Wall clock time and date at job start Thu Mar 4 2021 12:27:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53001 * 109.47607 * 2 1 4 4 C 1.52995 * 109.47356 * 239.99938 * 2 1 3 5 5 O 1.45202 * 109.47057 * 120.00126 * 2 1 3 6 6 C 1.34629 * 117.00126 * 60.00105 * 5 2 1 7 7 O 1.21515 * 120.00031 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00195 * 180.02562 * 6 5 2 9 9 C 1.46499 * 120.00118 * 179.97438 * 8 6 5 10 10 H 1.09000 * 112.85206 * 23.79873 * 9 8 6 11 11 C 1.53780 * 113.61673 * 154.99752 * 9 8 6 12 12 C 1.53780 * 87.08488 * 140.06112 * 11 9 8 13 13 H 1.09003 * 113.61137 * 89.20025 * 12 11 9 14 14 C 1.52997 * 113.61900 * 220.01941 * 12 11 9 15 15 C 1.53000 * 109.47060 * 185.00250 * 14 12 11 16 16 N 1.46499 * 109.46840 * 180.02562 * 15 14 12 17 17 C 1.34779 * 119.99872 * 179.97438 * 16 15 14 18 18 O 1.21553 * 119.99965 * 359.97438 * 17 16 15 19 19 C 1.47846 * 120.00003 * 179.97438 * 17 16 15 20 20 C 1.39518 * 120.55692 * 359.72283 * 19 17 16 21 21 N 1.31698 * 120.56555 * 179.72583 * 20 19 17 22 22 C 1.31929 * 121.87650 * 0.53883 * 21 20 19 23 23 C 1.38346 * 121.07971 * 359.74704 * 22 21 20 24 24 C 1.50707 * 120.34782 * 179.97438 * 23 22 21 25 25 O 1.42897 * 109.46998 * 120.02172 * 24 23 22 26 26 Si 1.86298 * 109.46996 * 0.02700 * 24 23 22 27 27 C 1.38353 * 119.30770 * 359.97438 * 23 22 21 28 28 C 1.53787 * 87.08169 * 334.56869 * 12 11 9 29 29 H 1.09001 * 109.47432 * 300.00529 * 1 2 3 30 30 H 1.09008 * 109.47021 * 59.99817 * 1 2 3 31 31 H 1.08993 * 109.47223 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47819 * 179.97438 * 3 2 1 33 33 H 1.09001 * 109.46918 * 300.00506 * 3 2 1 34 34 H 1.09007 * 109.46751 * 59.99394 * 3 2 1 35 35 H 1.09001 * 109.47386 * 300.00255 * 4 2 1 36 36 H 1.09000 * 109.47485 * 60.00183 * 4 2 1 37 37 H 1.09006 * 109.47548 * 180.02562 * 4 2 1 38 38 H 0.97006 * 119.99965 * 359.97438 * 8 6 5 39 39 H 1.09004 * 113.61321 * 25.51394 * 11 9 8 40 40 H 1.09001 * 113.69385 * 254.62453 * 11 9 8 41 41 H 1.09002 * 109.47153 * 64.99931 * 14 12 11 42 42 H 1.09001 * 109.46832 * 305.00122 * 14 12 11 43 43 H 1.09001 * 109.47194 * 299.99650 * 15 14 12 44 44 H 1.08992 * 109.47399 * 59.99823 * 15 14 12 45 45 H 0.97005 * 120.00448 * 359.97438 * 16 15 14 46 46 H 1.08003 * 119.71833 * 359.97438 * 20 19 17 47 47 H 1.08004 * 119.45893 * 179.72387 * 22 21 20 48 48 H 1.08996 * 109.47224 * 240.02156 * 24 23 22 49 49 H 0.96703 * 114.00626 * 300.00357 * 25 24 23 50 50 H 1.48496 * 110.00213 * 58.67784 * 26 24 23 51 51 H 1.48501 * 109.99978 * 180.02562 * 26 24 23 52 52 H 1.07997 * 120.85901 * 180.02562 * 27 23 22 53 53 H 1.08998 * 113.61477 * 139.97815 * 28 12 11 54 54 H 1.08992 * 113.61461 * 270.88344 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0671 -2.6654 2.4171 9 6 1.6731 -4.0665 2.5836 10 1 1.4207 -4.5503 1.6400 11 6 2.6459 -4.8811 3.4525 12 6 1.4083 -5.5552 4.0678 13 1 1.0844 -6.4467 3.5308 14 6 1.5187 -5.7783 5.5774 15 6 0.2992 -6.5616 6.0677 16 7 0.4047 -6.7747 7.5133 17 6 -0.5635 -7.4460 8.1679 18 8 -1.5243 -7.8742 7.5589 19 6 -0.4568 -7.6615 9.6266 20 6 0.6438 -7.1801 10.3362 21 7 0.7364 -7.3673 11.6365 22 6 -0.1894 -8.0185 12.3143 23 6 -1.3082 -8.5319 11.6829 24 6 -2.3554 -9.2736 12.4733 25 8 -3.6104 -8.6017 12.3492 26 14 -1.8557 -9.3293 14.2671 27 6 -1.4558 -8.3572 10.3184 28 6 0.6259 -4.2868 3.6882 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1300 1.4425 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6766 -1.7489 -1.2492 36 1 1.6767 -0.2074 -2.1392 37 1 3.1300 -0.7216 -1.2490 38 1 2.6267 -2.2365 3.0834 39 1 3.2106 -4.2751 4.1611 40 1 3.2765 -5.5632 2.8822 41 1 1.5597 -4.8146 6.0851 42 1 2.4251 -6.3430 5.7958 43 1 -0.6072 -5.9969 5.8493 44 1 0.2582 -7.5252 5.5601 45 1 1.1713 -6.4326 7.9994 46 1 1.4246 -6.6458 9.8153 47 1 -0.0716 -8.1533 13.3794 48 1 -2.4478 -10.2897 12.0900 49 1 -3.6022 -7.6900 12.6715 50 1 -1.6954 -7.9498 14.7929 51 1 -2.8799 -10.0587 15.0572 52 1 -2.3195 -8.7471 9.8003 53 1 -0.3750 -4.4889 3.3069 54 1 0.6384 -3.5184 4.4610 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13287814.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:49 Heat of formation + Delta-G solvation = -93.758688 kcal Electronic energy + Delta-G solvation = -33395.335129 eV Core-core repulsion = 28720.484195 eV Total energy + Delta-G solvation = -4674.850935 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.203 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -41.93753 -41.87472 -40.57174 -40.13268 -38.09276 -38.03663 -36.45938 -35.39761 -34.34944 -33.78346 -33.33177 -31.25906 -28.40048 -28.32784 -27.31628 -26.85094 -26.60275 -25.12124 -23.89248 -23.62183 -22.22216 -21.63651 -21.34911 -20.41693 -19.29544 -19.11318 -18.21897 -17.97017 -17.77262 -17.67485 -17.20378 -16.83015 -16.74519 -16.53977 -16.35008 -16.13493 -15.88086 -15.58923 -15.45772 -15.21767 -14.89898 -14.55131 -14.51962 -14.38803 -14.24083 -13.80476 -13.68466 -13.44494 -13.38151 -13.37188 -13.18058 -12.94323 -12.89245 -12.84430 -12.81196 -12.62574 -12.38306 -12.29642 -12.12206 -11.84296 -11.72765 -11.42414 -11.33566 -11.21987 -11.12157 -11.10587 -10.72400 -10.57705 -10.40578 -10.14014 -10.12648 -4.94872 -0.57786 -0.03762 1.17726 1.21978 1.58103 1.64824 1.72387 1.92291 2.00216 2.62470 3.10679 3.15531 3.31316 3.39822 3.49665 3.51747 3.64860 3.71513 3.71708 3.74647 3.76406 3.83893 3.85974 3.91785 4.07949 4.12355 4.27066 4.32342 4.35764 4.51375 4.53444 4.58000 4.63549 4.67274 4.73317 4.76912 4.79269 4.82438 4.83707 4.84909 4.88265 4.91925 4.97485 5.00958 5.05111 5.12736 5.21521 5.23907 5.27076 5.29205 5.33494 5.36039 5.55725 5.61379 6.36092 6.39834 6.40683 6.64856 7.03646 7.33747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.597 6.597 8 N -0.688 5.688 9 C 0.127 3.873 10 H 0.097 0.903 11 C -0.123 4.123 12 C -0.097 4.097 13 H 0.097 0.903 14 C -0.107 4.107 15 C 0.118 3.882 16 N -0.707 5.707 17 C 0.561 3.439 18 O -0.579 6.579 19 C -0.198 4.198 20 C 0.148 3.852 21 N -0.493 5.493 22 C 0.130 3.870 23 C -0.174 4.174 24 C -0.084 4.084 25 O -0.548 6.548 26 Si 0.776 3.224 27 C -0.004 4.004 28 C -0.150 4.150 29 H 0.061 0.939 30 H 0.086 0.914 31 H 0.062 0.938 32 H 0.070 0.930 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.062 0.938 36 H 0.086 0.914 37 H 0.063 0.937 38 H 0.418 0.582 39 H 0.110 0.890 40 H 0.084 0.916 41 H 0.088 0.912 42 H 0.093 0.907 43 H 0.056 0.944 44 H 0.061 0.939 45 H 0.417 0.583 46 H 0.195 0.805 47 H 0.184 0.816 48 H 0.129 0.871 49 H 0.387 0.613 50 H -0.272 1.272 51 H -0.298 1.298 52 H 0.134 0.866 53 H 0.058 0.942 54 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.230 2.330 3.653 9.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.489 6.489 8 N -0.347 5.347 9 C 0.024 3.976 10 H 0.115 0.885 11 C -0.161 4.161 12 C -0.117 4.117 13 H 0.115 0.885 14 C -0.145 4.145 15 C -0.006 4.006 16 N -0.360 5.360 17 C 0.348 3.652 18 O -0.459 6.459 19 C -0.203 4.203 20 C -0.010 4.010 21 N -0.200 5.200 22 C -0.026 4.026 23 C -0.176 4.176 24 C -0.192 4.192 25 O -0.356 6.356 26 Si 0.679 3.321 27 C -0.030 4.030 28 C -0.188 4.188 29 H 0.080 0.920 30 H 0.105 0.895 31 H 0.081 0.919 32 H 0.089 0.911 33 H 0.116 0.884 34 H 0.088 0.912 35 H 0.081 0.919 36 H 0.105 0.895 37 H 0.082 0.918 38 H 0.255 0.745 39 H 0.128 0.872 40 H 0.102 0.898 41 H 0.106 0.894 42 H 0.112 0.888 43 H 0.074 0.926 44 H 0.079 0.921 45 H 0.256 0.744 46 H 0.211 0.789 47 H 0.201 0.799 48 H 0.147 0.853 49 H 0.237 0.763 50 H -0.198 1.198 51 H -0.226 1.226 52 H 0.152 0.848 53 H 0.077 0.923 54 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 7.585 1.857 3.716 8.648 hybrid contribution -1.569 0.727 -0.735 1.879 sum 6.016 2.585 2.981 7.194 Atomic orbital electron populations 1.22472 0.94209 1.03595 1.03475 1.22331 0.94335 0.92634 0.81571 1.21892 1.02509 0.90826 1.04235 1.22475 1.01686 1.02201 0.97382 1.86308 1.71538 1.23384 1.47208 1.18494 0.78677 0.80777 0.82628 1.90903 1.42344 1.70981 1.44628 1.44807 1.54819 1.12344 1.22770 1.22668 0.97637 0.78483 0.98825 0.88486 1.23389 0.96332 0.98188 0.98214 1.22197 0.96639 0.97217 0.95645 0.88521 1.21696 0.97014 1.01356 0.94434 1.21459 0.99826 1.00384 0.78901 1.45790 1.24158 1.56177 1.09839 1.18255 0.82414 0.77813 0.86762 1.90806 1.33619 1.52010 1.69500 1.21014 0.99258 1.05768 0.94241 1.23480 0.94835 0.92924 0.89766 1.67826 1.28756 1.14657 1.08808 1.23227 0.88145 0.90096 1.01121 1.21361 0.98958 1.02626 0.94666 1.25310 0.83637 0.98496 1.11782 1.86614 1.31548 1.31670 1.85765 0.94086 0.86408 0.81094 0.70476 1.21640 0.96671 0.91136 0.93561 1.23641 0.98268 0.98515 0.98425 0.91975 0.89507 0.91933 0.91069 0.88368 0.91175 0.91895 0.89505 0.91832 0.74499 0.87195 0.89771 0.89366 0.88828 0.92591 0.92104 0.74428 0.78867 0.79940 0.85325 0.76310 1.19837 1.22628 0.84769 0.92345 0.88567 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 2 C 0.13 0.41 1.13 -10.80 -0.01 0.40 16 3 C -0.14 0.28 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.65 8.37 71.98 0.60 -0.05 16 5 O -0.37 -2.03 9.94 -55.39 -0.55 -2.58 16 6 C 0.64 4.34 8.06 129.79 1.05 5.39 16 7 O -0.60 -7.59 11.48 19.80 0.23 -7.37 16 8 N -0.69 0.33 5.36 -567.61 -3.04 -2.71 16 9 C 0.13 -0.28 4.24 45.52 0.19 -0.09 16 10 H 0.10 0.25 7.46 -2.39 -0.02 0.23 16 11 C -0.12 1.06 7.39 31.12 0.23 1.29 16 12 C -0.10 0.76 3.65 -10.27 -0.04 0.72 16 13 H 0.10 -0.63 8.13 -2.39 -0.02 -0.65 16 14 C -0.11 1.10 5.17 30.59 0.16 1.26 16 15 C 0.12 -0.44 5.66 86.38 0.49 0.05 16 16 N -0.71 2.85 5.51 -465.98 -2.57 0.29 16 17 C 0.56 2.21 7.78 86.79 0.68 2.89 16 18 O -0.58 -7.84 16.42 -3.88 -0.06 -7.91 16 19 C -0.20 -0.21 5.89 -19.99 -0.12 -0.33 16 20 C 0.15 -0.50 10.71 85.02 0.91 0.41 16 21 N -0.49 0.40 10.35 -194.75 -2.01 -1.61 16 22 C 0.13 -0.33 9.84 84.70 0.83 0.50 16 23 C -0.17 0.19 5.39 -19.81 -0.11 0.08 16 24 C -0.08 0.18 2.83 71.24 0.20 0.38 16 25 O -0.55 -1.03 12.78 -148.98 -1.90 -2.93 16 26 Si 0.78 -3.79 29.82 68.60 2.05 -1.74 16 27 C 0.00 -0.01 9.31 22.73 0.21 0.20 16 28 C -0.15 0.59 7.43 31.13 0.23 0.82 16 29 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 30 H 0.09 0.04 8.14 -2.38 -0.02 0.02 16 31 H 0.06 0.59 5.88 -2.39 -0.01 0.58 16 32 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 33 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 34 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 35 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 36 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 37 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 38 H 0.42 -2.38 8.84 -92.70 -0.82 -3.19 16 39 H 0.11 -1.32 8.08 -2.38 -0.02 -1.34 16 40 H 0.08 -0.71 8.14 -2.39 -0.02 -0.73 16 41 H 0.09 -1.09 7.84 -2.39 -0.02 -1.11 16 42 H 0.09 -1.20 8.14 -2.39 -0.02 -1.22 16 43 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 44 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 45 H 0.42 -4.72 6.54 -92.70 -0.61 -5.33 16 46 H 0.19 -2.21 6.42 -2.91 -0.02 -2.23 16 47 H 0.18 -1.39 4.88 -2.91 -0.01 -1.40 16 48 H 0.13 -0.44 7.96 -2.39 -0.02 -0.45 16 49 H 0.39 -1.57 8.70 -74.06 -0.64 -2.22 16 50 H -0.27 0.53 7.11 99.48 0.71 1.24 16 51 H -0.30 -0.98 7.11 99.48 0.71 -0.27 16 52 H 0.13 0.82 7.74 -2.91 -0.02 0.79 16 53 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 54 H 0.10 -0.53 7.90 -2.39 -0.02 -0.54 16 Total: 0.00 -27.58 435.90 -2.21 -29.79 By element: Atomic # 1 Polarization: -16.87 SS G_CDS: -1.09 Total: -17.96 kcal Atomic # 6 Polarization: 7.99 SS G_CDS: 6.75 Total: 14.74 kcal Atomic # 7 Polarization: 3.59 SS G_CDS: -7.63 Total: -4.04 kcal Atomic # 8 Polarization: -18.50 SS G_CDS: -2.29 Total: -20.79 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.05 Total: -1.74 kcal Total: -27.58 -2.21 -29.79 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13287814.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.971 kcal (2) G-P(sol) polarization free energy of solvation -27.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.788 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.759 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds