Wall clock time and date at job start Thu Mar 4 2021 13:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81404 * 1 3 3 O 1.42102 * 108.57839 * 2 1 4 4 O 1.42103 * 108.57879 * 228.98140 * 2 1 3 5 5 C 1.81396 * 101.92300 * 114.48979 * 2 1 3 6 6 C 1.52995 * 109.47343 * 179.97438 * 5 2 1 7 7 H 1.08998 * 112.85174 * 316.20107 * 6 5 2 8 8 C 1.53790 * 113.68657 * 87.46524 * 6 5 2 9 9 C 1.53781 * 87.07785 * 139.99546 * 8 6 5 10 10 H 1.09004 * 113.68763 * 220.00678 * 9 8 6 11 11 N 1.46499 * 113.61868 * 89.11640 * 9 8 6 12 12 C 1.34782 * 119.99981 * 107.49708 * 11 9 8 13 13 O 1.21593 * 119.99925 * 0.02562 * 12 11 9 14 14 C 1.47578 * 119.99846 * 180.02562 * 12 11 9 15 15 C 1.36495 * 120.00747 * 179.72972 * 14 12 11 16 16 N 1.35943 * 120.50172 * 180.27694 * 15 14 12 17 17 C 1.37003 * 132.40984 * 179.97438 * 16 15 14 18 18 C 1.50706 * 126.42718 * 359.97438 * 17 16 15 19 19 O 1.42904 * 109.46923 * 30.00091 * 18 17 16 20 20 Si 1.86295 * 109.47073 * 149.99967 * 18 17 16 21 21 C 1.35003 * 107.14570 * 180.02562 * 17 16 15 22 22 N 1.33589 * 108.65308 * 359.97438 * 21 17 16 23 23 C 1.32416 * 109.22616 * 359.97438 * 22 21 17 24 24 C 1.41248 * 132.12068 * 179.97438 * 23 22 21 25 25 Br 1.89098 * 120.25675 * 359.97438 * 24 23 22 26 26 C 1.35702 * 119.48850 * 180.02562 * 24 23 22 27 27 C 1.53778 * 113.61594 * 185.00028 * 6 5 2 28 28 H 1.08995 * 109.46669 * 305.51094 * 1 2 3 29 29 H 1.09002 * 109.46890 * 65.50634 * 1 2 3 30 30 H 1.08990 * 109.46866 * 185.51011 * 1 2 3 31 31 H 1.09002 * 109.46658 * 59.99967 * 5 2 1 32 32 H 1.08999 * 109.47086 * 300.00169 * 5 2 1 33 33 H 1.08998 * 113.61247 * 25.44761 * 8 6 5 34 34 H 1.09002 * 113.61365 * 254.54205 * 8 6 5 35 35 H 0.97000 * 120.00074 * 287.49984 * 11 9 8 36 36 H 1.07998 * 119.74990 * 0.25080 * 15 14 12 37 37 H 1.08999 * 109.47020 * 270.00180 * 18 17 16 38 38 H 0.96695 * 114.00110 * 179.97438 * 19 18 17 39 39 H 1.48507 * 110.00003 * 300.00284 * 20 18 17 40 40 H 1.48499 * 110.00068 * 61.31923 * 20 18 17 41 41 H 1.07997 * 125.67479 * 179.97438 * 21 17 16 42 42 H 1.07998 * 120.23451 * 180.02562 * 26 24 23 43 43 H 1.08999 * 113.61364 * 105.38728 * 27 6 5 44 44 H 1.09001 * 113.61185 * 334.48578 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3470 0.0000 4 8 2.2668 -0.8840 -1.0163 5 6 2.1888 -0.7357 1.6152 6 6 3.7055 -0.8196 1.7978 7 1 4.2201 -1.1777 0.9062 8 6 4.3268 0.4525 2.3985 9 6 5.2305 -0.4752 3.2277 10 1 5.3821 -0.1371 4.2528 11 7 6.4825 -0.8300 2.5547 12 6 7.6477 -0.2992 2.9756 13 8 7.6598 0.4738 3.9141 14 6 8.9088 -0.6562 2.2972 15 6 10.0883 -0.1145 2.7198 16 7 11.2551 -0.4320 2.0987 17 6 12.5511 -0.0424 2.3119 18 6 13.0358 0.9111 3.3736 19 8 12.1793 0.8288 4.5146 20 14 14.7740 0.4587 3.8680 21 6 13.3125 -0.6719 1.3919 22 7 12.5207 -1.4304 0.6287 23 6 11.2680 -1.3027 1.0382 24 6 10.0597 -1.8762 0.5840 25 35 10.0645 -3.0745 -0.8787 26 6 8.8952 -1.5597 1.2049 27 6 4.1317 -1.5418 3.0869 28 1 -0.3632 0.5969 0.8365 29 1 -0.3633 0.4261 -0.9352 30 1 -0.3633 -1.0228 0.0987 31 1 1.7611 -1.7370 1.6663 32 1 1.7611 -0.1172 2.4042 33 1 3.6304 1.0361 3.0007 34 1 4.8705 1.0574 1.6729 35 1 6.4728 -1.4469 1.8062 36 1 10.0945 0.5719 3.5536 37 1 13.0225 1.9282 2.9820 38 1 12.4323 1.4166 5.2395 39 1 14.8056 -0.9261 4.4036 40 1 15.6806 0.5711 2.6972 41 1 14.3835 -0.5780 1.2897 42 1 7.9645 -1.9915 0.8678 43 1 4.5179 -2.5468 2.9170 44 1 3.3820 -1.5033 3.8772 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16534690_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:39:14 Heat of formation + Delta-G solvation = -7.235677 kcal Electronic energy + Delta-G solvation = -32542.843631 eV Core-core repulsion = 27831.239435 eV Total energy + Delta-G solvation = -4711.604196 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.023 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.38938 -41.61222 -39.89511 -38.45005 -37.95654 -37.90877 -36.98873 -35.60529 -34.82910 -32.72137 -32.03407 -30.94965 -30.36095 -30.07418 -26.94666 -26.71906 -26.05037 -24.21739 -23.97208 -22.63918 -22.11616 -20.45529 -19.81022 -19.34321 -18.75597 -18.60283 -17.99991 -17.66429 -17.50589 -17.31152 -17.00512 -16.86295 -16.36163 -16.27347 -16.04077 -15.76885 -15.57119 -15.38239 -15.25790 -14.95862 -14.68370 -14.22109 -14.13666 -14.00201 -13.90597 -13.52381 -13.41870 -13.37308 -13.17099 -13.11045 -12.99660 -12.89287 -12.84604 -12.38215 -12.19672 -12.10486 -11.85999 -11.71086 -11.57049 -11.44633 -11.36058 -11.31356 -10.99492 -10.78334 -10.30385 -10.09464 -9.17292 -5.01020 -0.99505 -0.88941 -0.48750 0.09389 0.87381 1.04909 1.36961 1.61365 1.67169 1.87221 1.92689 2.01118 2.13093 2.65364 2.76994 2.94450 3.10310 3.12999 3.28000 3.33027 3.38287 3.46225 3.47378 3.65983 3.76855 3.81143 3.96329 4.09373 4.11473 4.20389 4.22770 4.27244 4.34583 4.41408 4.42265 4.53895 4.76149 4.81666 4.85136 4.86757 4.97150 4.99726 5.04638 5.07314 5.12155 5.44626 5.49639 6.23273 6.29712 6.73530 6.89941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.646 4.646 2 S 2.404 3.596 3 O -0.988 6.988 4 O -0.992 6.992 5 C -0.582 4.582 6 C -0.116 4.116 7 H 0.100 0.900 8 C -0.159 4.159 9 C 0.109 3.891 10 H 0.102 0.898 11 N -0.694 5.694 12 C 0.584 3.416 13 O -0.558 6.558 14 C -0.175 4.175 15 C 0.172 3.828 16 N -0.358 5.358 17 C -0.043 4.043 18 C -0.052 4.052 19 O -0.570 6.570 20 Si 0.824 3.176 21 C 0.017 3.983 22 N -0.494 5.494 23 C 0.224 3.776 24 C -0.085 4.085 25 Br 0.008 6.992 26 C -0.022 4.022 27 C -0.112 4.112 28 H 0.153 0.847 29 H 0.125 0.875 30 H 0.153 0.847 31 H 0.170 0.830 32 H 0.166 0.834 33 H 0.114 0.886 34 H 0.060 0.940 35 H 0.414 0.586 36 H 0.198 0.802 37 H 0.110 0.890 38 H 0.415 0.585 39 H -0.308 1.308 40 H -0.272 1.272 41 H 0.202 0.798 42 H 0.187 0.813 43 H 0.093 0.907 44 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.701 0.919 7.159 9.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.798 4.798 2 S 2.594 3.406 3 O -0.985 6.985 4 O -0.990 6.990 5 C -0.713 4.713 6 C -0.136 4.136 7 H 0.119 0.881 8 C -0.197 4.197 9 C 0.004 3.996 10 H 0.120 0.880 11 N -0.346 5.346 12 C 0.370 3.630 13 O -0.438 6.438 14 C -0.183 4.183 15 C 0.046 3.954 16 N -0.030 5.030 17 C -0.155 4.155 18 C -0.161 4.161 19 O -0.382 6.382 20 Si 0.726 3.274 21 C -0.132 4.132 22 N -0.213 5.213 23 C -0.021 4.021 24 C -0.167 4.167 25 Br 0.093 6.907 26 C -0.047 4.047 27 C -0.151 4.151 28 H 0.171 0.829 29 H 0.144 0.856 30 H 0.171 0.829 31 H 0.188 0.812 32 H 0.184 0.816 33 H 0.132 0.868 34 H 0.079 0.921 35 H 0.252 0.748 36 H 0.214 0.786 37 H 0.127 0.873 38 H 0.269 0.731 39 H -0.236 1.236 40 H -0.198 1.198 41 H 0.219 0.781 42 H 0.204 0.796 43 H 0.111 0.889 44 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -4.413 -0.073 5.444 7.008 hybrid contribution -0.950 0.175 0.273 1.004 sum -5.363 0.102 5.717 7.839 Atomic orbital electron populations 1.30158 1.22975 1.13761 1.12941 1.07877 0.79619 0.74541 0.78597 1.93558 1.80658 1.36782 1.87543 1.93552 1.80852 1.67637 1.56930 1.30156 1.03939 1.16274 1.20962 1.22458 0.92115 0.98664 1.00348 0.88145 1.23737 0.99433 0.96547 1.00023 1.22024 0.82337 0.97894 0.97331 0.88005 1.45457 1.05413 1.47624 1.36069 1.17444 0.83136 0.80029 0.82375 1.90832 1.87115 1.36319 1.29494 1.19309 0.93535 1.04306 1.01126 1.22301 0.82050 0.95696 0.95390 1.42734 1.06969 1.30577 1.22769 1.21704 0.81279 1.08082 1.04400 1.24741 1.06655 0.99523 0.85149 1.86322 1.55241 1.69161 1.27431 0.94099 0.69953 0.80744 0.82615 1.22683 1.00910 0.95965 0.93688 1.70783 0.98637 1.23963 1.27869 1.20739 0.94644 0.96221 0.90521 1.20565 0.91372 1.03803 1.00941 1.96829 1.99008 1.56890 1.37990 1.21399 0.98119 0.93540 0.91675 1.23343 0.96759 0.98164 0.96837 0.82900 0.85602 0.82881 0.81192 0.81614 0.86806 0.92102 0.74791 0.78560 0.87276 0.73095 1.23643 1.19811 0.78131 0.79616 0.88881 0.85702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 7.32 10.62 113.37 1.20 8.52 16 2 S 2.40 -10.05 5.35 -56.49 -0.30 -10.35 16 3 O -0.99 -5.36 18.10 -127.37 -2.31 -7.66 16 4 O -0.99 -5.17 18.10 -127.37 -2.31 -7.48 16 5 C -0.58 7.29 5.64 71.98 0.41 7.70 16 6 C -0.12 0.91 3.53 -10.27 -0.04 0.87 16 7 H 0.10 -0.69 8.13 -2.39 -0.02 -0.71 16 8 C -0.16 0.61 7.43 31.12 0.23 0.84 16 9 C 0.11 -0.47 4.32 45.52 0.20 -0.27 16 10 H 0.10 -0.16 7.46 -2.39 -0.02 -0.18 16 11 N -0.69 2.08 5.21 -443.13 -2.31 -0.23 16 12 C 0.58 1.84 7.76 86.71 0.67 2.52 16 13 O -0.56 -5.43 15.87 -4.01 -0.06 -5.49 16 14 C -0.18 -0.53 5.84 -20.35 -0.12 -0.65 16 15 C 0.17 0.97 9.91 83.65 0.83 1.80 16 16 N -0.36 -3.02 2.93 -337.71 -0.99 -4.01 16 17 C -0.04 -0.28 6.28 41.01 0.26 -0.02 16 18 C -0.05 0.13 3.05 71.24 0.22 0.34 16 19 O -0.57 1.72 10.88 -148.98 -1.62 0.10 16 20 Si 0.82 -3.93 31.28 68.60 2.15 -1.78 16 21 C 0.02 0.14 10.44 83.68 0.87 1.02 16 22 N -0.49 -6.62 11.30 -194.10 -2.19 -8.82 16 23 C 0.22 2.47 7.59 134.18 1.02 3.49 16 24 C -0.08 -0.55 6.24 22.42 0.14 -0.41 16 25 Br 0.01 0.04 33.72 -20.37 -0.69 -0.64 16 26 C -0.02 -0.02 9.26 22.55 0.21 0.19 16 27 C -0.11 1.17 7.39 31.12 0.23 1.40 16 28 H 0.15 -2.42 8.14 -2.39 -0.02 -2.44 16 29 H 0.13 -1.19 8.14 -2.39 -0.02 -1.21 16 30 H 0.15 -2.44 8.14 -2.40 -0.02 -2.46 16 31 H 0.17 -3.16 8.14 -2.39 -0.02 -3.18 16 32 H 0.17 -2.98 7.85 -2.39 -0.02 -3.00 16 33 H 0.11 -0.74 7.90 -2.39 -0.02 -0.76 16 34 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 35 H 0.41 -3.34 6.73 -92.71 -0.62 -3.96 16 36 H 0.20 0.93 6.19 -2.91 -0.02 0.91 16 37 H 0.11 -0.77 7.96 -2.39 -0.02 -0.79 16 38 H 0.42 -5.78 8.74 -74.06 -0.65 -6.42 16 39 H -0.31 -1.55 7.11 99.48 0.71 -0.84 16 40 H -0.27 0.31 6.91 99.48 0.69 1.00 16 41 H 0.20 0.75 6.77 -2.91 -0.02 0.73 16 42 H 0.19 -1.25 6.44 -2.91 -0.02 -1.27 16 43 H 0.09 -1.11 8.14 -2.39 -0.02 -1.13 16 44 H 0.12 -1.75 8.10 -2.39 -0.02 -1.77 16 Total: 0.00 -42.00 403.20 -4.47 -46.46 By element: Atomic # 1 Polarization: -27.27 SS G_CDS: -0.16 Total: -27.43 kcal Atomic # 6 Polarization: 21.01 SS G_CDS: 6.33 Total: 27.34 kcal Atomic # 7 Polarization: -7.56 SS G_CDS: -5.50 Total: -13.05 kcal Atomic # 8 Polarization: -14.24 SS G_CDS: -6.29 Total: -20.53 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.15 Total: -1.78 kcal Atomic # 16 Polarization: -10.05 SS G_CDS: -0.30 Total: -10.35 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.64 kcal Total: -42.00 -4.47 -46.46 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16534690_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.226 kcal (2) G-P(sol) polarization free energy of solvation -41.996 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.770 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds