Wall clock time and date at job start Thu Mar 4 2021 13:40:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50701 * 109.46937 * 239.99996 * 2 1 3 5 5 C 1.34998 * 126.42720 * 149.69272 * 4 2 1 6 6 N 1.33595 * 108.65575 * 179.83184 * 5 4 2 7 7 C 1.32409 * 109.22011 * 0.43567 * 6 5 4 8 8 C 1.41255 * 132.11733 * 179.73313 * 7 6 5 9 9 Br 1.89099 * 120.25237 * 0.02562 * 8 7 6 10 10 C 1.35703 * 119.48950 * 179.97438 * 8 7 6 11 11 C 1.41758 * 119.53349 * 0.02562 * 10 8 7 12 12 C 1.47581 * 120.00950 * 179.97438 * 11 10 8 13 13 O 1.21592 * 119.99887 * 179.97438 * 12 11 10 14 14 N 1.34773 * 120.00007 * 0.02562 * 12 11 10 15 15 C 1.46494 * 119.99947 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.85637 * 336.19672 * 15 14 12 17 17 C 1.53789 * 113.61389 * 107.50379 * 15 14 12 18 18 C 1.53784 * 87.08284 * 139.97898 * 17 15 14 19 19 H 1.09001 * 113.61360 * 89.10940 * 18 17 15 20 20 C 1.52999 * 113.69169 * 220.00963 * 18 17 15 21 21 O 1.42898 * 109.46689 * 272.53664 * 20 18 17 22 22 C 1.35903 * 116.99777 * 180.02562 * 21 20 18 23 23 C 1.38732 * 120.05781 * 359.72029 * 22 21 20 24 24 C 1.38140 * 119.94685 * 179.74812 * 23 22 21 25 25 C 1.38269 * 120.05389 * 0.50686 * 24 23 22 26 26 C 1.38262 * 120.11020 * 359.76857 * 25 24 23 27 27 C 1.38147 * 120.05758 * 359.97438 * 26 25 24 28 28 C 1.53786 * 113.61522 * 204.99929 * 15 14 12 29 29 C 1.36501 * 119.98508 * 0.02562 * 11 10 8 30 30 N 1.35951 * 120.49942 * 359.97438 * 29 11 10 31 31 H 0.96702 * 113.99404 * 300.00134 * 1 2 3 32 32 H 1.09001 * 109.47103 * 120.00361 * 2 1 3 33 33 H 1.48504 * 110.00019 * 178.68243 * 3 2 1 34 34 H 1.48503 * 109.99816 * 299.99729 * 3 2 1 35 35 H 1.08002 * 125.67518 * 359.97438 * 5 4 2 36 36 H 1.07997 * 120.23208 * 180.02562 * 10 8 7 37 37 H 0.97004 * 119.99981 * 0.02562 * 14 12 11 38 38 H 1.08998 * 113.61094 * 254.52765 * 17 15 14 39 39 H 1.08993 * 113.61200 * 25.43023 * 17 15 14 40 40 H 1.08996 * 109.46845 * 32.53445 * 20 18 17 41 41 H 1.08997 * 109.47015 * 152.53540 * 20 18 17 42 42 H 1.08002 * 120.02277 * 0.02562 * 23 22 21 43 43 H 1.07992 * 119.97391 * 180.27933 * 24 23 22 44 44 H 1.08006 * 119.94448 * 179.74520 * 25 24 23 45 45 H 1.08000 * 119.97252 * 179.97438 * 26 25 24 46 46 H 1.08000 * 120.02323 * 179.97438 * 27 26 25 47 47 H 1.09002 * 113.61271 * 334.56876 * 28 15 14 48 48 H 1.08993 * 113.61589 * 105.38692 * 28 15 14 49 49 H 1.07998 * 119.75172 * 179.97438 * 29 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0827 -0.4573 -1.8884 6 7 3.1766 -1.2964 -2.9237 7 6 2.1069 -2.0764 -2.9511 8 6 1.7124 -3.1129 -3.8259 9 35 2.8132 -3.5990 -5.2846 10 6 0.5380 -3.7578 -3.6108 11 6 -0.2750 -3.3813 -2.5122 12 6 -1.5545 -4.0752 -2.2688 13 8 -2.2515 -3.7524 -1.3262 14 7 -1.9500 -5.0674 -3.0907 15 6 -3.2199 -5.7566 -2.8487 16 1 -3.5442 -5.6943 -1.8100 17 6 -4.3192 -5.3961 -3.8619 18 6 -4.7161 -6.8817 -3.8411 19 1 -5.4506 -7.1267 -3.0739 20 6 -5.0858 -7.4386 -5.2173 21 8 -6.4749 -7.2125 -5.4650 22 6 -6.9690 -7.6506 -6.6528 23 6 -6.1329 -8.2798 -7.5637 24 6 -6.6387 -8.7288 -8.7682 25 6 -7.9749 -8.5423 -9.0707 26 6 -8.8091 -7.9105 -8.1671 27 6 -8.3092 -7.4643 -6.9589 28 6 -3.2666 -7.1820 -3.4241 29 6 0.1254 -2.3760 -1.6802 30 7 1.3020 -1.7296 -1.8953 31 1 -0.3932 0.4417 0.7651 32 1 1.7924 -0.5139 0.8900 33 1 3.5347 1.7702 0.0321 34 1 1.5616 2.4678 -1.2086 35 1 3.8084 0.2964 -1.6208 36 1 0.2249 -4.5524 -4.2718 37 1 -1.3934 -5.3257 -3.8420 38 1 -5.0850 -4.7339 -3.4579 39 1 -3.9330 -5.0608 -4.8243 40 1 -4.4939 -6.9372 -5.9830 41 1 -4.8816 -8.5089 -5.2430 42 1 -5.0883 -8.4224 -7.3293 43 1 -5.9891 -9.2226 -9.4756 44 1 -8.3676 -8.8904 -10.0147 45 1 -9.8523 -7.7656 -8.4059 46 1 -8.9612 -6.9705 -6.2537 47 1 -2.5926 -7.3349 -4.2670 48 1 -3.1812 -7.9614 -2.6671 49 1 -0.4971 -2.0919 -0.8446 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16536076_12335884.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:40:52 Heat of formation + Delta-G solvation = 56.058732 kcal Electronic energy + Delta-G solvation = -35071.463603 eV Core-core repulsion = 30207.455582 eV Total energy + Delta-G solvation = -4864.008020 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 458.067 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -44.37820 -41.60615 -41.01944 -39.78162 -38.49229 -38.07681 -37.89335 -35.59051 -34.79934 -32.66183 -32.05002 -31.95282 -31.01424 -30.34503 -29.10175 -26.93947 -26.73330 -26.06481 -24.21136 -24.16991 -23.36572 -22.71247 -22.43896 -21.79976 -20.75318 -19.30595 -19.15811 -18.73628 -18.58170 -18.00371 -17.64740 -17.47281 -16.96645 -16.91725 -16.66980 -16.33219 -16.20841 -16.02075 -15.86735 -15.57276 -15.52866 -15.32796 -15.16355 -14.66978 -14.39111 -14.29270 -14.21565 -14.09310 -13.47136 -13.44991 -13.37688 -13.30684 -13.11771 -12.98285 -12.83700 -12.57054 -12.39089 -12.11097 -12.04838 -11.83167 -11.70344 -11.65016 -11.53787 -11.42888 -11.34071 -11.22326 -10.78296 -10.27408 -10.06933 -9.96654 -9.17481 -9.16279 -5.01639 -0.97975 -0.46630 0.10950 0.37895 0.48242 0.87924 1.06576 1.37712 1.62064 1.66537 1.89848 2.00444 2.14905 2.23575 2.66796 2.83698 2.95723 3.12324 3.29845 3.34821 3.40259 3.48712 3.51703 3.75239 3.78353 3.81520 3.90271 3.96422 3.98468 4.22243 4.24430 4.26948 4.28407 4.30606 4.35836 4.39561 4.43615 4.49597 4.55318 4.69478 4.72176 4.75246 4.81733 4.87537 4.97287 5.04786 5.07371 5.07939 5.16131 5.34207 5.45392 5.47288 5.49867 5.60451 5.85553 6.28569 6.30551 6.47016 6.72574 6.94098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.052 4.052 3 Si 0.821 3.179 4 C -0.045 4.045 5 C 0.016 3.984 6 N -0.494 5.494 7 C 0.224 3.776 8 C -0.085 4.085 9 Br 0.008 6.992 10 C -0.018 4.018 11 C -0.174 4.174 12 C 0.581 3.419 13 O -0.563 6.563 14 N -0.695 5.695 15 C 0.120 3.880 16 H 0.106 0.894 17 C -0.146 4.146 18 C -0.104 4.104 19 H 0.100 0.900 20 C 0.067 3.933 21 O -0.332 6.332 22 C 0.113 3.887 23 C -0.217 4.217 24 C -0.089 4.089 25 C -0.170 4.170 26 C -0.088 4.088 27 C -0.175 4.175 28 C -0.119 4.119 29 C 0.169 3.831 30 N -0.358 5.358 31 H 0.415 0.585 32 H 0.110 0.890 33 H -0.271 1.271 34 H -0.310 1.310 35 H 0.201 0.799 36 H 0.191 0.809 37 H 0.417 0.583 38 H 0.061 0.939 39 H 0.095 0.905 40 H 0.075 0.925 41 H 0.076 0.924 42 H 0.145 0.855 43 H 0.144 0.856 44 H 0.140 0.860 45 H 0.145 0.855 46 H 0.130 0.870 47 H 0.114 0.886 48 H 0.093 0.907 49 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.102 -2.250 2.209 3.340 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.382 6.382 2 C -0.160 4.160 3 Si 0.724 3.276 4 C -0.156 4.156 5 C -0.133 4.133 6 N -0.213 5.213 7 C -0.021 4.021 8 C -0.167 4.167 9 Br 0.094 6.906 10 C -0.044 4.044 11 C -0.181 4.181 12 C 0.367 3.633 13 O -0.443 6.443 14 N -0.346 5.346 15 C 0.016 3.984 16 H 0.124 0.876 17 C -0.185 4.185 18 C -0.123 4.123 19 H 0.118 0.882 20 C -0.008 4.008 21 O -0.246 6.246 22 C 0.068 3.932 23 C -0.236 4.236 24 C -0.107 4.107 25 C -0.188 4.188 26 C -0.106 4.106 27 C -0.194 4.194 28 C -0.157 4.157 29 C 0.043 3.957 30 N -0.031 5.031 31 H 0.269 0.731 32 H 0.128 0.872 33 H -0.197 1.197 34 H -0.238 1.238 35 H 0.218 0.782 36 H 0.208 0.792 37 H 0.255 0.745 38 H 0.080 0.920 39 H 0.114 0.886 40 H 0.094 0.906 41 H 0.094 0.906 42 H 0.162 0.838 43 H 0.162 0.838 44 H 0.158 0.842 45 H 0.163 0.837 46 H 0.148 0.852 47 H 0.132 0.868 48 H 0.111 0.889 49 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges -0.018 -1.807 1.044 2.087 hybrid contribution -0.402 -0.310 0.158 0.532 sum -0.420 -2.117 1.203 2.471 Atomic orbital electron populations 1.86329 1.16794 1.82729 1.52356 1.24724 0.86284 1.11414 0.93596 0.94106 0.77936 0.71286 0.84313 1.21683 0.96815 0.95247 1.01833 1.22670 0.97351 1.00681 0.92567 1.70783 1.20531 1.08062 1.21962 1.20788 0.89795 1.00024 0.91531 1.20575 0.98797 0.99312 0.98030 1.96828 1.66733 1.90391 1.36696 1.21410 0.89813 0.97807 0.95340 1.19339 0.98546 1.01090 0.99163 1.17521 0.83704 0.79919 0.82124 1.90837 1.55993 1.65977 1.31514 1.45702 1.23150 1.34979 1.30782 1.22570 0.82599 0.92960 1.00313 0.87601 1.23583 0.98097 0.96525 1.00284 1.22304 0.97856 0.96125 0.96048 0.88169 1.22994 0.78987 1.01450 0.97325 1.86057 1.28037 1.76655 1.33859 1.19239 0.93579 0.94857 0.85565 1.21510 1.00902 1.05064 0.96075 1.21321 0.95955 0.97280 0.96101 1.21425 0.94245 1.02078 1.01031 1.21286 1.00929 0.95922 0.92438 1.20707 0.93386 1.05911 0.99361 1.23332 0.94715 0.95423 1.02188 1.22305 0.84605 0.89608 0.99210 1.42731 1.15202 1.24174 1.20968 0.73122 0.87201 1.19678 1.23772 0.78220 0.79207 0.74461 0.91996 0.88620 0.90646 0.90583 0.83781 0.83823 0.84204 0.83720 0.85216 0.86775 0.88880 0.78805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 1.78 10.88 -148.98 -1.62 0.16 16 2 C -0.05 0.14 3.05 71.24 0.22 0.36 16 3 Si 0.82 -4.05 31.27 68.60 2.15 -1.91 16 4 C -0.04 -0.26 6.28 41.01 0.26 0.00 16 5 C 0.02 0.13 10.44 83.68 0.87 1.00 16 6 N -0.49 -6.16 11.30 -194.10 -2.19 -8.35 16 7 C 0.22 2.19 7.59 134.19 1.02 3.21 16 8 C -0.08 -0.39 6.24 22.42 0.14 -0.25 16 9 Br 0.01 0.03 33.72 -20.37 -0.69 -0.66 16 10 C -0.02 0.02 9.26 22.55 0.21 0.23 16 11 C -0.17 -0.26 5.84 -20.35 -0.12 -0.37 16 12 C 0.58 1.07 7.76 86.71 0.67 1.75 16 13 O -0.56 -5.26 15.87 -4.00 -0.06 -5.33 16 14 N -0.69 3.46 5.31 -443.15 -2.35 1.11 16 15 C 0.12 -0.53 4.24 45.52 0.19 -0.34 16 16 H 0.11 -0.04 7.46 -2.39 -0.02 -0.06 16 17 C -0.15 0.53 7.43 31.12 0.23 0.76 16 18 C -0.10 0.55 4.01 -10.26 -0.04 0.51 16 19 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 20 C 0.07 -0.26 4.58 71.98 0.33 0.07 16 21 O -0.33 -1.23 10.14 -92.46 -0.94 -2.17 16 22 C 0.11 0.49 6.69 22.51 0.15 0.64 16 23 C -0.22 -0.25 9.04 22.36 0.20 -0.05 16 24 C -0.09 -0.03 10.04 22.25 0.22 0.20 16 25 C -0.17 -0.13 10.04 22.28 0.22 0.09 16 26 C -0.09 -0.16 10.04 22.25 0.22 0.06 16 27 C -0.18 -0.77 9.99 22.37 0.22 -0.54 16 28 C -0.12 1.11 7.39 31.12 0.23 1.34 16 29 C 0.17 0.80 9.91 83.65 0.83 1.63 16 30 N -0.36 -2.70 2.93 -337.71 -0.99 -3.69 16 31 H 0.42 -5.77 8.74 -74.06 -0.65 -6.42 16 32 H 0.11 -0.83 7.96 -2.39 -0.02 -0.85 16 33 H -0.27 0.40 6.91 99.48 0.69 1.09 16 34 H -0.31 -1.57 7.11 99.48 0.71 -0.86 16 35 H 0.20 0.64 6.76 -2.91 -0.02 0.62 16 36 H 0.19 -1.88 6.44 -2.91 -0.02 -1.89 16 37 H 0.42 -4.71 6.76 -92.71 -0.63 -5.34 16 38 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 39 H 0.10 -0.48 7.90 -2.39 -0.02 -0.50 16 40 H 0.08 -0.47 7.36 -2.39 -0.02 -0.48 16 41 H 0.08 -0.45 7.67 -2.39 -0.02 -0.47 16 42 H 0.14 -0.52 6.30 -2.91 -0.02 -0.54 16 43 H 0.14 -0.61 8.06 -2.91 -0.02 -0.64 16 44 H 0.14 -0.44 8.06 -2.91 -0.02 -0.47 16 45 H 0.15 -0.36 8.06 -2.91 -0.02 -0.38 16 46 H 0.13 0.41 8.06 -2.91 -0.02 0.38 16 47 H 0.11 -1.55 8.08 -2.39 -0.02 -1.57 16 48 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 49 H 0.20 0.83 6.19 -2.91 -0.02 0.81 16 Total: 0.00 -28.77 429.57 -0.63 -29.40 By element: Atomic # 1 Polarization: -18.65 SS G_CDS: -0.22 Total: -18.87 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: 6.29 Total: 10.30 kcal Atomic # 7 Polarization: -5.39 SS G_CDS: -5.54 Total: -10.93 kcal Atomic # 8 Polarization: -4.72 SS G_CDS: -2.62 Total: -7.34 kcal Atomic # 14 Polarization: -4.05 SS G_CDS: 2.15 Total: -1.91 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.69 Total: -0.66 kcal Total: -28.77 -0.63 -29.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16536076_12335884.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.462 kcal (2) G-P(sol) polarization free energy of solvation -28.775 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.403 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds