Wall clock time and date at job start Thu Mar 4 2021 13:40:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42900 * 114.00106 * 2 1 4 4 C 1.52994 * 109.47357 * 180.02562 * 3 2 1 5 5 H 1.08997 * 112.85079 * 316.19806 * 4 3 2 6 6 C 1.53776 * 113.61555 * 87.50265 * 4 3 2 7 7 C 1.53777 * 87.08295 * 139.97972 * 6 4 3 8 8 H 1.08999 * 113.69251 * 220.00170 * 7 6 4 9 9 N 1.46506 * 113.60985 * 89.11830 * 7 6 4 10 10 C 1.34776 * 120.00154 * 107.50520 * 9 7 6 11 11 O 1.21570 * 119.99829 * 359.97438 * 10 9 7 12 12 C 1.47713 * 119.99944 * 179.97438 * 10 9 7 13 13 N 1.31807 * 126.51793 * 359.97438 * 12 10 9 14 14 N 1.28467 * 110.07154 * 180.02562 * 13 12 10 15 15 C 1.46499 * 124.88446 * 179.97438 * 14 13 12 16 16 C 1.35032 * 110.23213 * 359.97438 * 14 13 12 17 17 C 1.50699 * 126.38638 * 180.02562 * 16 14 13 18 18 O 1.42905 * 109.46972 * 330.00141 * 17 16 14 19 19 Si 1.86300 * 109.47350 * 210.00405 * 17 16 14 20 20 C 1.35363 * 107.22863 * 0.26784 * 16 14 13 21 21 C 1.53777 * 87.08069 * 334.57012 * 7 6 4 22 22 H 1.09000 * 109.47266 * 300.00117 * 1 2 3 23 23 H 1.09001 * 109.47207 * 60.00027 * 1 2 3 24 24 H 1.09006 * 109.46808 * 179.97438 * 1 2 3 25 25 H 1.09006 * 109.47051 * 59.99468 * 3 2 1 26 26 H 1.09003 * 109.47033 * 300.00519 * 3 2 1 27 27 H 1.09001 * 113.61410 * 25.43326 * 6 4 3 28 28 H 1.09007 * 113.61641 * 254.53326 * 6 4 3 29 29 H 0.97006 * 119.99829 * 287.49617 * 9 7 6 30 30 H 1.09005 * 109.46873 * 270.03713 * 15 14 13 31 31 H 1.08999 * 109.47479 * 30.02985 * 15 14 13 32 32 H 1.08992 * 109.47536 * 150.03361 * 15 14 13 33 33 H 1.09000 * 109.47247 * 90.00205 * 17 16 14 34 34 H 0.96705 * 113.99788 * 180.02562 * 18 17 16 35 35 H 1.48501 * 109.99793 * 59.99689 * 19 17 16 36 36 H 1.48494 * 110.00207 * 181.31742 * 19 17 16 37 37 H 1.08001 * 127.24877 * 179.69894 * 20 16 14 38 38 H 1.09002 * 113.61444 * 139.98284 * 21 7 6 39 39 H 1.09003 * 113.61251 * 270.87887 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9005 0.4285 0.6943 6 6 4.1441 1.0751 -1.4086 7 6 5.2671 1.9996 -0.9095 8 1 5.5797 2.7438 -1.6420 9 7 6.3953 1.2819 -0.3108 10 6 7.5675 1.1984 -0.9707 11 8 7.6885 1.7181 -2.0630 12 6 8.7052 0.4753 -0.3667 13 7 8.7166 -0.1318 0.8032 14 7 9.8692 -0.6579 1.0157 15 6 10.2383 -1.4100 2.2175 16 6 10.6916 -0.4178 -0.0281 17 6 12.1237 -0.8683 -0.1599 18 8 12.7169 -0.9553 1.1373 19 14 13.0686 0.3601 -1.1937 20 6 9.9916 0.3075 -0.9315 21 6 4.2604 2.5353 0.1221 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 1.6886 1.8464 0.8900 26 1 1.6886 1.8464 -0.8900 27 1 3.5255 1.5208 -2.1876 28 1 4.4848 0.0706 -1.6601 29 1 6.2987 0.8670 0.5607 30 1 10.6437 -0.7265 2.9636 31 1 9.3556 -1.9062 2.6209 32 1 10.9900 -2.1567 1.9622 33 1 12.1541 -1.8466 -0.6397 34 1 13.6411 -1.2400 1.1288 35 1 13.0345 1.6980 -0.5501 36 1 14.4744 -0.0890 -1.3577 37 1 10.3411 0.6787 -1.8837 38 1 4.6950 2.7098 1.1064 39 1 3.6736 3.3802 -0.2384 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16535612_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:40:32 Heat of formation + Delta-G solvation = -2.729731 kcal Electronic energy + Delta-G solvation = -21988.188013 eV Core-core repulsion = 18514.569339 eV Total energy + Delta-G solvation = -3473.618674 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -43.83555 -41.24547 -39.59810 -38.20463 -38.05068 -34.72637 -34.18199 -32.72210 -29.84429 -28.48199 -27.03968 -26.74757 -26.53892 -24.68295 -23.24389 -22.20006 -20.98065 -20.25865 -18.65193 -18.45988 -17.71763 -17.45522 -17.34569 -17.01256 -16.75063 -16.36370 -16.06874 -15.72500 -15.60084 -15.09710 -14.73847 -14.62226 -14.26018 -13.99639 -13.80208 -13.60813 -13.42249 -13.36216 -13.02880 -12.82747 -12.42749 -12.37511 -11.86988 -11.83462 -11.57777 -11.34896 -11.28112 -11.03092 -10.58374 -10.29545 -10.01242 -9.88488 -4.88671 0.41583 0.79962 1.26189 1.52686 1.64496 1.97784 2.05977 2.26422 2.80450 2.98609 3.25750 3.46929 3.53121 3.62213 3.82744 3.97191 3.99359 4.28488 4.34897 4.36931 4.38901 4.40638 4.46742 4.48363 4.60265 4.62989 4.63848 4.69225 4.73609 4.77021 4.84075 4.85648 5.02714 5.09856 5.17397 5.24945 5.55668 5.67514 6.24749 6.34883 6.50226 6.80451 7.08576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.418 6.418 3 C 0.067 3.933 4 C -0.106 4.106 5 H 0.091 0.909 6 C -0.142 4.142 7 C 0.111 3.889 8 H 0.097 0.903 9 N -0.692 5.692 10 C 0.607 3.393 11 O -0.562 6.562 12 C -0.039 4.039 13 N -0.269 5.269 14 N -0.265 5.265 15 C 0.088 3.912 16 C 0.025 3.975 17 C -0.047 4.047 18 O -0.554 6.554 19 Si 0.775 3.225 20 C -0.191 4.191 21 C -0.122 4.122 22 H 0.049 0.951 23 H 0.049 0.951 24 H 0.090 0.910 25 H 0.060 0.940 26 H 0.061 0.939 27 H 0.101 0.899 28 H 0.057 0.943 29 H 0.413 0.587 30 H 0.089 0.911 31 H 0.101 0.899 32 H 0.118 0.882 33 H 0.117 0.883 34 H 0.406 0.594 35 H -0.311 1.311 36 H -0.265 1.265 37 H 0.185 0.815 38 H 0.085 0.915 39 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.973 -2.615 2.092 3.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.338 6.338 3 C -0.009 4.009 4 C -0.125 4.125 5 H 0.109 0.891 6 C -0.180 4.180 7 C 0.006 3.994 8 H 0.115 0.885 9 N -0.342 5.342 10 C 0.393 3.607 11 O -0.439 6.439 12 C -0.197 4.197 13 N -0.107 5.107 14 N -0.054 5.054 15 C -0.051 4.051 16 C -0.100 4.100 17 C -0.157 4.157 18 O -0.365 6.365 19 Si 0.678 3.322 20 C -0.219 4.219 21 C -0.160 4.160 22 H 0.068 0.932 23 H 0.067 0.933 24 H 0.108 0.892 25 H 0.079 0.921 26 H 0.079 0.921 27 H 0.119 0.881 28 H 0.076 0.924 29 H 0.250 0.750 30 H 0.107 0.893 31 H 0.120 0.880 32 H 0.136 0.864 33 H 0.135 0.865 34 H 0.259 0.741 35 H -0.239 1.239 36 H -0.190 1.190 37 H 0.202 0.798 38 H 0.103 0.897 39 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 0.608 -1.981 2.513 3.258 hybrid contribution 0.770 -0.332 0.736 1.116 sum 1.378 -2.314 3.250 4.221 Atomic orbital electron populations 1.22883 0.79870 1.03517 1.00790 1.87857 1.21086 1.29259 1.95597 1.22670 0.92833 0.84287 1.01150 1.22551 0.93257 0.98769 0.97908 0.89076 1.23484 0.97093 1.00071 0.97371 1.21956 0.85137 0.95054 0.97244 0.88536 1.45476 1.10672 1.55423 1.22665 1.16996 0.81487 0.78397 0.83828 1.90777 1.83470 1.48419 1.21252 1.21782 0.96752 1.06836 0.94369 1.73449 1.06595 1.12713 1.17950 1.45679 1.06125 1.37146 1.16430 1.22478 1.03394 0.96479 0.82758 1.21204 0.94655 1.03811 0.90310 1.24441 0.89895 1.09781 0.91593 1.86464 1.32664 1.91298 1.26098 0.93367 0.78159 0.74031 0.86636 1.21649 0.92660 1.04509 1.03062 1.23291 0.95838 0.97039 0.99785 0.93200 0.93263 0.89173 0.92147 0.92093 0.88057 0.92408 0.75005 0.89288 0.88002 0.86368 0.86497 0.74126 1.23912 1.19019 0.79835 0.89661 0.86598 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 113.37 1.25 1.24 16 2 O -0.42 -2.13 10.70 -148.98 -1.59 -3.72 16 3 C 0.07 0.01 5.78 71.98 0.42 0.42 16 4 C -0.11 0.00 3.89 -10.27 -0.04 -0.04 16 5 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 6 C -0.14 -0.30 7.43 31.12 0.23 -0.07 16 7 C 0.11 0.30 4.32 45.51 0.20 0.50 16 8 H 0.10 0.52 7.46 -2.39 -0.02 0.50 16 9 N -0.69 -3.61 5.26 -443.03 -2.33 -5.94 16 10 C 0.61 6.57 7.83 86.75 0.68 7.25 16 11 O -0.56 -9.25 16.52 -3.94 -0.07 -9.31 16 12 C -0.04 -0.37 7.13 42.46 0.30 -0.07 16 13 N -0.27 -2.05 11.67 -48.17 -0.56 -2.61 16 14 N -0.26 -1.10 3.70 -355.94 -1.32 -2.42 16 15 C 0.09 -0.27 10.12 127.77 1.29 1.03 16 16 C 0.03 0.08 6.22 41.40 0.26 0.33 16 17 C -0.05 0.19 2.87 71.24 0.20 0.40 16 18 O -0.55 2.74 10.37 -148.98 -1.55 1.19 16 19 Si 0.77 -2.46 31.22 68.60 2.14 -0.32 16 20 C -0.19 -1.14 9.35 22.41 0.21 -0.93 16 21 C -0.12 0.31 7.39 31.12 0.23 0.54 16 22 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 23 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 24 H 0.09 -0.14 8.14 -2.38 -0.02 -0.16 16 25 H 0.06 -0.12 8.14 -2.38 -0.02 -0.14 16 26 H 0.06 -0.11 7.84 -2.39 -0.02 -0.13 16 27 H 0.10 0.03 7.89 -2.39 -0.02 0.01 16 28 H 0.06 0.33 8.14 -2.38 -0.02 0.31 16 29 H 0.41 1.06 8.43 -92.70 -0.78 0.28 16 30 H 0.09 -0.30 8.14 -2.38 -0.02 -0.32 16 31 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 32 H 0.12 -0.75 6.76 -2.39 -0.02 -0.76 16 33 H 0.12 -1.09 7.96 -2.39 -0.02 -1.11 16 34 H 0.41 -5.33 8.74 -74.05 -0.65 -5.98 16 35 H -0.31 -2.19 7.11 99.48 0.71 -1.49 16 36 H -0.26 0.35 7.11 99.48 0.71 1.06 16 37 H 0.18 0.36 7.01 -2.91 -0.02 0.34 16 38 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 39 H 0.12 -0.65 8.10 -2.39 -0.02 -0.67 16 Total: 0.00 -21.43 330.48 -0.36 -21.79 By element: Atomic # 1 Polarization: -8.95 SS G_CDS: -0.32 Total: -9.27 kcal Atomic # 6 Polarization: 5.39 SS G_CDS: 5.23 Total: 10.61 kcal Atomic # 7 Polarization: -6.77 SS G_CDS: -4.21 Total: -10.97 kcal Atomic # 8 Polarization: -8.63 SS G_CDS: -3.21 Total: -11.84 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.14 Total: -0.32 kcal Total: -21.43 -0.36 -21.79 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16535612_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.058 kcal (2) G-P(sol) polarization free energy of solvation -21.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.788 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.730 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds