Wall clock time and date at job start Thu Mar 4 2021 12:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86297 * 1 3 3 C 1.86296 * 110.06347 * 2 1 4 4 C 1.87525 * 109.99946 * 238.63969 * 2 1 3 5 5 C 1.53929 * 106.84919 * 196.90079 * 4 2 1 6 6 C 1.52628 * 109.31140 * 57.20521 * 5 4 2 7 7 N 1.46363 * 111.88956 * 283.47884 * 6 5 4 8 8 N 1.36594 * 110.99994 * 203.19927 * 7 6 5 9 9 C 1.34776 * 120.00451 * 111.11936 * 8 7 6 10 10 O 1.21587 * 119.99760 * 354.97091 * 9 8 7 11 11 C 1.47574 * 119.99925 * 174.97672 * 9 8 7 12 12 C 1.36502 * 120.00570 * 179.97438 * 11 9 8 13 13 N 1.35953 * 120.50101 * 179.97438 * 12 11 9 14 14 C 1.36995 * 132.40984 * 180.02562 * 13 12 11 15 15 C 1.50707 * 126.42927 * 0.05261 * 14 13 12 16 16 O 1.42895 * 109.46863 * 329.70689 * 15 14 13 17 17 Si 1.86301 * 109.47174 * 209.70728 * 15 14 13 18 18 H 1.48503 * 109.46898 * 59.99679 * 17 15 14 19 19 H 1.48500 * 109.46888 * 299.99987 * 17 15 14 20 20 H 1.48497 * 109.46995 * 179.97438 * 17 15 14 21 21 C 1.35002 * 107.14278 * 179.78390 * 14 13 12 22 22 N 1.33583 * 108.65579 * 0.23217 * 21 14 13 23 23 C 1.32415 * 109.22401 * 359.97438 * 22 21 14 24 24 C 1.41247 * 132.11917 * 179.97438 * 23 22 21 25 25 Br 1.89104 * 120.25535 * 0.02562 * 24 23 22 26 26 C 1.35712 * 119.48752 * 179.32956 * 24 23 22 27 27 C 1.47722 * 111.30450 * 79.01841 * 7 6 5 28 28 H 1.09004 * 109.46694 * 298.63583 * 1 2 3 29 29 H 1.09004 * 109.47508 * 58.62957 * 1 2 3 30 30 H 1.08995 * 109.47412 * 178.63721 * 1 2 3 31 31 H 1.09002 * 109.47131 * 181.36551 * 3 2 1 32 32 H 1.09000 * 109.47209 * 301.36703 * 3 2 1 33 33 H 1.09001 * 109.47083 * 61.36822 * 3 2 1 34 34 H 1.09003 * 109.97882 * 316.23616 * 4 2 1 35 35 H 1.08998 * 109.98162 * 77.47604 * 4 2 1 36 36 H 1.09000 * 109.50037 * 177.15661 * 5 4 2 37 37 H 1.08999 * 109.50065 * 297.21810 * 5 4 2 38 38 H 1.09000 * 108.99603 * 162.85807 * 6 5 4 39 39 H 1.08997 * 109.00018 * 44.09708 * 6 5 4 40 40 H 0.97000 * 119.99792 * 291.11855 * 8 7 6 41 41 H 1.07995 * 119.74714 * 359.97438 * 12 11 9 42 42 H 1.09006 * 109.46875 * 89.70970 * 15 14 13 43 43 H 0.96706 * 113.99982 * 179.97438 * 16 15 14 44 44 H 1.08002 * 125.67161 * 180.23253 * 21 14 13 45 45 H 1.08004 * 120.23059 * 180.21769 * 26 24 23 46 46 H 1.08994 * 109.94400 * 59.06447 * 27 7 6 47 47 H 1.09003 * 109.94590 * 180.23247 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5021 1.7499 0.0000 4 6 2.5043 -0.9171 -1.5047 5 6 3.9815 -1.2501 -1.2282 6 6 4.0830 -2.0637 0.0591 7 7 3.9262 -1.2251 1.2484 8 7 4.5043 -1.8096 2.3393 9 6 5.6121 -1.2700 2.8853 10 8 6.1494 -0.3174 2.3541 11 6 6.1728 -1.8353 4.1277 12 6 7.2951 -1.2892 4.6805 13 7 7.8199 -1.8017 5.8252 14 6 8.9115 -1.4554 6.5771 15 6 9.8724 -0.3294 6.2941 16 8 9.9580 -0.1196 4.8833 17 14 11.5562 -0.7678 6.9600 18 1 12.0404 -2.0087 6.3035 19 1 11.4672 -0.9859 8.4262 20 1 12.5031 0.3414 6.6806 21 6 8.9614 -2.3082 7.6224 22 7 7.9392 -3.1628 7.5259 23 6 7.2335 -2.8778 6.4423 24 6 6.0745 -3.4626 5.8856 25 35 5.2542 -4.9423 6.7304 26 6 5.5461 -2.9456 4.7476 27 6 2.5043 -0.9170 1.5042 28 1 -0.3633 0.4925 0.9020 29 1 -0.3634 0.5350 -0.8774 30 1 -0.3634 -1.0273 -0.0244 31 1 3.5918 1.7387 -0.0245 32 1 2.1243 2.2747 -0.8775 33 1 2.1642 2.2601 0.9020 34 1 1.9365 -1.8359 -1.6509 35 1 2.4230 -0.2848 -2.3889 36 1 4.3852 -1.8302 -2.0580 37 1 4.5489 -0.3257 -1.1206 38 1 5.0572 -2.5513 0.0948 39 1 3.3054 -2.8274 0.0585 40 1 4.1176 -2.6132 2.7209 41 1 7.7696 -0.4436 4.2050 42 1 9.5169 0.5814 6.7761 43 1 10.5600 0.5927 4.6273 44 1 9.7042 -2.3008 8.4064 45 1 4.6582 -3.3811 4.3135 46 1 1.9430 -1.8408 1.6438 47 1 2.4134 -0.2893 2.3906 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16608516_12335884.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:35:25 Heat of formation + Delta-G solvation = 34.852158 kcal Electronic energy + Delta-G solvation = -30716.945342 eV Core-core repulsion = 26493.509476 eV Total energy + Delta-G solvation = -4223.435866 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 426.064 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -44.27325 -41.32239 -39.08396 -38.18480 -37.84082 -35.48083 -34.91311 -32.93226 -32.02465 -31.20310 -30.25509 -29.29119 -28.31556 -27.52373 -26.89002 -26.08206 -24.22109 -24.10452 -22.51558 -21.93704 -21.77058 -19.31217 -19.06511 -18.68038 -18.08410 -17.72456 -17.45555 -16.75123 -16.54461 -16.22457 -15.76703 -15.65541 -15.45727 -15.20880 -14.96010 -14.74372 -14.59645 -14.53771 -14.32980 -13.94565 -13.76309 -13.47695 -13.38565 -13.36865 -13.16138 -13.09579 -13.03777 -12.93049 -12.81095 -12.09151 -12.01610 -12.00540 -11.94608 -11.63471 -11.53955 -11.37732 -11.36512 -10.87403 -10.77784 -10.73621 -10.45455 -10.22109 -10.04011 -9.66607 -9.06548 -0.90065 -0.39669 0.16068 0.86907 1.13051 1.27681 1.45916 1.55002 1.57658 1.75480 1.85439 1.94362 1.97486 2.15101 2.24664 2.64384 2.75965 2.97570 3.13133 3.31320 3.39733 3.50587 3.55026 3.91883 4.03693 4.07276 4.18577 4.30225 4.32016 4.43527 4.46773 4.49648 4.56855 4.71341 4.76676 4.84135 4.85088 4.88197 4.89171 4.95750 4.96509 5.13032 5.23225 5.33777 5.50899 5.55191 5.61680 5.70185 5.80430 6.11293 6.23159 6.43220 6.66052 7.35992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.456 4.456 2 Si 1.098 2.902 3 C -0.465 4.465 4 C -0.416 4.416 5 C -0.103 4.103 6 C 0.024 3.976 7 N -0.296 5.296 8 N -0.568 5.568 9 C 0.595 3.405 10 O -0.543 6.543 11 C -0.171 4.171 12 C 0.173 3.827 13 N -0.357 5.357 14 C -0.043 4.043 15 C -0.054 4.054 16 O -0.570 6.570 17 Si 1.005 2.995 18 H -0.282 1.282 19 H -0.239 1.239 20 H -0.239 1.239 21 C 0.025 3.975 22 N -0.492 5.492 23 C 0.223 3.777 24 C -0.081 4.081 25 Br 0.006 6.994 26 C -0.023 4.023 27 C -0.272 4.272 28 H 0.070 0.930 29 H 0.075 0.925 30 H 0.076 0.924 31 H 0.059 0.941 32 H 0.070 0.930 33 H 0.063 0.937 34 H 0.086 0.914 35 H 0.083 0.917 36 H 0.076 0.924 37 H 0.064 0.936 38 H 0.071 0.929 39 H 0.064 0.936 40 H 0.393 0.607 41 H 0.195 0.805 42 H 0.110 0.890 43 H 0.410 0.590 44 H 0.213 0.787 45 H 0.183 0.817 46 H 0.075 0.925 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.240 1.607 -2.136 3.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.565 4.565 2 Si 1.287 2.713 3 C -0.571 4.571 4 C -0.502 4.502 5 C -0.141 4.141 6 C -0.104 4.104 7 N -0.113 5.113 8 N -0.312 5.312 9 C 0.381 3.619 10 O -0.419 6.419 11 C -0.180 4.180 12 C 0.047 3.953 13 N -0.030 5.030 14 C -0.154 4.154 15 C -0.163 4.163 16 O -0.381 6.381 17 Si 0.825 3.175 18 H -0.207 1.207 19 H -0.162 1.162 20 H -0.162 1.162 21 C -0.125 4.125 22 N -0.211 5.211 23 C -0.023 4.023 24 C -0.164 4.164 25 Br 0.091 6.909 26 C -0.049 4.049 27 C -0.444 4.444 28 H 0.089 0.911 29 H 0.094 0.906 30 H 0.095 0.905 31 H 0.078 0.922 32 H 0.089 0.911 33 H 0.082 0.918 34 H 0.104 0.896 35 H 0.102 0.898 36 H 0.095 0.905 37 H 0.083 0.917 38 H 0.089 0.911 39 H 0.082 0.918 40 H 0.235 0.765 41 H 0.212 0.788 42 H 0.128 0.872 43 H 0.263 0.737 44 H 0.229 0.771 45 H 0.200 0.800 46 H 0.093 0.907 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -1.594 0.868 -1.294 2.229 hybrid contribution -0.161 0.274 -0.435 0.539 sum -1.755 1.142 -1.729 2.715 Atomic orbital electron populations 1.26181 1.20283 1.05095 1.04911 0.78204 0.64943 0.64867 0.63337 1.26332 1.06197 1.20464 1.04085 1.26476 0.99919 1.08847 1.14967 1.21190 0.97344 1.00520 0.95068 1.22624 1.02425 0.95474 0.89835 1.62992 1.15216 1.38983 0.94059 1.45247 1.28010 1.29322 1.28643 1.17328 0.79716 0.82445 0.82397 1.90807 1.60022 1.28347 1.62770 1.19170 0.98703 1.00856 0.99227 1.22208 0.92281 0.97039 0.83787 1.42685 1.19812 1.22760 1.17730 1.21485 0.92548 1.04879 0.96516 1.24620 1.06972 0.97107 0.87621 1.86348 1.70740 1.61022 1.19952 0.84951 0.72283 0.80239 0.80046 1.20700 1.16245 1.16187 1.22866 0.98632 0.91806 0.99150 1.70805 1.07407 1.26642 1.16213 1.20687 0.97726 0.90639 0.93198 1.20534 0.96353 1.00138 0.99338 1.96821 1.77502 1.36294 1.80257 1.21330 0.99211 0.92677 0.91688 1.28306 0.89460 1.08308 1.18279 0.91067 0.90605 0.90464 0.92187 0.91068 0.91788 0.89554 0.89846 0.90516 0.91708 0.91088 0.91793 0.76506 0.78847 0.87227 0.73738 0.77077 0.80030 0.90691 0.89326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 2.89 8.65 113.37 0.98 3.87 16 2 Si 1.10 -6.99 11.99 68.60 0.82 -6.17 16 3 C -0.46 0.40 8.65 113.37 0.98 1.38 16 4 C -0.42 2.23 5.04 72.30 0.36 2.60 16 5 C -0.10 0.22 5.74 30.78 0.18 0.39 16 6 C 0.02 -0.05 5.38 86.28 0.46 0.42 16 7 N -0.30 -0.09 4.15 -334.13 -1.39 -1.48 16 8 N -0.57 0.18 4.65 -175.79 -0.82 -0.64 16 9 C 0.59 2.88 7.86 86.71 0.68 3.57 16 10 O -0.54 -6.78 16.60 -3.99 -0.07 -6.84 16 11 C -0.17 -0.48 5.84 -20.35 -0.12 -0.60 16 12 C 0.17 0.87 9.91 83.65 0.83 1.70 16 13 N -0.36 -2.41 2.93 -337.71 -0.99 -3.41 16 14 C -0.04 -0.18 6.27 41.01 0.26 0.08 16 15 C -0.05 0.17 3.05 71.24 0.22 0.39 16 16 O -0.57 1.42 10.89 -148.98 -1.62 -0.20 16 17 Si 1.01 -4.41 26.61 68.60 1.83 -2.58 16 18 H -0.28 -0.52 7.11 99.48 0.71 0.19 16 19 H -0.24 1.21 6.84 99.48 0.68 1.89 16 20 H -0.24 1.35 7.11 99.48 0.71 2.06 16 21 C 0.02 0.13 10.44 83.68 0.87 1.00 16 22 N -0.49 -5.24 11.30 -194.11 -2.19 -7.43 16 23 C 0.22 1.99 7.59 134.18 1.02 3.01 16 24 C -0.08 -0.40 6.24 22.42 0.14 -0.26 16 25 Br 0.01 0.02 33.72 -20.37 -0.69 -0.66 16 26 C -0.02 0.00 9.26 22.55 0.21 0.21 16 27 C -0.27 1.12 4.85 127.53 0.62 1.74 16 28 H 0.07 -0.42 7.96 -2.38 -0.02 -0.44 16 29 H 0.07 -0.45 7.96 -2.38 -0.02 -0.47 16 30 H 0.08 -0.56 7.96 -2.39 -0.02 -0.58 16 31 H 0.06 0.18 7.96 -2.39 -0.02 0.16 16 32 H 0.07 -0.13 7.96 -2.39 -0.02 -0.15 16 33 H 0.06 -0.02 7.96 -2.39 -0.02 -0.04 16 34 H 0.09 -0.62 7.99 -2.39 -0.02 -0.64 16 35 H 0.08 -0.45 7.99 -2.39 -0.02 -0.47 16 36 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 37 H 0.06 0.07 7.96 -2.39 -0.02 0.05 16 38 H 0.07 -0.01 8.03 -2.39 -0.02 -0.02 16 39 H 0.06 -0.37 7.78 -2.39 -0.02 -0.39 16 40 H 0.39 -2.49 6.88 -215.50 -1.48 -3.97 16 41 H 0.19 0.91 6.20 -2.91 -0.02 0.90 16 42 H 0.11 -0.86 7.96 -2.38 -0.02 -0.88 16 43 H 0.41 -4.84 8.74 -74.05 -0.65 -5.49 16 44 H 0.21 -0.24 6.72 -2.91 -0.02 -0.26 16 45 H 0.18 -1.33 6.46 -2.91 -0.02 -1.35 16 46 H 0.07 -0.58 7.92 -2.39 -0.02 -0.60 16 47 H 0.09 -0.26 7.99 -2.39 -0.02 -0.28 16 Total: 0.00 -23.14 403.22 2.20 -20.94 By element: Atomic # 1 Polarization: -10.64 SS G_CDS: -0.38 Total: -11.02 kcal Atomic # 6 Polarization: 11.80 SS G_CDS: 7.69 Total: 19.49 kcal Atomic # 7 Polarization: -7.56 SS G_CDS: -5.39 Total: -12.95 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -1.69 Total: -7.05 kcal Atomic # 14 Polarization: -11.40 SS G_CDS: 2.65 Total: -8.75 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.66 kcal Total: -23.14 2.20 -20.94 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16608516_12335884.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.791 kcal (2) G-P(sol) polarization free energy of solvation -23.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.938 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds