Wall clock time and date at job start Thu Mar 4 2021 12:28:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37866 * 126.46148 * 2 1 4 4 C 1.46682 * 126.23209 * 359.96324 * 3 2 1 5 5 O 1.21693 * 119.99805 * 0.02562 * 4 3 2 6 6 N 1.34777 * 120.00182 * 180.02562 * 4 3 2 7 7 C 1.46498 * 119.99828 * 180.27909 * 6 4 3 8 8 C 1.52996 * 109.47059 * 179.72339 * 7 6 4 9 9 C 1.53003 * 109.47301 * 179.97438 * 8 7 6 10 10 H 1.08999 * 112.84996 * 316.19397 * 9 8 7 11 11 C 1.53786 * 113.61178 * 87.50273 * 9 8 7 12 12 C 1.53779 * 87.08072 * 139.98314 * 11 9 8 13 13 H 1.09000 * 113.69171 * 89.11949 * 12 11 9 14 14 N 1.46495 * 113.61435 * 220.01948 * 12 11 9 15 15 C 1.34783 * 120.00099 * 252.49700 * 14 12 11 16 16 O 1.21512 * 119.99618 * 359.97438 * 15 14 12 17 17 O 1.34632 * 120.00346 * 179.97438 * 15 14 12 18 18 C 1.45201 * 116.99893 * 179.97438 * 17 15 14 19 19 C 1.53001 * 109.46990 * 60.00041 * 18 17 15 20 20 C 1.53003 * 109.46937 * 179.97438 * 18 17 15 21 21 C 1.52998 * 109.47475 * 299.99897 * 18 17 15 22 22 C 1.53781 * 87.08084 * 334.56387 * 12 11 9 23 23 N 1.37649 * 107.53826 * 180.22838 * 3 2 1 24 24 C 1.35537 * 108.64009 * 359.56556 * 23 3 2 25 25 C 1.50697 * 125.56124 * 180.13441 * 24 23 3 26 26 O 1.42903 * 109.47163 * 245.35273 * 25 24 23 27 27 Si 1.86305 * 109.47405 * 5.35533 * 25 24 23 28 28 C 1.35445 * 108.87112 * 0.43916 * 24 23 3 29 29 H 1.09009 * 109.47201 * 90.00184 * 1 2 3 30 30 H 1.08997 * 109.47282 * 209.99698 * 1 2 3 31 31 H 1.08998 * 109.47360 * 329.99976 * 1 2 3 32 32 H 0.97001 * 119.99727 * 359.97438 * 6 4 3 33 33 H 1.09004 * 109.46963 * 299.72135 * 7 6 4 34 34 H 1.08994 * 109.47567 * 59.72287 * 7 6 4 35 35 H 1.09004 * 109.47066 * 299.99732 * 8 7 6 36 36 H 1.09000 * 109.47665 * 59.99541 * 8 7 6 37 37 H 1.09000 * 113.61021 * 254.53159 * 11 9 8 38 38 H 1.08999 * 113.61769 * 25.43158 * 11 9 8 39 39 H 0.96995 * 120.00460 * 72.49086 * 14 12 11 40 40 H 1.09003 * 109.46930 * 59.99927 * 19 18 17 41 41 H 1.09003 * 109.46707 * 179.97438 * 19 18 17 42 42 H 1.08997 * 109.46895 * 299.99709 * 19 18 17 43 43 H 1.08997 * 109.47056 * 60.00280 * 20 18 17 44 44 H 1.08995 * 109.47138 * 180.02562 * 20 18 17 45 45 H 1.09000 * 109.47131 * 299.99892 * 20 18 17 46 46 H 1.09001 * 109.46732 * 59.99686 * 21 18 17 47 47 H 1.08995 * 109.47217 * 180.02562 * 21 18 17 48 48 H 1.09002 * 109.46559 * 300.00500 * 21 18 17 49 49 H 1.08994 * 113.61880 * 270.88852 * 22 12 11 50 50 H 1.09003 * 113.61410 * 139.97943 * 22 12 11 51 51 H 0.96998 * 125.68022 * 179.70671 * 23 3 2 52 52 H 1.08996 * 109.47004 * 125.35562 * 25 24 23 53 53 H 0.96704 * 113.99996 * 179.97438 * 26 25 24 54 54 H 1.48502 * 109.99871 * 178.67858 * 27 25 24 55 55 H 1.48501 * 109.99622 * 299.99671 * 27 25 24 56 56 H 1.08003 * 126.06504 * 179.68986 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8899 2.5092 -0.0008 5 8 0.7027 2.7766 -0.0010 6 7 2.8038 3.4998 -0.0012 7 6 2.3679 4.8985 0.0042 8 6 3.5933 5.8145 0.0095 9 6 3.1381 7.2753 0.0145 10 1 2.3211 7.4664 -0.6812 11 6 2.8943 7.8396 1.4241 12 6 3.5482 9.1411 0.9307 13 1 2.8437 9.8441 0.4863 14 7 4.4291 9.7669 1.9199 15 6 4.0442 10.8967 2.5460 16 8 2.9666 11.3964 2.2895 17 8 4.8534 11.4716 3.4555 18 6 4.3742 12.6867 4.0896 19 6 3.0668 12.3947 4.8289 20 6 5.4213 13.1894 5.0855 21 6 4.1291 13.7561 3.0232 22 6 4.2952 8.2814 -0.1027 23 7 3.6284 0.6624 -0.0052 24 6 3.6217 -0.6929 0.0013 25 6 4.8433 -1.5754 0.0015 26 8 4.8964 -2.3157 -1.2197 27 14 6.3713 -0.5207 0.1553 28 6 2.3379 -1.1247 0.0008 29 1 -0.3634 0.0000 -1.0277 30 1 -0.3634 -0.8900 0.5138 31 1 -0.3634 0.8899 0.5138 32 1 3.7501 3.2867 -0.0006 33 1 1.7702 5.0962 -0.8856 34 1 1.7683 5.0888 0.8943 35 1 4.1910 5.6168 0.8994 36 1 4.1931 5.6243 -0.8806 37 1 1.8390 7.9487 1.6742 38 1 3.4645 7.3322 2.2023 39 1 5.2893 9.3682 2.1245 40 1 3.2415 11.6328 5.5887 41 1 2.7073 13.3068 5.3053 42 1 2.3207 12.0363 4.1197 43 1 6.3529 13.3974 4.5592 44 1 5.0614 14.1013 5.5618 45 1 5.5955 12.4274 5.8452 46 1 3.3829 13.3977 2.3141 47 1 3.7698 14.6684 3.4993 48 1 5.0605 13.9641 2.4965 49 1 5.2483 7.8948 0.2580 50 1 4.3708 8.7473 -1.0853 51 1 4.4190 1.2242 -0.0105 52 1 4.7924 -2.2661 0.8431 53 1 5.6592 -2.9060 -1.2889 54 1 7.5812 -1.3812 0.1887 55 1 6.4524 0.4254 -0.9864 56 1 2.0136 -2.1549 0.0005 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_13940406.mol2 56 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:39 Heat of formation + Delta-G solvation = -89.368832 kcal Electronic energy + Delta-G solvation = -34395.306070 eV Core-core repulsion = 29693.334015 eV Total energy + Delta-G solvation = -4701.972055 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.219 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -42.61519 -41.89493 -40.57996 -40.07817 -38.03308 -37.84683 -36.44400 -35.38785 -34.32965 -33.68260 -32.17687 -30.91612 -28.38961 -28.37985 -28.31689 -27.24164 -26.66975 -25.64530 -23.89614 -22.39097 -22.17479 -21.53153 -21.38200 -20.51903 -20.29876 -19.49695 -19.10220 -18.64726 -17.73643 -17.20112 -17.05662 -16.90547 -16.68255 -16.51899 -16.23218 -15.82636 -15.64768 -15.52165 -15.34006 -15.21816 -14.91436 -14.63690 -14.51248 -14.02473 -13.99612 -13.75638 -13.70003 -13.65474 -13.51811 -13.38193 -13.36180 -13.17257 -13.07480 -12.93436 -12.88246 -12.83840 -12.61753 -12.56937 -12.37540 -12.28867 -12.07283 -11.84208 -11.62563 -11.40944 -11.22451 -11.12119 -11.06413 -10.58278 -10.26263 -10.12307 -9.82424 -9.19256 -5.06485 0.26178 1.12779 1.18504 1.46958 1.51522 1.73384 1.78474 1.93466 2.09796 2.25492 3.16288 3.36275 3.49669 3.51547 3.72473 3.72742 3.77346 3.78792 3.84120 3.85519 3.92844 4.08451 4.14505 4.25987 4.32153 4.35952 4.42344 4.52317 4.59158 4.63842 4.67490 4.71517 4.74457 4.77919 4.79409 4.83662 4.84878 4.85983 4.87352 4.89454 4.96859 5.00666 5.05316 5.11681 5.13604 5.20961 5.25009 5.27446 5.30570 5.34654 5.39014 5.56148 5.61860 5.64093 5.83759 6.26195 6.41591 6.46143 6.56845 7.07970 7.34733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C -0.093 4.093 3 C -0.062 4.062 4 C 0.587 3.413 5 O -0.562 6.562 6 N -0.718 5.718 7 C 0.120 3.880 8 C -0.108 4.108 9 C -0.098 4.098 10 H 0.096 0.904 11 C -0.148 4.148 12 C 0.128 3.872 13 H 0.097 0.903 14 N -0.688 5.688 15 C 0.641 3.359 16 O -0.597 6.597 17 O -0.369 6.369 18 C 0.127 3.873 19 C -0.180 4.180 20 C -0.137 4.137 21 C -0.180 4.180 22 C -0.124 4.124 23 N -0.521 5.521 24 C 0.067 3.933 25 C -0.064 4.064 26 O -0.555 6.555 27 Si 0.756 3.244 28 C -0.191 4.191 29 H 0.063 0.937 30 H 0.076 0.924 31 H 0.065 0.935 32 H 0.409 0.591 33 H 0.058 0.942 34 H 0.060 0.940 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.059 0.941 38 H 0.098 0.902 39 H 0.418 0.582 40 H 0.062 0.938 41 H 0.086 0.914 42 H 0.062 0.938 43 H 0.070 0.930 44 H 0.097 0.903 45 H 0.070 0.930 46 H 0.062 0.938 47 H 0.086 0.914 48 H 0.062 0.938 49 H 0.110 0.890 50 H 0.082 0.918 51 H 0.425 0.575 52 H 0.113 0.887 53 H 0.400 0.600 54 H -0.273 1.273 55 H -0.281 1.281 56 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.838 -1.215 3.121 10.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.102 4.102 3 C -0.175 4.175 4 C 0.375 3.625 5 O -0.441 6.441 6 N -0.370 5.370 7 C -0.003 4.003 8 C -0.145 4.145 9 C -0.117 4.117 10 H 0.114 0.886 11 C -0.187 4.187 12 C 0.025 3.975 13 H 0.115 0.885 14 N -0.347 5.347 15 C 0.394 3.606 16 O -0.489 6.489 17 O -0.284 6.284 18 C 0.091 3.909 19 C -0.237 4.237 20 C -0.194 4.194 21 C -0.237 4.237 22 C -0.162 4.162 23 N -0.122 5.122 24 C -0.050 4.050 25 C -0.172 4.172 26 O -0.365 6.365 27 Si 0.658 3.342 28 C -0.215 4.215 29 H 0.082 0.918 30 H 0.095 0.905 31 H 0.083 0.917 32 H 0.246 0.754 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.108 0.892 36 H 0.106 0.894 37 H 0.078 0.922 38 H 0.116 0.884 39 H 0.255 0.745 40 H 0.081 0.919 41 H 0.105 0.895 42 H 0.081 0.919 43 H 0.089 0.911 44 H 0.116 0.884 45 H 0.089 0.911 46 H 0.081 0.919 47 H 0.105 0.895 48 H 0.081 0.919 49 H 0.128 0.872 50 H 0.101 0.899 51 H 0.267 0.733 52 H 0.131 0.869 53 H 0.252 0.748 54 H -0.199 1.199 55 H -0.208 1.208 56 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 8.832 0.033 2.580 9.202 hybrid contribution 0.749 -1.031 -0.772 1.490 sum 9.582 -0.998 1.808 9.802 Atomic orbital electron populations 1.20315 0.89264 1.02905 1.02074 1.20240 0.96368 0.91488 1.02071 1.20071 0.84066 0.93208 1.20120 1.17139 0.85673 0.83592 0.76112 1.90825 1.17673 1.83740 1.51901 1.45776 1.09673 1.06335 1.75210 1.21439 0.98186 0.78819 1.01896 1.21698 0.96119 0.92187 1.04541 1.22191 0.98960 0.93573 0.97001 0.88621 1.23632 1.01303 0.95795 0.97941 1.22653 0.93122 0.92825 0.88934 0.88506 1.44799 1.23444 1.24106 1.42376 1.18492 0.82115 0.81442 0.78512 1.90904 1.24176 1.65570 1.68207 1.86308 1.47774 1.41969 1.52352 1.22341 0.95588 0.80463 0.92531 1.22472 0.97030 1.03504 1.00715 1.21887 0.97770 1.02275 0.97493 1.22471 1.02799 0.98975 0.99469 1.23395 0.98755 0.95136 0.98925 1.41847 1.06918 1.06243 1.57202 1.19784 0.96233 0.82534 1.06481 1.24495 1.02919 0.99511 0.90320 1.86568 1.51626 1.60134 1.38178 0.94657 0.73222 0.80581 0.85760 1.20772 0.91206 0.99137 1.10421 0.91838 0.90475 0.91653 0.75443 0.92326 0.92155 0.89165 0.89368 0.92212 0.88405 0.74494 0.91928 0.89527 0.91930 0.91105 0.88390 0.91129 0.91910 0.89520 0.91880 0.87183 0.89937 0.73291 0.86906 0.74803 1.19888 1.20822 0.83244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.65 9.83 71.23 0.70 0.05 16 2 C -0.09 -0.70 6.21 -19.57 -0.12 -0.82 16 3 C -0.06 -0.31 7.06 40.35 0.28 -0.03 16 4 C 0.59 3.71 7.79 86.45 0.67 4.38 16 5 O -0.56 -8.06 14.80 -4.33 -0.06 -8.12 16 6 N -0.72 1.53 5.55 -467.09 -2.59 -1.06 16 7 C 0.12 -0.33 5.66 86.38 0.49 0.16 16 8 C -0.11 1.03 5.16 30.59 0.16 1.19 16 9 C -0.10 0.72 3.65 -10.26 -0.04 0.68 16 10 H 0.10 -0.57 8.13 -2.39 -0.02 -0.59 16 11 C -0.15 0.60 7.43 31.12 0.23 0.83 16 12 C 0.13 -0.29 4.24 45.52 0.19 -0.09 16 13 H 0.10 0.26 7.46 -2.39 -0.02 0.24 16 14 N -0.69 0.46 5.36 -567.61 -3.04 -2.58 16 15 C 0.64 4.22 8.06 129.79 1.05 5.26 16 16 O -0.60 -7.52 11.48 19.80 0.23 -7.29 16 17 O -0.37 -1.94 9.94 -55.41 -0.55 -2.49 16 18 C 0.13 0.39 1.13 -10.79 -0.01 0.37 16 19 C -0.18 -0.66 8.37 71.98 0.60 -0.06 16 20 C -0.14 0.31 8.85 71.98 0.64 0.95 16 21 C -0.18 -0.63 8.37 71.98 0.60 -0.02 16 22 C -0.12 1.03 7.39 31.12 0.23 1.26 16 23 N -0.52 0.64 5.47 -171.94 -0.94 -0.30 16 24 C 0.07 0.05 6.13 41.34 0.25 0.30 16 25 C -0.06 0.29 2.98 71.23 0.21 0.50 16 26 O -0.55 0.62 12.86 -148.98 -1.92 -1.30 16 27 Si 0.76 -6.12 30.98 68.60 2.13 -3.99 16 28 C -0.19 -0.91 10.66 22.01 0.23 -0.67 16 29 H 0.06 0.48 8.14 -2.38 -0.02 0.46 16 30 H 0.08 0.30 8.14 -2.39 -0.02 0.28 16 31 H 0.06 0.69 6.49 -2.39 -0.02 0.68 16 32 H 0.41 -3.71 7.60 -92.71 -0.70 -4.41 16 33 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 34 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.09 -1.10 7.85 -2.38 -0.02 -1.11 16 36 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 37 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.10 -0.57 7.90 -2.39 -0.02 -0.59 16 39 H 0.42 -2.49 8.84 -92.71 -0.82 -3.31 16 40 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 41 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 42 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 45 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 46 H 0.06 0.57 5.88 -2.39 -0.01 0.55 16 47 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 48 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 49 H 0.11 -1.31 8.08 -2.39 -0.02 -1.33 16 50 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 51 H 0.43 -3.41 6.00 -92.71 -0.56 -3.97 16 52 H 0.11 -0.98 7.96 -2.39 -0.02 -0.99 16 53 H 0.40 -3.87 8.74 -74.05 -0.65 -4.52 16 54 H -0.27 0.97 7.11 99.48 0.71 1.68 16 55 H -0.28 0.77 7.11 99.48 0.71 1.48 16 56 H 0.15 0.44 8.06 -2.91 -0.02 0.42 16 Total: 0.00 -27.61 448.46 -2.14 -29.75 By element: Atomic # 1 Polarization: -15.10 SS G_CDS: -1.77 Total: -16.87 kcal Atomic # 6 Polarization: 7.87 SS G_CDS: 6.38 Total: 14.25 kcal Atomic # 7 Polarization: 2.64 SS G_CDS: -6.58 Total: -3.94 kcal Atomic # 8 Polarization: -16.90 SS G_CDS: -2.30 Total: -19.20 kcal Atomic # 14 Polarization: -6.12 SS G_CDS: 2.13 Total: -3.99 kcal Total: -27.61 -2.14 -29.75 kcal The number of atoms in the molecule is 56 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_13940406.mol2 56 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.616 kcal (2) G-P(sol) polarization free energy of solvation -27.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds