Wall clock time and date at job start Thu Mar 4 2021 12:28:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46997 * 2 1 4 4 C 1.52998 * 109.47021 * 239.99781 * 2 1 3 5 5 O 1.45205 * 109.46911 * 119.99874 * 2 1 3 6 6 C 1.34636 * 116.99806 * 60.00322 * 5 2 1 7 7 O 1.21513 * 120.00153 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99531 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99665 * 179.72227 * 8 6 5 10 10 H 1.09002 * 112.85201 * 24.08188 * 9 8 6 11 11 C 1.53784 * 113.61491 * 155.28109 * 9 8 6 12 12 C 1.53783 * 87.08338 * 139.98310 * 11 9 8 13 13 H 1.08994 * 113.61765 * 89.19652 * 12 11 9 14 14 C 1.53002 * 113.60920 * 220.02037 * 12 11 9 15 15 C 1.53006 * 109.46819 * 184.99597 * 14 12 11 16 16 N 1.46495 * 109.47061 * 179.97438 * 15 14 12 17 17 C 1.34784 * 119.99907 * 180.02562 * 16 15 14 18 18 O 1.21605 * 120.00046 * 359.97438 * 17 16 15 19 19 C 1.47374 * 119.99720 * 179.97438 * 17 16 15 20 20 C 1.36421 * 127.19605 * 359.68132 * 19 17 16 21 21 O 1.33655 * 108.39748 * 179.83706 * 20 19 17 22 22 C 1.34218 * 110.90913 * 0.44921 * 21 20 19 23 23 C 1.50691 * 125.43678 * 179.72485 * 22 21 20 24 24 O 1.42901 * 109.47088 * 244.99733 * 23 22 21 25 25 Si 1.86298 * 109.47367 * 5.00027 * 23 22 21 26 26 C 1.34187 * 109.12144 * 359.72462 * 22 21 20 27 27 C 1.53780 * 87.07825 * 334.56565 * 12 11 9 28 28 H 1.08999 * 109.46874 * 299.99879 * 1 2 3 29 29 H 1.08996 * 109.47160 * 59.99677 * 1 2 3 30 30 H 1.08994 * 109.47124 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47127 * 179.97438 * 3 2 1 32 32 H 1.09001 * 109.46984 * 299.99604 * 3 2 1 33 33 H 1.08999 * 109.47210 * 60.00327 * 3 2 1 34 34 H 1.09000 * 109.47347 * 300.00334 * 4 2 1 35 35 H 1.09001 * 109.46931 * 59.99857 * 4 2 1 36 36 H 1.09004 * 109.46918 * 179.97438 * 4 2 1 37 37 H 0.97001 * 120.00485 * 0.02562 * 8 6 5 38 38 H 1.09000 * 113.61044 * 254.52540 * 11 9 8 39 39 H 1.09001 * 113.61354 * 25.42535 * 11 9 8 40 40 H 1.08994 * 109.47329 * 304.99447 * 14 12 11 41 41 H 1.08993 * 109.47199 * 64.99972 * 14 12 11 42 42 H 1.08994 * 109.47047 * 300.00022 * 15 14 12 43 43 H 1.09005 * 109.46601 * 59.99968 * 15 14 12 44 44 H 0.96996 * 120.00317 * 359.97438 * 16 15 14 45 45 H 1.08003 * 125.79758 * 359.97438 * 20 19 17 46 46 H 1.09006 * 109.47246 * 124.99943 * 23 22 21 47 47 H 0.96703 * 113.99983 * 179.97438 * 24 23 22 48 48 H 1.48502 * 109.99983 * 178.67904 * 25 23 22 49 49 H 1.48502 * 109.99885 * 299.99998 * 25 23 22 50 50 H 1.07998 * 127.02180 * 180.02562 * 26 22 21 51 51 H 1.08998 * 113.61772 * 270.88604 * 27 12 11 52 52 H 1.09001 * 113.61751 * 139.98662 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5040 8 7 2.0680 -2.6657 2.4167 9 6 1.6694 -4.0652 2.5860 10 1 1.4171 -4.5505 1.6431 11 6 2.6384 -4.8805 3.4585 12 6 1.3976 -5.5478 4.0750 13 1 1.0707 -6.4398 3.5407 14 6 1.5059 -5.7662 5.5854 15 6 0.2830 -6.5430 6.0774 16 7 0.3870 -6.7527 7.5235 17 6 -0.5837 -7.4191 8.1794 18 8 -1.5461 -7.8460 7.5708 19 6 -0.4788 -7.6305 9.6341 20 6 0.5313 -7.2235 10.4559 21 8 0.2426 -7.6100 11.7024 22 6 -0.9245 -8.2718 11.7405 23 6 -1.5573 -8.8565 12.9768 24 8 -1.6052 -10.2799 12.8597 25 14 -0.5476 -8.3899 14.4713 26 6 -1.4377 -8.3296 10.5020 27 6 0.6205 -4.2777 3.6904 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2075 -2.1392 36 1 3.1300 -0.7209 -1.2494 37 1 2.6276 -2.2368 3.0830 38 1 3.2660 -5.5667 2.8899 39 1 3.2048 -4.2743 4.1655 40 1 2.4099 -6.3336 5.8066 41 1 1.5502 -4.8010 6.0898 42 1 -0.6209 -5.9757 5.8562 43 1 0.2388 -7.5083 5.5729 44 1 1.1548 -6.4126 8.0090 45 1 1.4131 -6.6794 10.1513 46 1 -2.5694 -8.4666 13.0860 47 1 -2.0011 -10.7241 13.6220 48 1 -1.1788 -8.9337 15.7006 49 1 0.8345 -8.9156 14.3348 50 1 -2.3658 -8.7944 10.2038 51 1 0.6353 -3.5067 4.4607 52 1 -0.3809 -4.4772 3.3089 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13456056.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:35 Heat of formation + Delta-G solvation = -113.615789 kcal Electronic energy + Delta-G solvation = -32003.000881 eV Core-core repulsion = 27357.796356 eV Total energy + Delta-G solvation = -4645.204525 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -43.71482 -41.89577 -40.71592 -40.19512 -38.08286 -38.02656 -36.36655 -35.37926 -34.36478 -33.95638 -32.31164 -31.06492 -28.39204 -28.31805 -26.97230 -26.66091 -26.18836 -24.66145 -23.47573 -22.32011 -22.10988 -21.40733 -20.89573 -20.32376 -19.10482 -19.00904 -18.77049 -17.76494 -17.34565 -17.22039 -17.18232 -16.98817 -16.63776 -16.44246 -16.22017 -15.90707 -15.78787 -15.56170 -15.41429 -15.03385 -14.70088 -14.50463 -14.20424 -14.05550 -13.82210 -13.78891 -13.56845 -13.37491 -13.36324 -13.17362 -12.93538 -12.88332 -12.83531 -12.82680 -12.61521 -12.37415 -12.28507 -12.13828 -11.83468 -11.65744 -11.41176 -11.22380 -11.17125 -11.09854 -10.97777 -10.64876 -10.19809 -10.12149 -9.77369 -4.91899 0.26012 0.79004 1.17979 1.18604 1.47164 1.73317 1.75442 1.97093 2.07094 2.24918 3.16368 3.34505 3.49983 3.51448 3.52291 3.57972 3.72610 3.77242 3.84258 3.86042 3.92694 3.95241 4.11200 4.26537 4.32214 4.36039 4.44852 4.51109 4.52535 4.58888 4.64297 4.69159 4.74236 4.78318 4.80061 4.83898 4.85831 4.89873 4.90122 4.97993 5.01697 5.05839 5.12176 5.13977 5.23004 5.24808 5.28065 5.34260 5.38303 5.56439 5.62195 5.84899 6.41756 6.48072 6.50229 7.15322 7.34767 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.137 4.137 4 C -0.180 4.180 5 O -0.369 6.369 6 C 0.641 3.359 7 O -0.598 6.598 8 N -0.688 5.688 9 C 0.128 3.872 10 H 0.096 0.904 11 C -0.122 4.122 12 C -0.099 4.099 13 H 0.094 0.906 14 C -0.105 4.105 15 C 0.118 3.882 16 N -0.709 5.709 17 C 0.584 3.416 18 O -0.590 6.590 19 C -0.271 4.271 20 C 0.068 3.932 21 O -0.168 6.168 22 C -0.015 4.015 23 C -0.053 4.053 24 O -0.559 6.559 25 Si 0.788 3.212 26 C -0.152 4.152 27 C -0.149 4.149 28 H 0.062 0.938 29 H 0.086 0.914 30 H 0.061 0.939 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.070 0.930 34 H 0.062 0.938 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.418 0.582 38 H 0.083 0.917 39 H 0.111 0.889 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.054 0.946 43 H 0.055 0.945 44 H 0.418 0.582 45 H 0.268 0.732 46 H 0.121 0.879 47 H 0.405 0.595 48 H -0.269 1.269 49 H -0.303 1.303 50 H 0.144 0.856 51 H 0.098 0.902 52 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.169 6.116 5.552 10.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.238 4.238 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.489 6.489 8 N -0.347 5.347 9 C 0.024 3.976 10 H 0.114 0.886 11 C -0.160 4.160 12 C -0.118 4.118 13 H 0.112 0.888 14 C -0.143 4.143 15 C -0.005 4.005 16 N -0.361 5.361 17 C 0.373 3.627 18 O -0.472 6.472 19 C -0.276 4.276 20 C -0.002 4.002 21 O -0.063 6.063 22 C -0.063 4.063 23 C -0.160 4.160 24 O -0.371 6.371 25 Si 0.690 3.310 26 C -0.172 4.172 27 C -0.188 4.188 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.080 0.920 31 H 0.089 0.911 32 H 0.116 0.884 33 H 0.089 0.911 34 H 0.081 0.919 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.255 0.745 38 H 0.101 0.899 39 H 0.130 0.870 40 H 0.111 0.889 41 H 0.109 0.891 42 H 0.073 0.927 43 H 0.073 0.927 44 H 0.256 0.744 45 H 0.284 0.716 46 H 0.138 0.862 47 H 0.258 0.742 48 H -0.194 1.194 49 H -0.230 1.230 50 H 0.162 0.838 51 H 0.116 0.884 52 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 6.044 5.531 5.009 9.603 hybrid contribution -0.658 -1.235 -0.211 1.416 sum 5.386 4.296 4.798 8.395 Atomic orbital electron populations 1.22472 0.94199 1.03587 1.03490 1.22335 0.94346 0.92642 0.81558 1.21891 1.02503 0.90805 1.04248 1.22476 1.01680 1.02195 0.97405 1.86310 1.71542 1.23360 1.47192 1.18496 0.78663 0.80779 0.82637 1.90904 1.42368 1.70988 1.44628 1.44799 1.54706 1.12384 1.22817 1.22663 0.97600 0.78573 0.98765 0.88558 1.23388 0.96298 0.98193 0.98163 1.22199 0.96739 0.97215 0.95688 0.88768 1.21681 0.96785 1.01443 0.94358 1.21421 0.99866 1.00131 0.79074 1.45662 1.23947 1.56884 1.09596 1.17520 0.82172 0.77236 0.85802 1.90787 1.34137 1.52514 1.69734 1.21492 1.00159 1.11685 0.94229 1.25376 0.99109 0.96569 0.79137 1.83698 1.34466 1.56984 1.31173 1.21344 0.86767 1.01530 0.96693 1.24225 1.06377 0.83601 1.01797 1.86526 1.85515 1.17317 1.47713 0.93546 0.74939 0.90304 0.72170 1.22564 1.01416 1.01732 0.91520 1.23641 0.98229 0.98496 0.98430 0.91934 0.89513 0.91961 0.91078 0.88380 0.91131 0.91918 0.89518 0.91838 0.74463 0.89866 0.87046 0.88929 0.89088 0.92716 0.92702 0.74420 0.71616 0.86177 0.74250 1.19428 1.23004 0.83784 0.88392 0.92419 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 2 C 0.13 0.41 1.13 -10.79 -0.01 0.40 16 3 C -0.14 0.29 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.66 8.37 71.98 0.60 -0.06 16 5 O -0.37 -2.01 9.94 -55.45 -0.55 -2.56 16 6 C 0.64 4.37 8.06 129.79 1.05 5.42 16 7 O -0.60 -7.69 11.48 19.80 0.23 -7.46 16 8 N -0.69 0.32 5.36 -567.60 -3.04 -2.72 16 9 C 0.13 -0.25 4.24 45.52 0.19 -0.06 16 10 H 0.10 0.29 7.47 -2.39 -0.02 0.27 16 11 C -0.12 1.02 7.39 31.12 0.23 1.25 16 12 C -0.10 0.71 3.65 -10.27 -0.04 0.67 16 13 H 0.09 -0.52 8.13 -2.39 -0.02 -0.54 16 14 C -0.11 1.02 5.17 30.60 0.16 1.18 16 15 C 0.12 -0.27 5.66 86.38 0.49 0.22 16 16 N -0.71 1.92 5.55 -466.42 -2.59 -0.66 16 17 C 0.58 4.05 7.81 86.65 0.68 4.73 16 18 O -0.59 -10.45 16.98 -4.05 -0.07 -10.52 16 19 C -0.27 -1.05 6.31 -18.99 -0.12 -1.17 16 20 C 0.07 -0.31 11.61 67.40 0.78 0.47 16 21 O -0.17 0.03 8.90 4.42 0.04 0.07 16 22 C -0.02 -0.05 6.22 24.76 0.15 0.10 16 23 C -0.05 0.06 2.96 71.23 0.21 0.27 16 24 O -0.56 -1.08 12.86 -148.98 -1.92 -3.00 16 25 Si 0.79 -2.69 32.09 68.60 2.20 -0.48 16 26 C -0.15 -1.11 10.90 23.65 0.26 -0.85 16 27 C -0.15 0.54 7.43 31.12 0.23 0.77 16 28 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 29 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 30 H 0.06 0.60 5.88 -2.39 -0.01 0.58 16 31 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 32 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 34 H 0.06 0.58 5.88 -2.39 -0.01 0.56 16 35 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 36 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 37 H 0.42 -2.43 8.84 -92.71 -0.82 -3.25 16 38 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 39 H 0.11 -1.35 8.08 -2.39 -0.02 -1.36 16 40 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 41 H 0.09 -1.13 7.84 -2.39 -0.02 -1.15 16 42 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 43 H 0.05 0.07 8.14 -2.38 -0.02 0.05 16 44 H 0.42 -4.82 7.44 -92.71 -0.69 -5.51 16 45 H 0.27 -4.56 7.47 -2.91 -0.02 -4.58 16 46 H 0.12 -0.73 7.96 -2.38 -0.02 -0.75 16 47 H 0.41 -2.99 8.74 -74.06 -0.65 -3.63 16 48 H -0.27 0.26 7.11 99.48 0.71 0.96 16 49 H -0.30 -1.57 7.11 99.48 0.71 -0.86 16 50 H 0.14 1.38 8.06 -2.91 -0.02 1.36 16 51 H 0.10 -0.53 7.90 -2.39 -0.02 -0.55 16 52 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 Total: 0.00 -33.19 428.90 -0.76 -33.95 By element: Atomic # 1 Polarization: -19.59 SS G_CDS: -1.16 Total: -20.76 kcal Atomic # 6 Polarization: 8.06 SS G_CDS: 6.10 Total: 14.16 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -5.63 Total: -3.39 kcal Atomic # 8 Polarization: -21.21 SS G_CDS: -2.27 Total: -23.48 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.20 Total: -0.48 kcal Total: -33.19 -0.76 -33.95 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13456056.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.667 kcal (2) G-P(sol) polarization free energy of solvation -33.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.949 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds