Wall clock time and date at job start Thu Mar 4 2021 12:27:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46510 * 1 3 3 C 1.34658 * 124.84911 * 2 1 4 4 C 1.36763 * 108.39483 * 180.13931 * 3 2 1 5 5 C 1.47265 * 126.93888 * 179.87475 * 4 3 2 6 6 O 1.21635 * 119.99773 * 179.68313 * 5 4 3 7 7 N 1.34772 * 120.00594 * 359.68257 * 5 4 3 8 8 C 1.46501 * 120.00560 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.47146 * 179.97438 * 8 7 5 10 10 C 1.52999 * 109.46901 * 179.97438 * 9 8 7 11 11 H 1.09005 * 112.85066 * 43.80792 * 10 9 8 12 12 C 1.53787 * 113.61615 * 175.00000 * 10 9 8 13 13 C 1.53781 * 87.07987 * 139.98149 * 12 10 9 14 14 H 1.09002 * 113.61228 * 89.11929 * 13 12 10 15 15 N 1.46500 * 113.61339 * 219.93875 * 13 12 10 16 16 C 1.34781 * 119.99985 * 203.47543 * 15 13 12 17 17 O 1.21508 * 119.99974 * 359.97438 * 16 15 13 18 18 O 1.34630 * 120.00040 * 179.97438 * 16 15 13 19 19 C 1.45202 * 117.00121 * 179.97438 * 18 16 15 20 20 C 1.53000 * 109.46944 * 59.99985 * 19 18 16 21 21 C 1.53000 * 109.47240 * 179.97438 * 19 18 16 22 22 C 1.53000 * 109.46961 * 300.00255 * 19 18 16 23 23 C 1.53779 * 113.61451 * 272.49954 * 10 9 8 24 24 C 1.46684 * 106.11486 * 359.60915 * 4 3 2 25 25 C 1.34482 * 106.33305 * 0.23935 * 24 4 3 26 26 C 1.50695 * 125.56874 * 180.02562 * 25 24 4 27 27 O 1.42903 * 109.47303 * 149.98079 * 26 25 24 28 28 Si 1.86296 * 109.47401 * 29.97826 * 26 25 24 29 29 H 1.09002 * 109.46796 * 270.30740 * 1 2 3 30 30 H 1.08995 * 109.46993 * 30.30737 * 1 2 3 31 31 H 1.08997 * 109.46652 * 150.30932 * 1 2 3 32 32 H 1.08005 * 125.80103 * 0.02909 * 3 2 1 33 33 H 0.97000 * 119.99619 * 359.97438 * 7 5 4 34 34 H 1.09003 * 109.47080 * 59.99961 * 8 7 5 35 35 H 1.08998 * 109.46682 * 300.00109 * 8 7 5 36 36 H 1.09003 * 109.46945 * 60.00144 * 9 8 7 37 37 H 1.08995 * 109.47142 * 299.99862 * 9 8 7 38 38 H 1.09005 * 113.61051 * 25.43553 * 12 10 9 39 39 H 1.08996 * 113.69311 * 254.54182 * 12 10 9 40 40 H 0.96998 * 120.00149 * 23.46564 * 15 13 12 41 41 H 1.09001 * 109.47216 * 60.00210 * 20 19 18 42 42 H 1.09001 * 109.47566 * 179.97438 * 20 19 18 43 43 H 1.08997 * 109.47119 * 300.00057 * 20 19 18 44 44 H 1.08997 * 109.47133 * 60.00345 * 21 19 18 45 45 H 1.09001 * 109.46996 * 180.02562 * 21 19 18 46 46 H 1.09001 * 109.47203 * 299.99963 * 21 19 18 47 47 H 1.08997 * 109.47379 * 59.99774 * 22 19 18 48 48 H 1.09003 * 109.46760 * 180.02562 * 22 19 18 49 49 H 1.08997 * 109.47243 * 299.99551 * 22 19 18 50 50 H 1.09003 * 113.61775 * 105.47647 * 23 10 9 51 51 H 1.08996 * 113.61960 * 334.56374 * 23 10 9 52 52 H 1.08007 * 126.83032 * 180.22102 * 24 4 3 53 53 H 1.09000 * 109.47247 * 269.97693 * 26 25 24 54 54 H 0.96701 * 114.00205 * 179.97438 * 27 26 25 55 55 H 1.48502 * 110.00226 * 298.67931 * 28 26 25 56 56 H 1.48498 * 109.99822 * 60.00069 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2346 1.1051 0.0000 4 6 3.5462 0.7177 -0.0032 5 6 4.7283 1.5959 -0.0069 6 8 5.8447 1.1129 -0.0036 7 7 4.5734 2.9346 -0.0139 8 6 5.7494 3.8082 -0.0181 9 6 5.2986 5.2703 -0.0265 10 6 6.5269 6.1826 -0.0303 11 1 7.2996 5.8493 -0.7231 12 6 6.1845 7.6761 -0.1616 13 6 7.2947 7.9405 0.8692 14 1 8.2783 8.0881 0.4233 15 7 6.9525 8.9757 1.8478 16 6 7.9300 9.6462 2.4892 17 8 9.0951 9.3917 2.2562 18 8 7.6156 10.5978 3.3881 19 6 8.7195 11.2786 4.0410 20 6 9.5825 11.9767 2.9879 21 6 8.1703 12.3179 5.0203 22 6 9.5691 10.2588 4.8020 23 6 7.0567 6.5082 1.3761 24 6 3.5375 -0.7491 0.0044 25 6 2.2447 -1.1196 0.0060 26 6 1.7399 -2.5395 0.0138 27 8 0.4809 -2.5937 0.6877 28 14 2.9650 -3.6294 0.8980 29 1 -0.3633 0.0055 1.0277 30 1 -0.3633 0.8872 -0.5186 31 1 -0.3632 -0.8927 -0.5090 32 1 1.8767 2.1241 0.0004 33 1 3.6831 3.3198 -0.0168 34 1 6.3477 3.6078 -0.9070 35 1 6.3472 3.6170 0.8730 36 1 4.7001 5.4710 0.8621 37 1 4.7011 5.4612 -0.9178 38 1 5.1866 7.9285 0.1971 39 1 6.3969 8.0891 -1.1476 40 1 6.0225 9.1786 2.0339 41 1 8.9772 12.7032 2.4457 42 1 10.4110 12.4882 3.4780 43 1 9.9737 11.2366 2.2900 44 1 7.5554 11.8209 5.7705 45 1 8.9991 12.8292 5.5100 46 1 7.5654 13.0444 4.4777 47 1 9.9603 9.5187 4.1040 48 1 10.3976 10.7699 5.2924 49 1 8.9544 9.7614 5.5522 50 1 7.9739 5.9773 1.6310 51 1 6.2973 6.4414 2.1552 52 1 4.3982 -1.4016 0.0078 53 1 1.6181 -2.8875 -1.0120 54 1 0.0954 -3.4796 0.7304 55 1 4.2695 -3.6068 0.1887 56 1 3.1397 -3.1655 2.2978 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13287730.mol2 56 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:30 Heat of formation + Delta-G solvation = -84.179590 kcal Electronic energy + Delta-G solvation = -34152.497789 eV Core-core repulsion = 29450.750756 eV Total energy + Delta-G solvation = -4701.747033 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.219 amu Computer time = 1.94 seconds Orbital eigenvalues (eV) -42.54079 -41.91974 -40.62421 -40.11539 -38.04675 -37.67145 -36.33539 -35.39254 -34.31779 -33.84739 -32.19636 -30.95923 -28.41130 -28.33643 -27.76128 -26.74091 -26.50695 -25.69860 -24.14941 -23.22147 -22.20999 -21.43138 -21.15164 -20.56924 -20.20426 -19.12913 -18.66982 -18.30198 -17.76573 -17.22481 -17.17858 -16.87534 -16.77284 -16.55216 -16.39992 -16.08859 -15.64205 -15.54425 -15.43843 -15.38588 -14.98793 -14.93695 -14.59112 -14.51549 -13.85713 -13.77014 -13.70537 -13.41169 -13.39412 -13.33308 -13.24298 -13.22403 -13.16534 -12.95321 -12.90328 -12.85805 -12.76263 -12.62619 -12.39546 -12.30261 -12.06077 -11.86480 -11.66456 -11.43155 -11.24588 -11.14670 -11.08344 -10.63472 -10.23350 -10.15151 -9.72096 -9.29271 -5.05605 0.61875 0.91379 1.16056 1.36648 1.62507 1.70955 1.88929 2.04905 2.20713 2.41753 3.13811 3.19940 3.47953 3.49213 3.67142 3.70723 3.75249 3.75995 3.81184 3.83215 3.88021 3.90785 4.08045 4.23814 4.30865 4.32018 4.35282 4.39564 4.50348 4.52439 4.57089 4.61984 4.64049 4.68389 4.72347 4.75253 4.76527 4.79685 4.82617 4.83979 4.86643 4.88175 4.95183 5.00050 5.03197 5.11798 5.20606 5.22981 5.25551 5.32170 5.39630 5.47924 5.53620 5.59389 5.85369 6.14902 6.39171 6.56179 6.83081 7.24175 7.32302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.421 5.421 3 C 0.078 3.922 4 C -0.264 4.264 5 C 0.584 3.416 6 O -0.603 6.603 7 N -0.712 5.712 8 C 0.119 3.881 9 C -0.104 4.104 10 C -0.099 4.099 11 H 0.095 0.905 12 C -0.121 4.121 13 C 0.129 3.871 14 H 0.097 0.903 15 N -0.688 5.688 16 C 0.641 3.359 17 O -0.597 6.597 18 O -0.370 6.370 19 C 0.127 3.873 20 C -0.180 4.180 21 C -0.137 4.137 22 C -0.180 4.180 23 C -0.151 4.151 24 C -0.190 4.190 25 C 0.022 3.978 26 C -0.039 4.039 27 O -0.557 6.557 28 Si 0.798 3.202 29 H 0.081 0.919 30 H 0.108 0.892 31 H 0.101 0.899 32 H 0.219 0.781 33 H 0.416 0.584 34 H 0.054 0.946 35 H 0.049 0.951 36 H 0.087 0.913 37 H 0.093 0.907 38 H 0.111 0.889 39 H 0.085 0.915 40 H 0.418 0.582 41 H 0.063 0.937 42 H 0.086 0.914 43 H 0.062 0.938 44 H 0.069 0.931 45 H 0.098 0.902 46 H 0.071 0.929 47 H 0.061 0.939 48 H 0.087 0.913 49 H 0.061 0.939 50 H 0.056 0.944 51 H 0.095 0.905 52 H 0.123 0.877 53 H 0.106 0.894 54 H 0.411 0.589 55 H -0.303 1.303 56 H -0.313 1.313 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.064 1.035 -1.328 13.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 N -0.094 5.094 3 C -0.060 4.060 4 C -0.274 4.274 5 C 0.374 3.626 6 O -0.486 6.486 7 N -0.364 5.364 8 C -0.004 4.004 9 C -0.141 4.141 10 C -0.118 4.118 11 H 0.113 0.887 12 C -0.159 4.159 13 C 0.026 3.974 14 H 0.115 0.885 15 N -0.347 5.347 16 C 0.394 3.606 17 O -0.488 6.488 18 O -0.284 6.284 19 C 0.091 3.909 20 C -0.237 4.237 21 C -0.194 4.194 22 C -0.238 4.238 23 C -0.189 4.189 24 C -0.214 4.214 25 C -0.088 4.088 26 C -0.149 4.149 27 O -0.368 6.368 28 Si 0.705 3.295 29 H 0.099 0.901 30 H 0.126 0.874 31 H 0.119 0.881 32 H 0.236 0.764 33 H 0.253 0.747 34 H 0.072 0.928 35 H 0.067 0.933 36 H 0.106 0.894 37 H 0.111 0.889 38 H 0.129 0.871 39 H 0.104 0.896 40 H 0.255 0.745 41 H 0.082 0.918 42 H 0.105 0.895 43 H 0.081 0.919 44 H 0.088 0.912 45 H 0.117 0.883 46 H 0.090 0.910 47 H 0.080 0.920 48 H 0.105 0.895 49 H 0.080 0.920 50 H 0.075 0.925 51 H 0.114 0.886 52 H 0.141 0.859 53 H 0.124 0.876 54 H 0.263 0.737 55 H -0.232 1.232 56 H -0.242 1.242 Dipole moment (debyes) X Y Z Total from point charges -11.222 1.216 -0.910 11.324 hybrid contribution 0.277 0.502 0.010 0.574 sum -10.945 1.718 -0.901 11.116 Atomic orbital electron populations 1.22444 0.73542 1.06161 1.04761 1.43809 1.08635 1.04225 1.52764 1.22504 0.88545 0.93562 1.01353 1.20306 0.92895 0.93196 1.20989 1.17692 0.87566 0.82582 0.74767 1.90750 1.28049 1.76467 1.53286 1.45637 1.11054 1.04529 1.75168 1.21382 0.87622 0.90225 1.01179 1.21666 0.97626 0.90233 1.04599 1.22204 0.98082 0.94711 0.96843 0.88687 1.23373 0.98883 0.94604 0.99011 1.22643 1.00521 0.85114 0.89151 0.88473 1.44798 1.08577 1.38768 1.42596 1.18487 0.84920 0.78639 0.78513 1.90903 1.19302 1.70039 1.68599 1.86307 1.40858 1.48701 1.52543 1.22344 0.84448 0.91867 0.92261 1.22473 1.00654 1.01032 0.99561 1.21889 1.02931 0.96920 0.97679 1.22472 1.00755 0.99943 1.00582 1.23641 1.01776 0.95464 0.98065 1.21633 0.95247 0.94439 1.10130 1.20137 0.89710 0.89179 1.09808 1.24253 0.94386 0.93448 1.02839 1.86367 1.33665 1.37670 1.79079 0.94985 0.75922 0.83819 0.74724 0.90082 0.87397 0.88078 0.76441 0.74699 0.92762 0.93278 0.89436 0.88855 0.87094 0.89604 0.74483 0.91806 0.89477 0.91936 0.91179 0.88339 0.91042 0.91993 0.89461 0.92005 0.92533 0.88648 0.85936 0.87641 0.73657 1.23160 1.24166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.50 9.81 127.77 1.25 0.75 16 2 N -0.42 -0.22 3.09 -533.24 -1.65 -1.86 16 3 C 0.08 -0.02 10.83 83.91 0.91 0.89 16 4 C -0.26 -2.40 6.29 -19.04 -0.12 -2.52 16 5 C 0.58 7.02 7.81 86.62 0.68 7.69 16 6 O -0.60 -13.70 16.97 -4.14 -0.07 -13.77 16 7 N -0.71 -1.25 5.55 -466.52 -2.59 -3.84 16 8 C 0.12 0.15 5.66 86.38 0.49 0.64 16 9 C -0.10 0.73 5.17 30.59 0.16 0.88 16 10 C -0.10 0.51 3.65 -10.27 -0.04 0.47 16 11 H 0.09 -0.35 8.13 -2.38 -0.02 -0.37 16 12 C -0.12 0.84 7.39 31.12 0.23 1.07 16 13 C 0.13 -0.08 4.22 45.52 0.19 0.11 16 14 H 0.10 0.39 7.50 -2.39 -0.02 0.37 16 15 N -0.69 -0.52 5.37 -567.60 -3.05 -3.57 16 16 C 0.64 5.04 8.06 129.79 1.05 6.08 16 17 O -0.60 -8.28 11.50 19.82 0.23 -8.05 16 18 O -0.37 -2.35 9.94 -55.39 -0.55 -2.90 16 19 C 0.13 0.51 1.13 -10.79 -0.01 0.50 16 20 C -0.18 -0.77 8.37 71.98 0.60 -0.17 16 21 C -0.14 0.20 8.85 71.98 0.64 0.83 16 22 C -0.18 -0.86 8.37 71.98 0.60 -0.26 16 23 C -0.15 0.22 7.43 31.12 0.23 0.45 16 24 C -0.19 -2.29 9.49 23.62 0.22 -2.06 16 25 C 0.02 0.12 6.17 40.98 0.25 0.37 16 26 C -0.04 0.08 2.86 71.23 0.20 0.28 16 27 O -0.56 3.34 10.29 -148.98 -1.53 1.81 16 28 Si 0.80 0.22 31.23 68.60 2.14 2.36 16 29 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 30 H 0.11 -1.35 8.13 -2.39 -0.02 -1.37 16 31 H 0.10 -0.76 6.73 -2.39 -0.02 -0.78 16 32 H 0.22 -2.36 7.45 -2.91 -0.02 -2.38 16 33 H 0.42 -2.76 7.42 -92.71 -0.69 -3.45 16 34 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 35 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 36 H 0.09 -0.81 7.84 -2.39 -0.02 -0.83 16 37 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 38 H 0.11 -1.19 8.07 -2.38 -0.02 -1.21 16 39 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 40 H 0.42 -1.91 8.82 -92.71 -0.82 -2.73 16 41 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 42 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 43 H 0.06 0.62 5.88 -2.39 -0.01 0.60 16 44 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 45 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 46 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 47 H 0.06 0.65 5.88 -2.39 -0.01 0.64 16 48 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 49 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 50 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 51 H 0.10 -0.28 7.89 -2.39 -0.02 -0.30 16 52 H 0.12 1.95 6.74 -2.91 -0.02 1.93 16 53 H 0.11 -0.69 7.96 -2.39 -0.02 -0.71 16 54 H 0.41 -6.67 8.74 -74.06 -0.65 -7.32 16 55 H -0.30 -2.61 6.89 99.48 0.69 -1.93 16 56 H -0.31 -3.21 7.11 99.48 0.71 -2.50 16 Total: 0.00 -37.11 448.52 -0.76 -37.87 By element: Atomic # 1 Polarization: -22.86 SS G_CDS: -1.23 Total: -24.09 kcal Atomic # 6 Polarization: 8.49 SS G_CDS: 7.54 Total: 16.03 kcal Atomic # 7 Polarization: -1.99 SS G_CDS: -7.28 Total: -9.27 kcal Atomic # 8 Polarization: -20.98 SS G_CDS: -1.93 Total: -22.91 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: 2.14 Total: 2.36 kcal Total: -37.11 -0.76 -37.87 kcal The number of atoms in the molecule is 56 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13287730.mol2 56 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.314 kcal (2) G-P(sol) polarization free energy of solvation -37.109 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.866 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.94 seconds