Wall clock time and date at job start Thu Mar 4 2021 12:27:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28473 * 124.88728 * 2 1 4 4 C 1.31810 * 110.07693 * 180.02562 * 3 2 1 5 5 C 1.47710 * 126.51957 * 179.97438 * 4 3 2 6 6 O 1.21575 * 119.99653 * 180.02562 * 5 4 3 7 7 N 1.34770 * 119.99984 * 0.02562 * 5 4 3 8 8 C 1.46496 * 120.00000 * 179.97438 * 7 5 4 9 9 C 1.53000 * 109.46979 * 180.02562 * 8 7 5 10 10 C 1.53002 * 109.47054 * 180.02562 * 9 8 7 11 11 H 1.09008 * 112.90525 * 316.25073 * 10 9 8 12 12 C 1.53775 * 113.61545 * 87.50539 * 10 9 8 13 13 C 1.53779 * 87.08438 * 139.98327 * 12 10 9 14 14 H 1.09002 * 113.61731 * 89.11293 * 13 12 10 15 15 N 1.46500 * 113.68825 * 220.00754 * 13 12 10 16 16 C 1.34778 * 119.99919 * 254.05902 * 15 13 12 17 17 O 1.21506 * 120.00090 * 0.02562 * 16 15 13 18 18 O 1.34640 * 119.99840 * 179.97438 * 16 15 13 19 19 C 1.45199 * 116.99746 * 179.97438 * 18 16 15 20 20 C 1.53008 * 109.47026 * 60.00366 * 19 18 16 21 21 C 1.52998 * 109.47162 * 180.02562 * 19 18 16 22 22 C 1.52996 * 109.47402 * 300.00207 * 19 18 16 23 23 C 1.53777 * 113.61665 * 185.00286 * 10 9 8 24 24 C 1.41504 * 106.95952 * 0.25889 * 4 3 2 25 25 C 1.35038 * 124.88365 * 179.97438 * 2 1 3 26 26 C 1.50701 * 126.38577 * 0.02562 * 25 2 1 27 27 O 1.42894 * 109.46927 * 30.00018 * 26 25 2 28 28 Si 1.86297 * 109.46961 * 149.99840 * 26 25 2 29 29 H 1.08999 * 109.47214 * 90.02684 * 1 2 3 30 30 H 1.08997 * 109.46805 * 210.03243 * 1 2 3 31 31 H 1.08995 * 109.47056 * 330.02731 * 1 2 3 32 32 H 0.97005 * 119.99810 * 0.02562 * 7 5 4 33 33 H 1.09000 * 109.47325 * 60.00493 * 8 7 5 34 34 H 1.08998 * 109.47211 * 299.99990 * 8 7 5 35 35 H 1.09003 * 109.47225 * 60.00154 * 9 8 7 36 36 H 1.09000 * 109.47608 * 299.99966 * 9 8 7 37 37 H 1.08993 * 113.61636 * 25.42691 * 12 10 9 38 38 H 1.09008 * 113.61006 * 254.52934 * 12 10 9 39 39 H 0.96998 * 119.99853 * 74.06469 * 15 13 12 40 40 H 1.09001 * 109.46645 * 59.99999 * 20 19 18 41 41 H 1.09000 * 109.46975 * 179.97438 * 20 19 18 42 42 H 1.08997 * 109.46875 * 299.99642 * 20 19 18 43 43 H 1.09002 * 109.46988 * 60.00255 * 21 19 18 44 44 H 1.09000 * 109.47643 * 180.02562 * 21 19 18 45 45 H 1.09001 * 109.47538 * 300.00630 * 21 19 18 46 46 H 1.09004 * 109.46917 * 60.00056 * 22 19 18 47 47 H 1.09003 * 109.47168 * 179.97438 * 22 19 18 48 48 H 1.09000 * 109.47701 * 299.99987 * 22 19 18 49 49 H 1.08997 * 113.61941 * 105.46517 * 23 10 9 50 50 H 1.09005 * 113.61136 * 334.56681 * 23 10 9 51 51 H 1.08005 * 127.24529 * 179.74449 * 24 4 3 52 52 H 1.08993 * 109.46674 * 269.99478 * 26 25 2 53 53 H 0.96700 * 114.00819 * 59.99856 * 27 26 25 54 54 H 1.48505 * 110.00436 * 58.67929 * 28 26 25 55 55 H 1.48502 * 110.00184 * 180.02562 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7169 -0.0006 5 6 4.6274 1.6398 -0.0013 6 8 5.7598 1.1976 -0.0022 7 7 4.4242 2.9721 -0.0009 8 6 5.5680 3.8875 -0.0010 9 6 5.0648 5.3324 0.0001 10 6 6.2594 6.2884 -0.0007 11 1 7.0446 5.9869 0.6928 12 6 6.7772 6.6261 -1.4087 13 6 6.9634 8.0684 -0.9089 14 1 7.9411 8.2536 -0.4638 15 7 6.5842 9.0858 -1.8925 16 6 7.5370 9.7878 -2.5373 17 8 8.7105 9.5767 -2.3032 18 8 7.1885 10.7224 -3.4417 19 6 8.2673 11.4401 -4.0970 20 6 9.1549 10.4484 -4.8519 21 6 7.6812 12.4532 -5.0824 22 6 9.1026 12.1753 -3.0470 23 6 5.8634 7.7692 0.1233 24 6 3.5272 -0.6971 -0.0071 25 6 2.2373 -1.1077 0.0005 26 6 1.7534 -2.5349 0.0006 27 8 0.4957 -2.6114 -0.6735 28 14 2.9948 -3.6116 -0.8770 29 1 -0.3633 -0.0005 -1.0276 30 1 -0.3633 -0.8897 0.5143 31 1 -0.3633 0.8902 0.5134 32 1 3.5206 3.3250 0.0002 33 1 6.1724 3.7137 -0.8913 34 1 6.1730 3.7132 0.8887 35 1 4.4606 5.5060 0.8906 36 1 4.4595 5.5072 -0.8894 37 1 6.0208 6.5279 -2.1873 38 1 7.7130 6.1272 -1.6610 39 1 5.6475 9.2541 -2.0796 40 1 8.5597 9.9247 -5.6000 41 1 9.9645 10.9872 -5.3442 42 1 9.5725 9.7270 -4.1496 43 1 7.0491 13.1596 -4.5443 44 1 8.4910 12.9916 -5.5748 45 1 7.0857 11.9298 -5.8306 46 1 9.5202 11.4539 -2.3447 47 1 9.9127 12.7137 -3.5390 48 1 8.4704 12.8818 -2.5092 49 1 6.0613 8.1932 1.1077 50 1 4.8571 7.9836 -0.2365 51 1 4.4109 -1.3181 -0.0131 52 1 1.6364 -2.8788 1.0282 53 1 0.5249 -2.3202 -1.5951 54 1 4.3155 -3.5160 -0.2046 55 1 2.5290 -5.0217 -0.8844 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13259642.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:06 Heat of formation + Delta-G solvation = -51.145255 kcal Electronic energy + Delta-G solvation = -34312.867921 eV Core-core repulsion = 29547.127454 eV Total energy + Delta-G solvation = -4765.740467 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.214 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -43.85977 -41.89734 -40.71099 -40.19856 -38.04323 -38.00789 -36.37134 -35.37538 -34.48291 -34.21599 -32.73020 -31.44728 -28.57374 -28.38915 -28.31746 -26.93743 -26.67907 -26.03769 -24.39539 -23.35353 -22.27667 -22.10088 -21.39989 -20.93914 -20.35480 -19.16384 -19.10554 -17.78881 -17.60925 -17.50956 -17.21901 -17.13959 -16.90368 -16.69320 -16.46591 -16.10674 -15.85188 -15.61413 -15.55355 -15.41150 -15.10808 -15.03510 -14.82432 -14.50844 -14.02039 -13.84692 -13.65970 -13.55136 -13.43574 -13.38509 -13.36520 -13.17098 -12.93476 -12.88309 -12.84234 -12.62804 -12.60603 -12.39245 -12.35973 -12.28486 -11.87386 -11.83782 -11.71486 -11.41172 -11.25193 -11.20483 -11.10127 -10.93309 -10.34827 -10.12713 -10.02779 -9.98382 -4.97933 0.41914 0.78930 1.18165 1.19291 1.54196 1.70659 1.73294 1.96635 2.12159 2.26989 3.15510 3.18640 3.31085 3.35000 3.49992 3.51837 3.72720 3.77309 3.83348 3.85259 3.92800 3.97452 4.14053 4.29711 4.30800 4.35806 4.36441 4.42604 4.49788 4.52452 4.59114 4.59821 4.63967 4.66962 4.74382 4.75379 4.77823 4.79286 4.83819 4.85882 4.88890 4.96787 5.00787 5.05061 5.13371 5.18577 5.21660 5.25040 5.27389 5.33987 5.37243 5.55997 5.61614 5.66651 6.36238 6.41321 6.56638 6.80565 7.09600 7.34420 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.258 5.258 3 N -0.258 5.258 4 C -0.039 4.039 5 C 0.600 3.400 6 O -0.573 6.573 7 N -0.705 5.705 8 C 0.118 3.882 9 C -0.106 4.106 10 C -0.097 4.097 11 H 0.098 0.902 12 C -0.149 4.149 13 C 0.129 3.871 14 H 0.098 0.902 15 N -0.689 5.689 16 C 0.641 3.359 17 O -0.597 6.597 18 O -0.370 6.370 19 C 0.127 3.873 20 C -0.180 4.180 21 C -0.137 4.137 22 C -0.180 4.180 23 C -0.124 4.124 24 C -0.199 4.199 25 C -0.006 4.006 26 C -0.033 4.033 27 O -0.542 6.542 28 Si 0.786 3.214 29 H 0.111 0.889 30 H 0.115 0.885 31 H 0.100 0.900 32 H 0.417 0.583 33 H 0.060 0.940 34 H 0.061 0.939 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.095 0.905 38 H 0.060 0.940 39 H 0.417 0.583 40 H 0.061 0.939 41 H 0.086 0.914 42 H 0.062 0.938 43 H 0.070 0.930 44 H 0.098 0.902 45 H 0.069 0.931 46 H 0.062 0.938 47 H 0.086 0.914 48 H 0.062 0.938 49 H 0.084 0.916 50 H 0.108 0.892 51 H 0.158 0.842 52 H 0.128 0.872 53 H 0.398 0.602 54 H -0.293 1.293 55 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.216 1.842 -2.591 9.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.047 5.047 3 N -0.096 5.096 4 C -0.196 4.196 5 C 0.385 3.615 6 O -0.451 6.451 7 N -0.357 5.357 8 C -0.005 4.005 9 C -0.144 4.144 10 C -0.117 4.117 11 H 0.116 0.884 12 C -0.188 4.188 13 C 0.026 3.974 14 H 0.117 0.883 15 N -0.348 5.348 16 C 0.395 3.605 17 O -0.488 6.488 18 O -0.285 6.285 19 C 0.091 3.909 20 C -0.237 4.237 21 C -0.194 4.194 22 C -0.237 4.237 23 C -0.162 4.162 24 C -0.227 4.227 25 C -0.131 4.131 26 C -0.145 4.145 27 O -0.350 6.350 28 Si 0.690 3.310 29 H 0.129 0.871 30 H 0.133 0.867 31 H 0.119 0.881 32 H 0.253 0.747 33 H 0.079 0.921 34 H 0.079 0.921 35 H 0.106 0.894 36 H 0.103 0.897 37 H 0.113 0.887 38 H 0.079 0.921 39 H 0.255 0.745 40 H 0.080 0.920 41 H 0.105 0.895 42 H 0.081 0.919 43 H 0.089 0.911 44 H 0.117 0.883 45 H 0.088 0.912 46 H 0.081 0.919 47 H 0.105 0.895 48 H 0.081 0.919 49 H 0.103 0.897 50 H 0.126 0.874 51 H 0.176 0.824 52 H 0.145 0.855 53 H 0.249 0.751 54 H -0.220 1.220 55 H -0.207 1.207 Dipole moment (debyes) X Y Z Total from point charges -8.316 1.575 -1.913 8.677 hybrid contribution 0.148 -0.268 0.604 0.678 sum -8.168 1.307 -1.308 8.375 Atomic orbital electron populations 1.22686 0.70221 1.06617 1.06676 1.45735 1.09115 1.01603 1.48236 1.73463 1.02370 1.14654 1.19153 1.21747 0.91064 0.94151 1.12680 1.17090 0.86298 0.82354 0.75758 1.90794 1.24165 1.77945 1.52204 1.45788 1.11604 1.04650 1.73645 1.21487 0.87999 0.89113 1.01948 1.21670 0.97753 0.90628 1.04327 1.22199 0.98104 0.94313 0.97062 0.88355 1.23630 1.02024 0.95199 0.97912 1.22645 1.00256 0.85520 0.88991 0.88350 1.44808 1.08846 1.38880 1.42251 1.18478 0.84874 0.78639 0.78536 1.90900 1.18292 1.70856 1.68731 1.86310 1.41126 1.48842 1.52178 1.22341 0.85097 0.91264 0.92219 1.22473 1.00474 1.00144 1.00636 1.21890 1.02677 0.97259 0.97616 1.22474 1.00803 1.00845 0.99607 1.23385 0.98958 0.94799 0.99026 1.21622 0.97341 0.93841 1.09946 1.22117 0.90565 0.92322 1.08140 1.24769 0.94651 0.91976 1.03079 1.86477 1.28738 1.89019 1.30744 0.93201 0.73485 0.75698 0.88651 0.87115 0.86661 0.88111 0.74657 0.92134 0.92059 0.89444 0.89682 0.88684 0.92092 0.74541 0.91963 0.89484 0.91918 0.91107 0.88344 0.91164 0.91906 0.89482 0.91869 0.89706 0.87367 0.82410 0.85466 0.75111 1.21995 1.20665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.67 10.12 127.77 1.29 0.63 16 2 N -0.26 0.21 3.70 -355.93 -1.32 -1.10 16 3 N -0.26 -0.90 11.67 -48.17 -0.56 -1.47 16 4 C -0.04 -0.28 7.13 42.46 0.30 0.02 16 5 C 0.60 5.74 7.82 86.75 0.68 6.41 16 6 O -0.57 -9.80 16.93 -3.95 -0.07 -9.86 16 7 N -0.71 -1.62 5.55 -466.11 -2.59 -4.21 16 8 C 0.12 0.01 5.67 86.38 0.49 0.50 16 9 C -0.11 0.70 5.17 30.60 0.16 0.86 16 10 C -0.10 0.54 3.65 -10.27 -0.04 0.51 16 11 H 0.10 -0.46 8.13 -2.38 -0.02 -0.48 16 12 C -0.15 0.36 7.43 31.12 0.23 0.59 16 13 C 0.13 -0.14 4.22 45.52 0.19 0.05 16 14 H 0.10 0.33 7.50 -2.39 -0.02 0.31 16 15 N -0.69 -0.34 5.37 -567.61 -3.05 -3.38 16 16 C 0.64 4.77 8.06 129.79 1.05 5.82 16 17 O -0.60 -7.91 11.50 19.82 0.23 -7.68 16 18 O -0.37 -2.24 9.94 -55.49 -0.55 -2.79 16 19 C 0.13 0.46 1.13 -10.79 -0.01 0.45 16 20 C -0.18 -0.76 8.37 71.98 0.60 -0.16 16 21 C -0.14 0.23 8.85 71.98 0.64 0.87 16 22 C -0.18 -0.72 8.37 71.98 0.60 -0.11 16 23 C -0.12 0.85 7.39 31.12 0.23 1.07 16 24 C -0.20 -1.09 9.35 22.41 0.21 -0.88 16 25 C -0.01 0.00 6.18 41.40 0.26 0.26 16 26 C -0.03 0.15 2.87 71.24 0.20 0.36 16 27 O -0.54 4.15 10.40 -148.98 -1.55 2.60 16 28 Si 0.79 -2.72 31.35 68.60 2.15 -0.57 16 29 H 0.11 -1.43 8.14 -2.39 -0.02 -1.45 16 30 H 0.12 -1.12 6.77 -2.39 -0.02 -1.13 16 31 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 32 H 0.42 -0.82 8.20 -92.70 -0.76 -1.58 16 33 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 34 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 35 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 36 H 0.08 -0.70 7.84 -2.39 -0.02 -0.72 16 37 H 0.09 -0.35 7.89 -2.39 -0.02 -0.37 16 38 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 39 H 0.42 -1.91 8.82 -92.71 -0.82 -2.73 16 40 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 41 H 0.09 0.06 8.14 -2.39 -0.02 0.04 16 42 H 0.06 0.62 5.88 -2.39 -0.01 0.60 16 43 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 44 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 45 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 46 H 0.06 0.60 5.88 -2.39 -0.01 0.58 16 47 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 48 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 49 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 50 H 0.11 -1.08 8.07 -2.38 -0.02 -1.10 16 51 H 0.16 0.99 6.83 -2.91 -0.02 0.97 16 52 H 0.13 -0.58 7.96 -2.39 -0.02 -0.60 16 53 H 0.40 -5.87 8.70 -74.06 -0.64 -6.52 16 54 H -0.29 -1.13 6.83 99.48 0.68 -0.45 16 55 H -0.28 -0.54 7.11 99.48 0.71 0.16 16 Total: 0.00 -26.65 444.60 -1.50 -28.15 By element: Atomic # 1 Polarization: -15.64 SS G_CDS: -1.28 Total: -16.93 kcal Atomic # 6 Polarization: 10.15 SS G_CDS: 7.08 Total: 17.24 kcal Atomic # 7 Polarization: -2.65 SS G_CDS: -7.51 Total: -10.16 kcal Atomic # 8 Polarization: -15.79 SS G_CDS: -1.94 Total: -17.73 kcal Atomic # 14 Polarization: -2.72 SS G_CDS: 2.15 Total: -0.57 kcal Total: -26.65 -1.50 -28.15 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13259642.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.993 kcal (2) G-P(sol) polarization free energy of solvation -26.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.642 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds