Wall clock time and date at job start Thu Mar 4 2021 12:27:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.46813 * 2 1 4 4 C 1.52999 * 109.46865 * 240.00355 * 2 1 3 5 5 O 1.45196 * 109.46757 * 119.99708 * 2 1 3 6 6 C 1.34638 * 117.00032 * 60.00619 * 5 2 1 7 7 O 1.21515 * 119.99856 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00212 * 179.97438 * 6 5 2 9 9 C 1.46494 * 120.00224 * 179.97438 * 8 6 5 10 10 H 1.09000 * 112.84904 * 23.80025 * 9 8 6 11 11 C 1.53778 * 113.61709 * 154.99953 * 9 8 6 12 12 C 1.53773 * 87.08299 * 139.97946 * 11 9 8 13 13 H 1.09007 * 113.61722 * 89.20062 * 12 11 9 14 14 C 1.53002 * 113.61420 * 220.01911 * 12 11 9 15 15 C 1.53007 * 109.47161 * 185.00211 * 14 12 11 16 16 N 1.46495 * 109.47016 * 180.02562 * 15 14 12 17 17 C 1.34783 * 120.00024 * 180.02562 * 16 15 14 18 18 O 1.21513 * 119.99590 * 359.97438 * 17 16 15 19 19 C 1.48167 * 120.00073 * 179.97438 * 17 16 15 20 20 N 1.32721 * 119.72387 * 359.97438 * 19 17 16 21 21 C 1.31524 * 121.64041 * 179.97438 * 20 19 17 22 22 C 1.38558 * 120.90318 * 0.02562 * 21 20 19 23 23 C 1.50703 * 120.32118 * 180.02562 * 22 21 20 24 24 O 1.42896 * 109.46995 * 120.00109 * 23 22 21 25 25 Si 1.86306 * 109.46927 * 0.02562 * 23 22 21 26 26 C 1.38625 * 119.35395 * 359.97438 * 22 21 20 27 27 C 1.38590 * 118.48819 * 359.97438 * 26 22 21 28 28 C 1.53778 * 87.08215 * 334.56524 * 12 11 9 29 29 H 1.08998 * 109.46950 * 300.00523 * 1 2 3 30 30 H 1.09003 * 109.46831 * 59.99857 * 1 2 3 31 31 H 1.08994 * 109.47326 * 179.97438 * 1 2 3 32 32 H 1.09004 * 109.46889 * 180.02562 * 3 2 1 33 33 H 1.08999 * 109.47262 * 299.99300 * 3 2 1 34 34 H 1.08991 * 109.47564 * 60.00306 * 3 2 1 35 35 H 1.09001 * 109.46750 * 299.99284 * 4 2 1 36 36 H 1.08990 * 109.47768 * 59.99647 * 4 2 1 37 37 H 1.08996 * 109.46966 * 180.02562 * 4 2 1 38 38 H 0.97001 * 119.99407 * 359.97438 * 8 6 5 39 39 H 1.08997 * 113.61233 * 25.42982 * 11 9 8 40 40 H 1.09005 * 113.61618 * 254.53188 * 11 9 8 41 41 H 1.09002 * 109.47369 * 65.00225 * 14 12 11 42 42 H 1.08999 * 109.47078 * 304.99720 * 14 12 11 43 43 H 1.08994 * 109.47125 * 59.99490 * 15 14 12 44 44 H 1.08999 * 109.46724 * 299.99726 * 15 14 12 45 45 H 0.96999 * 120.00660 * 359.97438 * 16 15 14 46 46 H 1.07999 * 119.54329 * 180.02562 * 21 20 19 47 47 H 1.08992 * 109.47410 * 240.00450 * 23 22 21 48 48 H 0.96705 * 114.00010 * 179.97438 * 24 23 22 49 49 H 1.48501 * 110.00073 * 298.67509 * 25 23 22 50 50 H 1.48495 * 110.00348 * 59.99674 * 25 23 22 51 51 H 1.07996 * 120.75096 * 180.02562 * 26 22 21 52 52 H 1.07997 * 120.46527 * 179.97438 * 27 26 22 53 53 H 1.09003 * 113.61198 * 139.97902 * 28 12 11 54 54 H 1.08997 * 113.61741 * 270.88249 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0139 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5094 0.5039 8 7 2.0679 -2.6657 2.4167 9 6 1.6739 -4.0668 2.5832 10 1 1.4208 -4.5502 1.6396 11 6 2.6473 -4.8815 3.4512 12 6 1.4101 -5.5541 4.0688 13 1 1.0845 -6.4457 3.5329 14 6 1.5226 -5.7762 5.5784 15 6 0.3032 -6.5580 6.0712 16 7 0.4107 -6.7701 7.5167 17 6 -0.5566 -7.4410 8.1732 18 8 -1.5179 -7.8695 7.5660 19 6 -0.4476 -7.6561 9.6351 20 7 0.6051 -7.1861 10.2927 21 6 0.7399 -7.3549 11.5901 22 6 -0.2195 -8.0351 12.3227 23 6 -0.0520 -8.2204 13.8089 24 8 -1.1498 -7.6113 14.4914 25 14 1.5397 -7.4233 14.3586 26 6 -1.3353 -8.5426 11.6754 27 6 -1.4515 -8.3489 10.3080 28 6 0.6283 -4.2853 3.6895 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1300 1.4426 -0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6767 1.9564 0.8899 35 1 1.6767 -1.7489 -1.2492 36 1 1.6767 -0.2074 -2.1392 37 1 3.1299 -0.7216 -1.2491 38 1 2.6281 -2.2369 3.0825 39 1 3.2136 -4.2755 4.1584 40 1 3.2757 -5.5643 2.8792 41 1 1.5653 -4.8121 6.0854 42 1 2.4288 -6.3415 5.7959 43 1 0.2605 -7.5219 5.5643 44 1 -0.6030 -5.9927 5.8537 45 1 1.1783 -6.4284 8.0014 46 1 1.6103 -6.9578 12.0912 47 1 -0.0250 -9.2848 14.0416 48 1 -1.1081 -7.6923 15.4542 49 1 2.6919 -8.0690 13.6798 50 1 1.5149 -5.9717 14.0470 51 1 -2.0971 -9.0761 12.2244 52 1 -2.3073 -8.7311 9.7716 53 1 -0.3734 -4.4868 3.3098 54 1 0.6426 -3.5163 4.4618 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13287726.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:24 Heat of formation + Delta-G solvation = -92.157844 kcal Electronic energy + Delta-G solvation = -33332.219735 eV Core-core repulsion = 28657.438218 eV Total energy + Delta-G solvation = -4674.781517 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.203 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -42.00142 -41.91400 -40.61413 -40.17305 -38.06633 -37.80254 -36.50216 -35.41537 -34.41639 -33.96813 -33.18798 -31.50811 -28.41111 -28.34070 -28.06087 -26.73552 -26.01740 -25.16881 -24.17292 -23.32672 -22.25173 -21.87505 -21.40045 -20.47210 -19.39640 -19.13584 -18.61261 -18.20111 -17.75227 -17.22856 -16.98204 -16.91282 -16.82045 -16.57607 -16.33992 -16.17352 -15.67533 -15.57377 -15.40383 -15.35516 -15.09468 -14.64549 -14.54083 -14.38440 -14.02938 -13.96152 -13.82732 -13.70581 -13.43066 -13.38830 -13.20316 -12.95956 -12.90704 -12.89503 -12.65990 -12.54575 -12.40908 -12.32705 -12.10935 -11.89182 -11.82842 -11.47827 -11.42775 -11.26490 -11.17759 -11.13563 -10.91375 -10.62904 -10.30043 -10.16085 -10.11718 -4.95084 -0.72182 -0.07855 1.15520 1.24673 1.42320 1.66287 1.70137 1.87180 1.94767 2.51166 2.77697 3.12982 3.23147 3.43337 3.45786 3.48084 3.59161 3.70427 3.71385 3.74843 3.79029 3.80991 3.84800 3.90567 4.05275 4.13214 4.23499 4.30059 4.32236 4.47882 4.49355 4.57060 4.59212 4.60018 4.72215 4.72560 4.74996 4.76838 4.81358 4.83710 4.83992 4.87616 4.91942 4.96367 5.00842 5.09826 5.16101 5.22762 5.22902 5.23839 5.27352 5.31370 5.52559 5.58168 6.13535 6.37895 6.45590 6.87340 6.93235 7.31193 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.689 5.689 9 C 0.130 3.870 10 H 0.101 0.899 11 C -0.125 4.125 12 C -0.096 4.096 13 H 0.101 0.899 14 C -0.108 4.108 15 C 0.116 3.884 16 N -0.701 5.701 17 C 0.567 3.433 18 O -0.565 6.565 19 C 0.059 3.941 20 N -0.461 5.461 21 C 0.082 3.918 22 C -0.109 4.109 23 C -0.077 4.077 24 O -0.562 6.562 25 Si 0.772 3.228 26 C -0.049 4.049 27 C -0.112 4.112 28 C -0.149 4.149 29 H 0.061 0.939 30 H 0.087 0.913 31 H 0.062 0.938 32 H 0.070 0.930 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.062 0.938 36 H 0.087 0.913 37 H 0.062 0.938 38 H 0.417 0.583 39 H 0.106 0.894 40 H 0.085 0.915 41 H 0.082 0.918 42 H 0.087 0.913 43 H 0.066 0.934 44 H 0.061 0.939 45 H 0.419 0.581 46 H 0.162 0.838 47 H 0.110 0.890 48 H 0.409 0.591 49 H -0.280 1.280 50 H -0.293 1.293 51 H 0.172 0.828 52 H 0.156 0.844 53 H 0.061 0.939 54 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.147 -0.009 8.241 9.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.395 3.605 7 O -0.487 6.487 8 N -0.348 5.348 9 C 0.026 3.974 10 H 0.119 0.881 11 C -0.163 4.163 12 C -0.116 4.116 13 H 0.119 0.881 14 C -0.145 4.145 15 C -0.007 4.007 16 N -0.352 5.352 17 C 0.352 3.648 18 O -0.443 6.443 19 C -0.079 4.079 20 N -0.172 5.172 21 C -0.078 4.078 22 C -0.111 4.111 23 C -0.187 4.187 24 O -0.373 6.373 25 Si 0.677 3.323 26 C -0.075 4.075 27 C -0.133 4.133 28 C -0.188 4.188 29 H 0.080 0.920 30 H 0.106 0.894 31 H 0.081 0.919 32 H 0.089 0.911 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.081 0.919 36 H 0.106 0.894 37 H 0.081 0.919 38 H 0.254 0.746 39 H 0.125 0.875 40 H 0.104 0.896 41 H 0.101 0.899 42 H 0.106 0.894 43 H 0.084 0.916 44 H 0.079 0.921 45 H 0.256 0.744 46 H 0.179 0.821 47 H 0.127 0.873 48 H 0.261 0.739 49 H -0.207 1.207 50 H -0.221 1.221 51 H 0.189 0.811 52 H 0.174 0.826 53 H 0.080 0.920 54 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 5.301 0.555 5.951 7.989 hybrid contribution -0.671 -0.320 0.177 0.765 sum 4.630 0.235 6.128 7.684 Atomic orbital electron populations 1.22472 0.94166 1.03607 1.03483 1.22350 0.94382 0.92647 0.81566 1.21890 1.02493 0.90816 1.04244 1.22470 1.01667 1.02205 0.97363 1.86311 1.71550 1.23365 1.47255 1.18474 0.78667 0.80785 0.82577 1.90901 1.42313 1.70973 1.44558 1.44813 1.54795 1.12347 1.22878 1.22647 0.97398 0.78490 0.98821 0.88140 1.23390 0.96378 0.98269 0.98221 1.22199 0.96827 0.97481 0.95092 0.88122 1.21683 0.96935 1.01074 0.94840 1.21541 0.99962 1.00656 0.78557 1.45851 1.24145 1.55260 1.09894 1.18021 0.82676 0.78298 0.85761 1.90790 1.33092 1.51992 1.68473 1.21184 0.92983 0.99441 0.94304 1.67430 1.21919 1.17754 1.10067 1.22677 0.99029 0.96371 0.89694 1.21048 0.95656 0.97264 0.97164 1.24765 1.01611 1.03991 0.88335 1.86429 1.45332 1.79696 1.25853 0.93974 0.72549 0.76285 0.89444 1.21816 0.96922 0.95746 0.92972 1.22380 0.99240 0.96283 0.95352 1.23634 0.98479 0.98326 0.98392 0.92019 0.89435 0.91923 0.91100 0.88299 0.91209 0.91888 0.89437 0.91863 0.74582 0.87527 0.89612 0.89935 0.89418 0.91583 0.92061 0.74398 0.82146 0.87267 0.73924 1.20691 1.22075 0.81054 0.82595 0.91971 0.88840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.84 8.37 71.98 0.60 -0.23 16 2 C 0.13 0.52 1.13 -10.79 -0.01 0.50 16 3 C -0.14 0.17 8.85 71.98 0.64 0.81 16 4 C -0.18 -0.77 8.37 71.98 0.60 -0.17 16 5 O -0.37 -2.44 9.94 -55.47 -0.55 -2.99 16 6 C 0.64 5.10 8.06 129.79 1.05 6.14 16 7 O -0.60 -8.12 11.48 19.79 0.23 -7.89 16 8 N -0.69 -0.77 5.36 -567.62 -3.04 -3.82 16 9 C 0.13 -0.07 4.24 45.52 0.19 0.12 16 10 H 0.10 0.37 7.46 -2.39 -0.02 0.35 16 11 C -0.12 0.77 7.39 31.12 0.23 1.00 16 12 C -0.10 0.49 3.65 -10.27 -0.04 0.45 16 13 H 0.10 -0.47 8.13 -2.38 -0.02 -0.49 16 14 C -0.11 0.61 5.17 30.60 0.16 0.77 16 15 C 0.12 0.06 5.67 86.38 0.49 0.55 16 16 N -0.70 -2.31 5.55 -465.66 -2.58 -4.89 16 17 C 0.57 5.32 7.81 86.88 0.68 6.00 16 18 O -0.56 -8.73 16.32 -3.76 -0.06 -8.79 16 19 C 0.06 0.45 6.75 41.91 0.28 0.73 16 20 N -0.46 -3.01 9.54 -184.91 -1.76 -4.77 16 21 C 0.08 0.34 9.84 84.82 0.83 1.17 16 22 C -0.11 -0.16 5.44 -19.69 -0.11 -0.27 16 23 C -0.08 0.40 2.83 71.24 0.20 0.60 16 24 O -0.56 2.67 12.75 -148.98 -1.90 0.77 16 25 Si 0.77 -4.78 29.82 68.60 2.05 -2.73 16 26 C -0.05 -0.07 9.76 22.45 0.22 0.15 16 27 C -0.11 -0.56 9.63 22.61 0.22 -0.34 16 28 C -0.15 0.28 7.43 31.12 0.23 0.51 16 29 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 30 H 0.09 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.06 0.64 5.88 -2.39 -0.01 0.63 16 32 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 34 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 35 H 0.06 0.61 5.88 -2.39 -0.01 0.60 16 36 H 0.09 0.06 8.14 -2.39 -0.02 0.04 16 37 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 38 H 0.42 -1.57 8.84 -92.71 -0.82 -2.39 16 39 H 0.11 -0.96 8.08 -2.39 -0.02 -0.98 16 40 H 0.09 -0.55 8.14 -2.38 -0.02 -0.57 16 41 H 0.08 -0.56 7.84 -2.39 -0.02 -0.58 16 42 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 43 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 44 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 45 H 0.42 0.04 7.80 -92.71 -0.72 -0.68 16 46 H 0.16 0.27 4.89 -2.91 -0.01 0.25 16 47 H 0.11 -1.10 7.96 -2.39 -0.02 -1.12 16 48 H 0.41 -6.18 8.74 -74.05 -0.65 -6.83 16 49 H -0.28 0.34 7.11 99.48 0.71 1.05 16 50 H -0.29 -0.47 7.11 99.48 0.71 0.23 16 51 H 0.17 -0.62 8.06 -2.91 -0.02 -0.64 16 52 H 0.16 0.63 7.64 -2.91 -0.02 0.61 16 53 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 54 H 0.09 -0.26 7.90 -2.39 -0.02 -0.28 16 Total: 0.00 -25.59 438.16 -2.37 -27.96 By element: Atomic # 1 Polarization: -10.13 SS G_CDS: -1.21 Total: -11.34 kcal Atomic # 6 Polarization: 12.03 SS G_CDS: 6.47 Total: 18.50 kcal Atomic # 7 Polarization: -6.10 SS G_CDS: -7.39 Total: -13.48 kcal Atomic # 8 Polarization: -16.62 SS G_CDS: -2.28 Total: -18.91 kcal Atomic # 14 Polarization: -4.78 SS G_CDS: 2.05 Total: -2.73 kcal Total: -25.59 -2.37 -27.96 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13287726.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.194 kcal (2) G-P(sol) polarization free energy of solvation -25.593 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.964 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.158 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds