Wall clock time and date at job start Thu Mar 4 2021 12:27:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36422 * 125.79802 * 2 1 4 4 C 1.47375 * 127.19279 * 0.02562 * 3 2 1 5 5 O 1.21614 * 120.00399 * 0.14788 * 4 3 2 6 6 N 1.34781 * 119.99846 * 180.15399 * 4 3 2 7 7 C 1.46498 * 119.99839 * 179.97438 * 6 4 3 8 8 C 1.52999 * 109.46845 * 179.97438 * 7 6 4 9 9 C 1.53010 * 109.46997 * 179.97438 * 8 7 6 10 10 H 1.08996 * 112.85013 * 316.20065 * 9 8 7 11 11 C 1.53781 * 113.61019 * 87.50546 * 9 8 7 12 12 C 1.53779 * 87.07993 * 139.98375 * 11 9 8 13 13 H 1.09000 * 113.61709 * 89.11061 * 12 11 9 14 14 N 1.46501 * 113.61248 * 220.01834 * 12 11 9 15 15 C 1.34777 * 119.99834 * 252.49155 * 14 12 11 16 16 O 1.21513 * 120.00206 * 0.02562 * 15 14 12 17 17 O 1.34644 * 119.99977 * 180.02562 * 15 14 12 18 18 C 1.45192 * 116.99903 * 180.02562 * 17 15 14 19 19 C 1.52999 * 109.47468 * 59.99736 * 18 17 15 20 20 C 1.53004 * 109.47033 * 180.02562 * 18 17 15 21 21 C 1.53002 * 109.47150 * 299.99625 * 18 17 15 22 22 C 1.53777 * 113.61344 * 185.00075 * 9 8 7 23 23 C 1.47020 * 105.61327 * 180.12518 * 3 2 1 24 24 C 1.34179 * 105.95633 * 359.63346 * 23 3 2 25 25 C 1.50697 * 125.44118 * 180.19264 * 24 23 3 26 26 O 1.42906 * 109.47243 * 64.99966 * 25 24 23 27 27 Si 1.86299 * 109.47159 * 184.99994 * 25 24 23 28 28 O 1.33647 * 125.80337 * 179.71288 * 2 1 3 29 29 H 1.09004 * 109.46726 * 180.26275 * 1 2 3 30 30 H 1.08997 * 109.47253 * 300.25884 * 1 2 3 31 31 H 1.08990 * 109.47117 * 60.26353 * 1 2 3 32 32 H 0.96996 * 120.00115 * 359.97438 * 6 4 3 33 33 H 1.08995 * 109.46971 * 299.99971 * 7 6 4 34 34 H 1.09002 * 109.47081 * 59.99825 * 7 6 4 35 35 H 1.08995 * 109.47639 * 299.99963 * 8 7 6 36 36 H 1.09002 * 109.47097 * 60.00235 * 8 7 6 37 37 H 1.09005 * 113.61372 * 254.52771 * 11 9 8 38 38 H 1.09000 * 113.61828 * 25.42849 * 11 9 8 39 39 H 0.96999 * 120.00161 * 72.49299 * 14 12 11 40 40 H 1.09003 * 109.46725 * 59.99767 * 19 18 17 41 41 H 1.09001 * 109.47178 * 180.02562 * 19 18 17 42 42 H 1.08999 * 109.47228 * 300.00158 * 19 18 17 43 43 H 1.09005 * 109.46848 * 59.99573 * 20 18 17 44 44 H 1.09001 * 109.47086 * 179.97438 * 20 18 17 45 45 H 1.08996 * 109.47006 * 299.99689 * 20 18 17 46 46 H 1.08999 * 109.46835 * 60.00277 * 21 18 17 47 47 H 1.09001 * 109.47387 * 180.02562 * 21 18 17 48 48 H 1.09005 * 109.47220 * 300.00727 * 21 18 17 49 49 H 1.08998 * 113.61784 * 334.57066 * 22 9 8 50 50 H 1.09005 * 113.61369 * 105.47419 * 22 9 8 51 51 H 1.08002 * 127.02488 * 179.90021 * 23 3 2 52 52 H 1.09005 * 109.46986 * 305.00025 * 25 24 23 53 53 H 0.96695 * 113.99893 * 59.99717 * 26 25 24 54 54 H 1.48506 * 110.00005 * 180.02562 * 27 25 24 55 55 H 1.48502 * 110.00200 * 301.31454 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8739 2.5158 0.0005 5 8 0.6889 2.7892 0.0037 6 7 2.7929 3.5016 -0.0027 7 6 2.3644 4.9025 -0.0027 8 6 3.5946 5.8121 -0.0060 9 6 3.1471 7.2753 -0.0067 10 1 2.3287 7.4673 -0.7006 11 6 2.9110 7.8478 1.4009 12 6 3.5700 9.1434 0.8988 13 1 2.8666 9.8469 0.4535 14 7 4.4574 9.7695 1.8821 15 6 4.0805 10.9044 2.5037 16 8 3.0044 11.4080 2.2490 17 8 4.8963 11.4801 3.4070 18 6 4.4251 12.7001 4.0375 19 6 3.1198 12.4172 4.7839 20 6 5.4793 13.2036 5.0254 21 6 4.1799 13.7655 2.9671 22 6 4.3089 8.2748 -0.1328 23 6 3.6849 0.5992 -0.0031 24 6 3.5860 -0.7389 0.0036 25 6 4.7460 -1.7009 0.0077 26 8 5.4769 -1.5606 1.2276 27 14 4.1069 -3.4449 -0.1363 28 8 2.2889 -1.0839 0.0054 29 1 -0.3633 -1.0277 0.0047 30 1 -0.3633 0.5178 0.8876 31 1 -0.3633 0.5097 -0.8923 32 1 3.7381 3.2836 -0.0050 33 1 1.7645 5.0989 -0.8913 34 1 1.7690 5.1004 0.8886 35 1 4.1942 5.6157 0.8827 36 1 4.1903 5.6144 -0.8972 37 1 1.8571 7.9638 1.6539 38 1 3.4810 7.3412 2.1796 39 1 5.3163 9.3673 2.0857 40 1 3.2945 11.6582 5.5464 41 1 2.7658 13.3333 5.2568 42 1 2.3689 12.0588 4.0797 43 1 6.4090 13.4053 4.4932 44 1 5.1258 14.1198 5.4984 45 1 5.6544 12.4448 5.7880 46 1 3.4291 13.4071 2.2630 47 1 3.8266 14.6816 3.4405 48 1 5.1098 13.9670 2.4353 49 1 5.2613 7.8850 0.2266 50 1 4.3837 8.7354 -1.1180 51 1 4.5928 1.1841 -0.0055 52 1 5.4014 -1.4832 -0.8357 53 1 4.9549 -1.7397 2.0217 54 1 5.2413 -4.4034 -0.1328 55 1 3.1870 -3.7435 0.9906 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13308374.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:53 Heat of formation + Delta-G solvation = -118.755084 kcal Electronic energy + Delta-G solvation = -34397.871471 eV Core-core repulsion = 29596.906470 eV Total energy + Delta-G solvation = -4800.965001 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.208 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -43.76973 -41.90890 -40.69763 -40.19362 -38.15377 -38.03666 -36.35741 -35.38500 -34.39983 -34.07388 -33.15690 -31.46365 -29.37504 -28.39998 -28.32878 -26.78538 -26.54799 -25.48715 -24.34637 -23.52707 -22.21389 -22.04979 -21.40138 -20.74192 -20.35225 -19.11667 -18.99631 -18.00342 -17.74319 -17.68499 -17.21177 -16.98565 -16.80878 -16.64883 -16.43193 -16.16206 -15.89352 -15.71474 -15.56279 -15.41599 -14.98631 -14.73093 -14.52481 -14.21127 -14.16399 -13.93779 -13.87069 -13.75803 -13.64866 -13.39847 -13.37539 -13.18074 -12.94878 -12.93729 -12.89465 -12.85075 -12.82520 -12.62253 -12.38461 -12.29691 -12.18157 -11.85114 -11.64393 -11.42173 -11.23525 -11.15899 -11.10536 -10.94983 -10.73063 -10.15647 -10.13542 -9.58830 -4.93934 0.22492 0.83069 1.17261 1.17533 1.42536 1.70844 1.71872 1.91913 2.17755 2.25003 3.14846 3.17744 3.38747 3.49221 3.50825 3.71555 3.72459 3.76221 3.77738 3.82698 3.84475 3.91695 4.10319 4.13157 4.30294 4.35097 4.39440 4.48690 4.51475 4.58091 4.59027 4.62626 4.64201 4.67773 4.73281 4.75374 4.77841 4.78519 4.83138 4.84799 4.88102 4.96401 5.00551 5.04137 5.11884 5.13098 5.20685 5.22186 5.23942 5.26484 5.33309 5.41328 5.54985 5.60462 5.88624 6.33215 6.39888 6.49292 7.16348 7.33041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.083 3.917 3 C -0.270 4.270 4 C 0.584 3.416 5 O -0.577 6.577 6 N -0.712 5.712 7 C 0.121 3.879 8 C -0.107 4.107 9 C -0.097 4.097 10 H 0.098 0.902 11 C -0.149 4.149 12 C 0.129 3.871 13 H 0.099 0.901 14 N -0.689 5.689 15 C 0.641 3.359 16 O -0.597 6.597 17 O -0.370 6.370 18 C 0.127 3.873 19 C -0.180 4.180 20 C -0.138 4.138 21 C -0.180 4.180 22 C -0.124 4.124 23 C -0.144 4.144 24 C -0.059 4.059 25 C -0.031 4.031 26 O -0.534 6.534 27 Si 0.768 3.232 28 O -0.173 6.173 29 H 0.098 0.902 30 H 0.091 0.909 31 H 0.096 0.904 32 H 0.414 0.586 33 H 0.060 0.940 34 H 0.055 0.945 35 H 0.083 0.917 36 H 0.089 0.911 37 H 0.059 0.941 38 H 0.094 0.906 39 H 0.417 0.583 40 H 0.061 0.939 41 H 0.086 0.914 42 H 0.062 0.938 43 H 0.070 0.930 44 H 0.098 0.902 45 H 0.069 0.931 46 H 0.062 0.938 47 H 0.086 0.914 48 H 0.062 0.938 49 H 0.108 0.892 50 H 0.084 0.916 51 H 0.180 0.820 52 H 0.160 0.840 53 H 0.390 0.610 54 H -0.282 1.282 55 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.473 -1.577 -1.722 5.950 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.030 3.970 3 C -0.274 4.274 4 C 0.373 3.627 5 O -0.459 6.459 6 N -0.364 5.364 7 C -0.003 4.003 8 C -0.144 4.144 9 C -0.116 4.116 10 H 0.116 0.884 11 C -0.188 4.188 12 C 0.025 3.975 13 H 0.117 0.883 14 N -0.348 5.348 15 C 0.395 3.605 16 O -0.488 6.488 17 O -0.285 6.285 18 C 0.091 3.909 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.162 4.162 23 C -0.163 4.163 24 C -0.107 4.107 25 C -0.140 4.140 26 O -0.342 6.342 27 Si 0.672 3.328 28 O -0.070 6.070 29 H 0.117 0.883 30 H 0.109 0.891 31 H 0.115 0.885 32 H 0.250 0.750 33 H 0.078 0.922 34 H 0.073 0.927 35 H 0.102 0.898 36 H 0.108 0.892 37 H 0.078 0.922 38 H 0.112 0.888 39 H 0.254 0.746 40 H 0.080 0.920 41 H 0.105 0.895 42 H 0.081 0.919 43 H 0.089 0.911 44 H 0.117 0.883 45 H 0.088 0.912 46 H 0.081 0.919 47 H 0.105 0.895 48 H 0.081 0.919 49 H 0.126 0.874 50 H 0.103 0.897 51 H 0.198 0.802 52 H 0.177 0.823 53 H 0.240 0.760 54 H -0.209 1.209 55 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 4.495 -1.959 -1.817 5.229 hybrid contribution 0.475 0.487 1.382 1.540 sum 4.970 -1.472 -0.435 5.202 Atomic orbital electron populations 1.20566 0.82660 1.05042 1.04945 1.23210 0.94771 0.83077 0.95968 1.21247 0.94373 0.93460 1.18324 1.17406 0.85241 0.84537 0.75483 1.90781 1.18117 1.84724 1.52291 1.45709 1.10120 1.05943 1.74635 1.21402 0.98071 0.79172 1.01631 1.21674 0.96124 0.92309 1.04326 1.22197 0.99013 0.93503 0.96917 0.88362 1.23632 1.01243 0.95944 0.97989 1.22661 0.92992 0.92789 0.89044 0.88300 1.44814 1.23477 1.23660 1.42840 1.18486 0.82100 0.81483 0.78470 1.90901 1.24294 1.65547 1.68043 1.86310 1.47668 1.41675 1.52817 1.22341 0.95656 0.80331 0.92593 1.22471 0.97059 1.03530 1.00662 1.21891 0.97699 1.02262 0.97597 1.22475 1.02826 0.99003 0.99416 1.23391 0.98684 0.95089 0.99034 1.22816 0.96353 0.93585 1.03582 1.22851 0.82784 0.96010 1.09065 1.24499 0.91164 1.07228 0.91159 1.86638 1.40073 1.91564 1.15955 0.93551 0.78202 0.72213 0.88831 1.83690 1.16908 1.34978 1.71416 0.88339 0.89081 0.88547 0.74962 0.92169 0.92698 0.89812 0.89231 0.92173 0.88761 0.74550 0.91999 0.89470 0.91922 0.91097 0.88337 0.91195 0.91876 0.89479 0.91862 0.87396 0.89701 0.80248 0.82263 0.76033 1.20869 1.22293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.04 9.14 71.24 0.65 0.61 16 2 C 0.08 0.29 7.37 25.26 0.19 0.48 16 3 C -0.27 -0.99 6.31 -18.99 -0.12 -1.11 16 4 C 0.58 3.54 7.81 86.65 0.68 4.21 16 5 O -0.58 -7.51 15.66 -4.07 -0.06 -7.57 16 6 N -0.71 0.59 5.55 -466.42 -2.59 -2.00 16 7 C 0.12 -0.21 5.66 86.38 0.49 0.28 16 8 C -0.11 0.86 5.16 30.60 0.16 1.02 16 9 C -0.10 0.63 3.65 -10.27 -0.04 0.60 16 10 H 0.10 -0.56 8.13 -2.39 -0.02 -0.57 16 11 C -0.15 0.45 7.43 31.12 0.23 0.68 16 12 C 0.13 -0.20 4.24 45.52 0.19 0.00 16 13 H 0.10 0.29 7.47 -2.39 -0.02 0.27 16 14 N -0.69 -0.13 5.36 -567.59 -3.04 -3.17 16 15 C 0.64 4.63 8.06 129.79 1.05 5.67 16 16 O -0.60 -7.75 11.48 19.80 0.23 -7.53 16 17 O -0.37 -2.19 9.94 -55.53 -0.55 -2.74 16 18 C 0.13 0.45 1.13 -10.79 -0.01 0.43 16 19 C -0.18 -0.74 8.37 71.98 0.60 -0.14 16 20 C -0.14 0.24 8.85 71.98 0.64 0.88 16 21 C -0.18 -0.68 8.37 71.98 0.60 -0.08 16 22 C -0.12 0.93 7.39 31.12 0.23 1.16 16 23 C -0.14 0.14 10.48 23.65 0.25 0.39 16 24 C -0.06 0.04 6.18 24.76 0.15 0.20 16 25 C -0.03 0.12 2.97 71.24 0.21 0.33 16 26 O -0.53 0.88 12.88 -148.98 -1.92 -1.04 16 27 Si 0.77 -2.22 32.09 68.60 2.20 -0.02 16 28 O -0.17 -0.34 8.90 4.45 0.04 -0.30 16 29 H 0.10 -0.36 8.14 -2.38 -0.02 -0.38 16 30 H 0.09 0.18 8.07 -2.39 -0.02 0.16 16 31 H 0.10 0.11 8.09 -2.39 -0.02 0.09 16 32 H 0.41 -2.69 7.64 -92.71 -0.71 -3.40 16 33 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 34 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 35 H 0.08 -0.80 7.84 -2.39 -0.02 -0.82 16 36 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 37 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 38 H 0.09 -0.39 7.90 -2.39 -0.02 -0.41 16 39 H 0.42 -2.02 8.84 -92.71 -0.82 -2.84 16 40 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 41 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 42 H 0.06 0.61 5.88 -2.39 -0.01 0.59 16 43 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 44 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 45 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 46 H 0.06 0.59 5.88 -2.39 -0.01 0.57 16 47 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 48 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 49 H 0.11 -1.15 8.08 -2.39 -0.02 -1.17 16 50 H 0.08 -0.64 8.14 -2.38 -0.02 -0.66 16 51 H 0.18 -1.14 7.74 -2.91 -0.02 -1.16 16 52 H 0.16 -1.32 7.96 -2.38 -0.02 -1.34 16 53 H 0.39 -2.39 8.70 -74.06 -0.64 -3.04 16 54 H -0.28 -0.76 7.11 99.48 0.71 -0.06 16 55 H -0.30 -1.13 7.11 99.48 0.71 -0.42 16 Total: 0.00 -23.86 448.75 -0.76 -24.62 By element: Atomic # 1 Polarization: -14.64 SS G_CDS: -1.21 Total: -15.85 kcal Atomic # 6 Polarization: 9.46 SS G_CDS: 6.15 Total: 15.61 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -5.63 Total: -5.17 kcal Atomic # 8 Polarization: -16.91 SS G_CDS: -2.27 Total: -19.18 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.20 Total: -0.02 kcal Total: -23.86 -0.76 -24.62 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13308374.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.136 kcal (2) G-P(sol) polarization free energy of solvation -23.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.992 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.763 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds