Wall clock time and date at job start Thu Mar 4 2021 12:58:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.46888 * 2 1 4 4 H 1.48502 * 109.47266 * 179.97438 * 3 2 1 5 5 H 1.48504 * 109.47004 * 59.99887 * 3 2 1 6 6 H 1.48500 * 109.47274 * 299.99876 * 3 2 1 7 7 C 1.50699 * 109.47215 * 119.99938 * 2 1 3 8 8 C 1.35011 * 126.42884 * 209.69398 * 7 2 1 9 9 N 1.33578 * 108.65277 * 179.83319 * 8 7 2 10 10 C 1.32416 * 109.22616 * 0.43540 * 9 8 7 11 11 C 1.41253 * 132.11614 * 179.69006 * 10 9 8 12 12 Br 1.89094 * 120.25555 * 0.04806 * 11 10 9 13 13 C 1.35706 * 119.48799 * 180.02562 * 11 10 9 14 14 C 1.41762 * 119.52901 * 0.02562 * 13 11 10 15 15 C 1.47580 * 120.00400 * 180.02562 * 14 13 11 16 16 O 1.21589 * 120.00304 * 52.81425 * 15 14 13 17 17 N 1.34782 * 119.99616 * 232.81049 * 15 14 13 18 18 C 1.46084 * 122.76748 * 5.47677 * 17 15 14 19 19 C 1.46011 * 114.87369 * 78.53615 * 18 17 15 20 20 C 1.56522 * 108.97417 * 60.18396 * 19 18 17 21 21 Si 1.83373 * 108.23903 * 291.77387 * 20 19 18 22 22 C 1.88353 * 111.35884 * 322.39481 * 21 20 19 23 23 C 1.56249 * 99.09306 * 221.45534 * 22 21 20 24 24 C 1.53714 * 109.68055 * 39.76776 * 23 22 21 25 25 C 1.55534 * 111.36029 * 311.79401 * 24 23 22 26 26 C 1.87791 * 113.96218 * 86.63040 * 21 20 19 27 27 C 1.44790 * 122.75670 * 185.18667 * 17 15 14 28 28 C 1.36496 * 119.98538 * 0.02562 * 14 13 11 29 29 N 1.35943 * 120.50181 * 359.97031 * 28 14 13 30 30 H 0.96693 * 113.99822 * 299.99878 * 1 2 3 31 31 H 1.08993 * 109.47213 * 240.00184 * 2 1 3 32 32 H 1.08001 * 125.67061 * 359.97438 * 8 7 2 33 33 H 1.07996 * 120.23190 * 180.02562 * 13 11 10 34 34 H 1.08995 * 108.40529 * 199.93799 * 18 17 15 35 35 H 1.09004 * 108.40604 * 317.31793 * 18 17 15 36 36 H 1.08997 * 109.55503 * 180.02562 * 19 18 17 37 37 H 1.08998 * 109.55799 * 300.23544 * 19 18 17 38 38 H 1.08996 * 109.71160 * 51.45758 * 20 19 18 39 39 H 1.08999 * 109.71275 * 172.04333 * 20 19 18 40 40 H 1.09004 * 111.47065 * 338.93038 * 22 21 20 41 41 H 1.09001 * 111.47346 * 103.98843 * 22 21 20 42 42 H 1.09000 * 109.44076 * 279.69330 * 23 22 21 43 43 H 1.09001 * 109.39185 * 159.80881 * 23 22 21 44 44 H 1.08999 * 109.11326 * 191.29588 * 24 23 22 45 45 H 1.09004 * 109.02804 * 72.23782 * 24 23 22 46 46 H 1.09000 * 111.11113 * 270.26256 * 25 24 23 47 47 H 1.08996 * 111.14895 * 146.14318 * 25 24 23 48 48 H 1.08997 * 110.13430 * 80.06726 * 26 21 20 49 49 H 1.09002 * 110.13375 * 201.81703 * 26 21 20 50 50 H 1.09000 * 110.04256 * 50.60806 * 27 17 15 51 51 H 1.09009 * 110.03656 * 172.10161 * 27 17 15 52 52 H 1.07998 * 119.74814 * 180.02562 * 28 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 1 3.5350 1.7566 0.0006 5 1 1.5549 2.4565 1.2125 6 1 1.5549 2.4565 -1.2125 7 6 1.9314 -0.7104 1.2305 8 6 3.0883 -0.4650 1.8817 9 7 3.1766 -1.2962 2.9237 10 6 2.1070 -2.0763 2.9510 11 6 1.7130 -3.1133 3.8254 12 35 2.8134 -3.5988 5.2846 13 6 0.5385 -3.7582 3.6105 14 6 -0.2745 -3.3817 2.5118 15 6 -1.5540 -4.0756 2.2685 16 8 -2.3738 -4.1701 3.1615 17 7 -1.8139 -4.6046 1.0564 18 6 -0.8299 -4.6293 -0.0230 19 6 0.1826 -5.6750 0.0928 20 6 -0.5254 -7.0710 0.0933 21 14 -1.4797 -7.2299 1.6510 22 6 -0.5594 -6.4570 3.1013 23 6 -0.8503 -7.5436 4.1858 24 6 -0.7612 -8.9421 3.5542 25 6 -1.5695 -9.0171 2.2275 26 6 -3.2124 -6.5115 1.5607 27 6 -3.0896 -5.2006 0.7189 28 6 0.1266 -2.3773 1.6790 29 7 1.3031 -1.7311 1.8941 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5138 -0.8899 32 1 3.8195 0.2809 1.6072 33 1 0.2253 -4.5526 4.2717 34 1 -1.3578 -4.7644 -0.9669 35 1 -0.3231 -3.6646 -0.0488 36 1 0.8683 -5.6141 -0.7523 37 1 0.7367 -5.5450 1.0224 38 1 -1.2000 -7.1413 -0.7599 39 1 0.2221 -7.8623 0.0370 40 1 0.5080 -6.3726 2.8972 41 1 -0.9873 -5.4932 3.3774 42 1 -1.8503 -7.3920 4.5921 43 1 -0.1166 -7.4602 4.9875 44 1 -1.1577 -9.6764 4.2555 45 1 0.2840 -9.1734 3.3488 46 1 -2.6005 -9.3187 2.4124 47 1 -1.0898 -9.6850 1.5120 48 1 -3.8843 -7.2134 1.0669 49 1 -3.5765 -6.2830 2.5623 50 1 -3.9003 -4.5199 0.9786 51 1 -3.1229 -5.4340 -0.3454 52 1 -0.4959 -2.0934 0.8434 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16608542_12335884.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:58:52 Heat of formation + Delta-G solvation = 29.154853 kcal Electronic energy + Delta-G solvation = -37025.465176 eV Core-core repulsion = 32583.444408 eV Total energy + Delta-G solvation = -4442.020768 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 451.084 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -44.28315 -41.92196 -38.67027 -38.04875 -37.98540 -36.22195 -35.30891 -34.11530 -32.90282 -31.84145 -31.12558 -29.99399 -29.70057 -27.43229 -26.86253 -25.89571 -24.84001 -24.39384 -23.58280 -22.70193 -22.44595 -21.08882 -20.52057 -19.42580 -18.74653 -17.86055 -17.74699 -17.63247 -17.24395 -16.72948 -16.36467 -16.16706 -15.96517 -15.84526 -15.79442 -15.49004 -15.22351 -15.08580 -14.83297 -14.60790 -14.52804 -14.37117 -14.01768 -13.60313 -13.50393 -13.46356 -13.37889 -13.08612 -12.83921 -12.71046 -12.59590 -12.40584 -12.31361 -12.10611 -12.05896 -11.97894 -11.71724 -11.61426 -11.51728 -11.39231 -11.36004 -11.30636 -11.13551 -10.84298 -10.50782 -10.38694 -10.17149 -10.05597 -9.73256 -9.05163 -0.86791 -0.31392 0.18533 0.94196 1.04776 1.45613 1.53702 1.58828 1.61811 1.74236 1.74970 1.90217 1.99107 2.06366 2.12056 2.69458 2.82825 2.97734 3.10854 3.34955 3.45849 3.50333 3.80928 3.84765 4.06919 4.10168 4.10900 4.14120 4.24985 4.31248 4.34008 4.39079 4.42575 4.50832 4.53218 4.54455 4.58637 4.62839 4.66044 4.82071 4.90211 4.93370 4.95876 5.02332 5.05602 5.07527 5.12701 5.26152 5.28714 5.29573 5.35761 5.40516 5.47640 5.48958 5.59472 5.62414 6.21037 6.39479 6.52550 6.86443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.040 4.040 3 Si 1.002 2.998 4 H -0.243 1.243 5 H -0.269 1.269 6 H -0.258 1.258 7 C -0.078 4.078 8 C 0.026 3.974 9 N -0.498 5.498 10 C 0.227 3.773 11 C -0.080 4.080 12 Br -0.005 7.005 13 C -0.024 4.024 14 C -0.161 4.161 15 C 0.597 3.403 16 O -0.542 6.542 17 N -0.599 5.599 18 C 0.082 3.918 19 C -0.134 4.134 20 C -0.402 4.402 21 Si 1.029 2.971 22 C -0.453 4.453 23 C -0.118 4.118 24 C -0.119 4.119 25 C -0.424 4.424 26 C -0.429 4.429 27 C 0.115 3.885 28 C 0.140 3.860 29 N -0.350 5.350 30 H 0.390 0.610 31 H 0.150 0.850 32 H 0.208 0.792 33 H 0.162 0.838 34 H 0.124 0.876 35 H 0.078 0.922 36 H 0.100 0.900 37 H 0.055 0.945 38 H 0.102 0.898 39 H 0.082 0.918 40 H 0.074 0.926 41 H 0.089 0.911 42 H 0.051 0.949 43 H 0.056 0.944 44 H 0.052 0.948 45 H 0.061 0.939 46 H 0.070 0.930 47 H 0.080 0.920 48 H 0.094 0.906 49 H 0.062 0.938 50 H 0.069 0.931 51 H 0.130 0.870 52 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.442 0.954 -10.136 10.282 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.150 4.150 3 Si 0.823 3.177 4 H -0.166 1.166 5 H -0.193 1.193 6 H -0.182 1.182 7 C -0.190 4.190 8 C -0.123 4.123 9 N -0.217 5.217 10 C -0.018 4.018 11 C -0.163 4.163 12 Br 0.080 6.920 13 C -0.050 4.050 14 C -0.169 4.169 15 C 0.386 3.614 16 O -0.420 6.420 17 N -0.331 5.331 18 C -0.040 4.040 19 C -0.172 4.172 20 C -0.490 4.490 21 Si 1.219 2.781 22 C -0.535 4.535 23 C -0.156 4.156 24 C -0.157 4.157 25 C -0.508 4.508 26 C -0.515 4.515 27 C -0.007 4.007 28 C 0.015 3.985 29 N -0.023 5.023 30 H 0.239 0.761 31 H 0.167 0.833 32 H 0.225 0.775 33 H 0.180 0.820 34 H 0.142 0.858 35 H 0.096 0.904 36 H 0.118 0.882 37 H 0.074 0.926 38 H 0.120 0.880 39 H 0.101 0.899 40 H 0.092 0.908 41 H 0.107 0.893 42 H 0.070 0.930 43 H 0.075 0.925 44 H 0.071 0.929 45 H 0.079 0.921 46 H 0.089 0.911 47 H 0.099 0.901 48 H 0.113 0.887 49 H 0.081 0.919 50 H 0.087 0.913 51 H 0.148 0.852 52 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges -0.414 1.343 -9.190 9.297 hybrid contribution -0.829 -0.445 0.901 1.303 sum -1.243 0.898 -8.289 8.429 Atomic orbital electron populations 1.86441 1.17112 1.81404 1.50402 1.24898 0.84846 1.10526 0.94775 0.84953 0.80589 0.71921 0.80250 1.16587 1.19327 1.18177 1.22439 0.97650 0.96191 1.02680 1.22924 0.97187 1.00402 0.91827 1.70804 1.20354 1.08273 1.22257 1.20447 0.90194 0.99602 0.91592 1.20450 0.98344 0.99509 0.97962 1.96806 1.66486 1.90825 1.37871 1.21351 0.90265 0.97668 0.95695 1.19345 0.97932 1.01241 0.98376 1.17188 0.84625 0.77352 0.82244 1.90884 1.48323 1.59288 1.43542 1.47639 1.15777 1.57575 1.12111 1.20710 0.92009 1.00507 0.90741 1.20998 0.98432 0.94127 1.03660 1.26276 1.07857 0.99538 1.15361 0.79332 0.66858 0.65124 0.66822 1.27955 1.07569 1.03103 1.14893 1.21906 1.00941 0.94080 0.98658 1.21807 1.00349 0.96525 0.96979 1.26764 1.01987 1.20473 1.01538 1.27416 1.18559 1.02576 1.02988 1.21874 0.83935 0.93522 1.01326 1.22431 0.85843 0.91220 0.99011 1.42654 1.14958 1.23926 1.20759 0.76115 0.83296 0.77535 0.82036 0.85802 0.90360 0.88169 0.92600 0.87984 0.89871 0.90766 0.89302 0.92976 0.92501 0.92879 0.92055 0.91086 0.90102 0.88691 0.91864 0.91255 0.85161 0.77021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 4.73 10.90 -148.98 -1.62 3.11 16 2 C -0.04 0.34 3.06 71.24 0.22 0.55 16 3 Si 1.00 -7.21 26.62 68.60 1.83 -5.38 16 4 H -0.24 1.72 6.83 99.48 0.68 2.40 16 5 H -0.27 0.98 7.11 99.48 0.71 1.68 16 6 H -0.26 1.23 7.11 99.48 0.71 1.93 16 7 C -0.08 0.17 6.24 41.01 0.26 0.42 16 8 C 0.03 0.04 10.44 83.68 0.87 0.91 16 9 N -0.50 -4.18 11.30 -194.10 -2.19 -6.37 16 10 C 0.23 1.49 7.59 134.19 1.02 2.51 16 11 C -0.08 -0.51 6.24 22.42 0.14 -0.37 16 12 Br -0.01 -0.04 33.72 -20.37 -0.69 -0.72 16 13 C -0.02 -0.09 8.16 22.55 0.18 0.09 16 14 C -0.16 -0.08 4.59 -20.35 -0.09 -0.17 16 15 C 0.60 0.66 3.85 86.71 0.33 0.99 16 16 O -0.54 -4.80 14.88 -4.00 -0.06 -4.86 16 17 N -0.60 3.19 1.63 -836.75 -1.36 1.83 16 18 C 0.08 -0.85 4.61 84.31 0.39 -0.46 16 19 C -0.13 1.14 5.66 29.68 0.17 1.31 16 20 C -0.40 3.22 4.83 73.21 0.35 3.58 16 21 Si 1.03 -3.75 8.75 68.60 0.60 -3.15 16 22 C -0.45 -0.78 3.15 73.11 0.23 -0.55 16 23 C -0.12 -0.49 5.96 31.96 0.19 -0.30 16 24 C -0.12 -0.35 6.09 31.71 0.19 -0.15 16 25 C -0.42 -0.03 5.84 72.86 0.43 0.39 16 26 C -0.43 1.14 4.99 73.12 0.36 1.50 16 27 C 0.11 -0.72 5.82 87.84 0.51 -0.21 16 28 C 0.14 -0.40 8.18 83.65 0.68 0.29 16 29 N -0.35 -0.21 2.93 -337.71 -0.99 -1.20 16 30 H 0.39 -4.80 8.70 -74.06 -0.64 -5.44 16 31 H 0.15 -1.82 7.96 -2.39 -0.02 -1.84 16 32 H 0.21 -0.82 6.73 -2.91 -0.02 -0.84 16 33 H 0.16 0.72 5.91 -2.91 -0.02 0.70 16 34 H 0.12 -1.96 7.19 -2.39 -0.02 -1.98 16 35 H 0.08 -0.91 4.83 -2.38 -0.01 -0.92 16 36 H 0.10 -1.06 8.14 -2.39 -0.02 -1.08 16 37 H 0.06 -0.27 6.08 -2.39 -0.01 -0.29 16 38 H 0.10 -1.19 7.93 -2.39 -0.02 -1.21 16 39 H 0.08 -0.59 7.95 -2.39 -0.02 -0.61 16 40 H 0.07 0.10 6.77 -2.38 -0.02 0.08 16 41 H 0.09 0.34 1.81 -2.39 0.00 0.34 16 42 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 43 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 44 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 45 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.07 0.06 8.03 -2.39 -0.02 0.04 16 47 H 0.08 -0.11 8.03 -2.39 -0.02 -0.13 16 48 H 0.09 -0.52 8.00 -2.39 -0.02 -0.54 16 49 H 0.06 0.23 7.37 -2.39 -0.02 0.21 16 50 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 51 H 0.13 -1.76 7.19 -2.38 -0.02 -1.78 16 52 H 0.21 -1.80 5.63 -2.91 -0.02 -1.82 16 Total: 0.00 -19.94 402.05 3.02 -16.93 By element: Atomic # 1 Polarization: -11.58 SS G_CDS: 1.07 Total: -10.51 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: 6.44 Total: 10.34 kcal Atomic # 7 Polarization: -1.20 SS G_CDS: -4.55 Total: -5.75 kcal Atomic # 8 Polarization: -0.07 SS G_CDS: -1.68 Total: -1.75 kcal Atomic # 14 Polarization: -10.96 SS G_CDS: 2.43 Total: -8.53 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -0.69 Total: -0.72 kcal Total: -19.94 3.02 -16.93 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16608542_12335884.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.083 kcal (2) G-P(sol) polarization free energy of solvation -19.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.138 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.928 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds