Wall clock time and date at job start Thu Mar 4 2021 12:35:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86303 * 109.47016 * 2 1 4 4 C 1.86292 * 109.47227 * 239.99614 * 2 1 3 5 5 C 1.86309 * 109.47093 * 119.99495 * 2 1 3 6 6 N 1.46496 * 109.46907 * 60.00301 * 5 2 1 7 7 C 1.35828 * 126.05608 * 89.99804 * 6 5 2 8 8 C 1.35763 * 107.56414 * 180.02562 * 7 6 5 9 9 N 1.40720 * 126.08741 * 179.97438 * 8 7 6 10 10 C 1.34776 * 120.00467 * 179.97438 * 9 8 7 11 11 O 1.21618 * 119.99873 * 0.02562 * 10 9 8 12 12 C 1.47557 * 120.00338 * 179.97438 * 10 9 8 13 13 C 1.36497 * 120.01558 * 179.97438 * 12 10 9 14 14 N 1.35952 * 120.50841 * 179.97438 * 13 12 10 15 15 C 1.36996 * 132.41458 * 180.02562 * 14 13 12 16 16 C 1.50701 * 126.42569 * 0.04005 * 15 14 13 17 17 O 1.42896 * 109.47417 * 329.71212 * 16 15 14 18 18 Si 1.86301 * 109.47149 * 209.71195 * 16 15 14 19 19 H 1.48506 * 109.47302 * 59.99966 * 18 16 15 20 20 H 1.48503 * 109.47334 * 300.00099 * 18 16 15 21 21 H 1.48500 * 109.47376 * 180.02562 * 18 16 15 22 22 C 1.35013 * 107.14555 * 179.77713 * 15 14 13 23 23 N 1.33578 * 108.65069 * 0.23312 * 22 15 14 24 24 C 1.32414 * 109.22611 * 359.97438 * 23 22 15 25 25 C 1.41248 * 132.12041 * 180.02562 * 24 23 22 26 26 Br 1.89107 * 120.25164 * 359.94974 * 25 24 23 27 27 C 1.35711 * 119.49642 * 179.35372 * 25 24 23 28 28 C 1.40272 * 107.83621 * 0.24444 * 8 7 6 29 29 N 1.30836 * 108.33375 * 359.58699 * 28 8 7 30 30 H 1.09003 * 109.47496 * 300.00139 * 1 2 3 31 31 H 1.08996 * 109.47083 * 60.00563 * 1 2 3 32 32 H 1.09006 * 109.47133 * 180.02562 * 1 2 3 33 33 H 1.09000 * 109.46669 * 180.02562 * 3 2 1 34 34 H 1.08996 * 109.46735 * 299.99651 * 3 2 1 35 35 H 1.08991 * 109.47442 * 59.99771 * 3 2 1 36 36 H 1.08998 * 109.47299 * 299.99980 * 4 2 1 37 37 H 1.09001 * 109.47306 * 60.00379 * 4 2 1 38 38 H 1.09006 * 109.47520 * 179.97438 * 4 2 1 39 39 H 1.09000 * 109.47007 * 300.00054 * 5 2 1 40 40 H 1.09002 * 109.46854 * 180.02562 * 5 2 1 41 41 H 1.07999 * 126.21987 * 0.03484 * 7 6 5 42 42 H 0.97001 * 119.99480 * 0.02562 * 9 8 7 43 43 H 1.08001 * 119.74764 * 0.02562 * 13 12 10 44 44 H 1.09002 * 109.46793 * 89.71665 * 16 15 14 45 45 H 0.96708 * 114.00095 * 299.99924 * 17 16 15 46 46 H 1.08001 * 125.67120 * 180.25864 * 22 15 14 47 47 H 1.07997 * 120.23701 * 180.17671 * 27 25 24 48 48 H 1.07997 * 125.83337 * 179.72354 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8783 -1.5210 5 6 2.4840 -0.8781 1.5213 6 7 1.9957 -2.2593 1.5213 7 6 2.6259 -3.3300 0.9723 8 6 1.8448 -4.4196 1.1871 9 7 2.1282 -5.7361 0.7788 10 6 1.2620 -6.7298 1.0591 11 8 0.2352 -6.4887 1.6645 12 6 1.5589 -8.1102 0.6303 13 6 0.6821 -9.1169 0.9145 14 7 0.9453 -10.3922 0.5239 15 6 0.2545 -11.5658 0.6736 16 6 -1.0738 -11.7404 1.3637 17 8 -1.2007 -10.7703 2.4052 18 14 -1.1742 -13.4516 2.0935 19 1 -0.0772 -13.6354 3.0775 20 1 -1.0423 -14.4599 1.0112 21 1 -2.4833 -13.6240 2.7730 22 6 0.9841 -12.5354 0.0818 23 7 2.0963 -11.9890 -0.4169 24 6 2.0973 -10.6901 -0.1594 25 6 3.0214 -9.6653 -0.4608 26 35 4.6100 -10.0628 -1.4066 27 6 2.7548 -8.3911 -0.0772 28 6 0.7021 -3.9985 1.8832 29 7 0.7960 -2.7096 2.0870 30 1 -0.3634 0.5139 0.8900 31 1 -0.3633 0.5137 -0.8900 32 1 -0.3634 -1.0277 0.0005 33 1 3.5740 1.7564 -0.0005 34 1 2.1207 2.2702 -0.8900 35 1 2.1206 2.2703 0.8899 36 1 2.1207 -1.9059 -1.5210 37 1 2.1207 -0.3645 -2.4111 38 1 3.5741 -0.8779 -1.5213 39 1 2.1207 -0.3642 2.4112 40 1 3.5740 -0.8777 1.5215 41 1 3.5757 -3.3171 0.4584 42 1 2.9474 -5.9284 0.2962 43 1 -0.2282 -8.8986 1.4531 44 1 -1.8789 -11.6057 0.6414 45 1 -0.5157 -10.8312 3.0851 46 1 0.7133 -13.5792 0.0213 47 1 3.4516 -7.5978 -0.3040 48 1 -0.1146 -4.6307 2.1990 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16608520_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:35:48 Heat of formation + Delta-G solvation = 82.265651 kcal Electronic energy + Delta-G solvation = -32982.050030 eV Core-core repulsion = 28438.791976 eV Total energy + Delta-G solvation = -4543.258055 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 451.059 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -44.27846 -42.36849 -40.87992 -38.51131 -37.99445 -36.15779 -35.22910 -33.74711 -32.63153 -31.84130 -30.42543 -30.19263 -29.49703 -28.35934 -28.31753 -27.17555 -26.86315 -25.51742 -24.10541 -23.05176 -22.53384 -22.11075 -21.20551 -19.42980 -18.91600 -18.28395 -18.07957 -17.67671 -17.43526 -16.78214 -16.62525 -16.34426 -16.03148 -15.94454 -15.75598 -15.58269 -15.23841 -15.02853 -14.70997 -14.44244 -14.17319 -14.13305 -14.02162 -13.82566 -13.80468 -13.43080 -13.39848 -13.35859 -13.19699 -13.12124 -13.05518 -13.00409 -12.70242 -12.21258 -12.10583 -12.06158 -11.73594 -11.53404 -11.38027 -11.34639 -11.32082 -11.21359 -10.86436 -10.83056 -10.78419 -10.09272 -10.01149 -9.09934 -8.62946 -0.91212 -0.38929 0.19444 0.75719 0.90103 1.10188 1.27486 1.42718 1.51650 1.58385 1.65069 1.69752 1.89043 1.92559 1.94419 1.99293 2.18034 2.35276 2.59743 2.80375 3.07660 3.19072 3.35449 3.46696 3.49707 3.75175 3.85093 3.98301 4.12676 4.27297 4.29698 4.39120 4.45861 4.50339 4.62037 4.71149 4.72837 4.75331 4.77292 4.84730 4.86374 4.88605 4.90229 4.95191 5.04480 5.25960 5.53328 5.56411 5.62708 5.67307 5.76360 6.08303 6.30600 6.38684 6.48715 6.69936 6.99702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.476 4.476 2 Si 1.096 2.904 3 C -0.457 4.457 4 C -0.459 4.459 5 C -0.189 4.189 6 N -0.340 5.340 7 C 0.037 3.963 8 C -0.025 4.025 9 N -0.616 5.616 10 C 0.577 3.423 11 O -0.550 6.550 12 C -0.163 4.163 13 C 0.164 3.836 14 N -0.357 5.357 15 C -0.083 4.083 16 C -0.051 4.051 17 O -0.551 6.551 18 Si 1.011 2.989 19 H -0.262 1.262 20 H -0.238 1.238 21 H -0.262 1.262 22 C 0.030 3.970 23 N -0.494 5.494 24 C 0.226 3.774 25 C -0.080 4.080 26 Br 0.006 6.994 27 C -0.023 4.023 28 C 0.026 3.974 29 N -0.319 5.319 30 H 0.061 0.939 31 H 0.067 0.933 32 H 0.047 0.953 33 H 0.084 0.916 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.062 0.938 37 H 0.070 0.930 38 H 0.088 0.912 39 H 0.103 0.897 40 H 0.133 0.867 41 H 0.223 0.777 42 H 0.427 0.573 43 H 0.197 0.803 44 H 0.138 0.862 45 H 0.390 0.610 46 H 0.210 0.790 47 H 0.188 0.812 48 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.880 3.119 -1.575 6.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.580 4.580 2 Si 1.285 2.715 3 C -0.565 4.565 4 C -0.567 4.567 5 C -0.353 4.353 6 N -0.122 5.122 7 C -0.112 4.112 8 C -0.130 4.130 9 N -0.262 5.262 10 C 0.364 3.636 11 O -0.429 6.429 12 C -0.171 4.171 13 C 0.038 3.962 14 N -0.030 5.030 15 C -0.194 4.194 16 C -0.161 4.161 17 O -0.357 6.357 18 Si 0.830 3.170 19 H -0.185 1.185 20 H -0.161 1.161 21 H -0.186 1.186 22 C -0.120 4.120 23 N -0.213 5.213 24 C -0.019 4.019 25 C -0.163 4.163 26 Br 0.091 6.909 27 C -0.049 4.049 28 C -0.159 4.159 29 N -0.143 5.143 30 H 0.081 0.919 31 H 0.086 0.914 32 H 0.066 0.934 33 H 0.103 0.897 34 H 0.092 0.908 35 H 0.090 0.910 36 H 0.081 0.919 37 H 0.089 0.911 38 H 0.107 0.893 39 H 0.121 0.879 40 H 0.151 0.849 41 H 0.239 0.761 42 H 0.267 0.733 43 H 0.214 0.786 44 H 0.156 0.844 45 H 0.239 0.761 46 H 0.227 0.773 47 H 0.206 0.794 48 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 4.239 3.102 -1.358 5.425 hybrid contribution -0.114 -0.222 0.273 0.370 sum 4.125 2.880 -1.085 5.146 Atomic orbital electron populations 1.26517 1.24428 1.03107 1.03908 0.78231 0.63954 0.65735 0.63566 1.26164 1.07317 1.18105 1.04942 1.26226 1.07460 1.07754 1.15228 1.27375 1.06686 0.81784 1.19407 1.48292 1.14688 1.07681 1.41518 1.22581 1.00786 0.85110 1.02711 1.17681 0.98625 0.85436 1.11229 1.42301 1.23935 1.03789 1.56145 1.17496 0.83067 0.83823 0.79213 1.90750 1.26944 1.83356 1.41828 1.19026 0.97248 0.93314 1.07493 1.22273 1.00182 0.80323 0.93444 1.42698 1.16815 1.06921 1.36534 1.22451 1.00657 0.83779 1.12497 1.25044 0.92225 1.06673 0.92110 1.86503 1.55991 1.56433 1.36788 0.84850 0.80351 0.71715 0.80054 1.18543 1.16057 1.18557 1.22923 0.90181 1.01014 0.97857 1.70810 1.22941 1.03380 1.24205 1.20728 0.88720 0.92980 0.99507 1.20552 0.95827 0.92890 1.06999 1.96843 1.25744 1.95771 1.72544 1.21382 0.95456 0.95322 0.92716 1.24358 0.99647 0.92026 0.99867 1.77417 1.03167 1.12495 1.21182 0.91928 0.91381 0.93372 0.89651 0.90848 0.90992 0.91907 0.91120 0.89255 0.87890 0.84878 0.76099 0.73298 0.78585 0.84431 0.76110 0.77302 0.79442 0.79629 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.48 -0.15 8.65 113.37 0.98 0.83 16 2 Si 1.10 -8.87 12.79 68.60 0.88 -7.99 16 3 C -0.46 3.69 8.65 113.37 0.98 4.68 16 4 C -0.46 3.44 8.65 113.37 0.98 4.42 16 5 C -0.19 1.26 5.59 127.77 0.71 1.97 16 6 N -0.34 0.01 3.01 -182.91 -0.55 -0.54 16 7 C 0.04 -0.14 11.44 83.50 0.96 0.81 16 8 C -0.03 -0.03 6.90 37.63 0.26 0.23 16 9 N -0.62 1.97 5.42 -306.86 -1.66 0.30 16 10 C 0.58 0.86 7.73 86.70 0.67 1.53 16 11 O -0.55 -4.67 13.42 -4.09 -0.05 -4.73 16 12 C -0.16 0.15 5.84 -20.35 -0.12 0.03 16 13 C 0.16 0.18 9.91 83.65 0.83 1.01 16 14 N -0.36 -1.06 2.93 -337.70 -0.99 -2.05 16 15 C -0.08 -0.08 6.24 41.01 0.26 0.18 16 16 C -0.05 0.18 3.06 71.24 0.22 0.40 16 17 O -0.55 1.23 10.92 -148.98 -1.63 -0.40 16 18 Si 1.01 -4.71 26.60 68.60 1.83 -2.89 16 19 H -0.26 0.63 7.11 99.48 0.71 1.34 16 20 H -0.24 1.32 6.84 99.48 0.68 2.00 16 21 H -0.26 0.45 7.11 99.48 0.71 1.16 16 22 C 0.03 0.08 10.44 83.68 0.87 0.95 16 23 N -0.49 -3.99 11.30 -194.11 -2.19 -6.18 16 24 C 0.23 1.31 7.59 134.19 1.02 2.33 16 25 C -0.08 -0.14 6.24 22.42 0.14 0.00 16 26 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 27 C -0.02 0.08 9.26 22.56 0.21 0.29 16 28 C 0.03 0.21 10.84 85.34 0.92 1.14 16 29 N -0.32 -2.59 12.56 -56.76 -0.71 -3.31 16 30 H 0.06 0.09 7.96 -2.39 -0.02 0.07 16 31 H 0.07 -0.01 7.96 -2.39 -0.02 -0.03 16 32 H 0.05 0.24 7.96 -2.38 -0.02 0.23 16 33 H 0.08 -0.87 7.96 -2.39 -0.02 -0.89 16 34 H 0.07 -0.51 7.96 -2.39 -0.02 -0.53 16 35 H 0.07 -0.53 7.96 -2.39 -0.02 -0.55 16 36 H 0.06 -0.33 7.96 -2.39 -0.02 -0.35 16 37 H 0.07 -0.43 7.96 -2.39 -0.02 -0.45 16 38 H 0.09 -0.96 7.96 -2.38 -0.02 -0.98 16 39 H 0.10 -0.57 7.96 -2.39 -0.02 -0.58 16 40 H 0.13 -1.75 7.96 -2.39 -0.02 -1.76 16 41 H 0.22 -3.04 8.06 -2.91 -0.02 -3.07 16 42 H 0.43 -4.78 6.86 -92.71 -0.64 -5.41 16 43 H 0.20 0.18 6.20 -2.91 -0.02 0.17 16 44 H 0.14 -0.79 7.96 -2.39 -0.02 -0.81 16 45 H 0.39 -2.85 8.70 -74.05 -0.64 -3.49 16 46 H 0.21 -0.64 6.72 -2.91 -0.02 -0.66 16 47 H 0.19 -2.19 6.44 -2.91 -0.02 -2.21 16 48 H 0.19 2.03 5.91 -2.91 -0.02 2.01 16 Total: 0.00 -27.07 425.23 4.60 -22.47 By element: Atomic # 1 Polarization: -15.28 SS G_CDS: 0.49 Total: -14.79 kcal Atomic # 6 Polarization: 10.89 SS G_CDS: 9.89 Total: 20.78 kcal Atomic # 7 Polarization: -5.67 SS G_CDS: -6.11 Total: -11.78 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -1.68 Total: -5.13 kcal Atomic # 14 Polarization: -13.58 SS G_CDS: 2.70 Total: -10.88 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -27.07 4.60 -22.47 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16608520_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.735 kcal (2) G-P(sol) polarization free energy of solvation -27.071 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.469 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.266 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds