS: 2.15 Total: -0.25 kcal Total: -27.94 0.14 -27.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16534226_13259642.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.285 kcal (2) G-P(sol) polarization free energy of solvation -27.938 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.346 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.794 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.491 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds