Wall clock time and date at job start Thu Mar 4 2021 12:31:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52998 * 109.47142 * 2 1 4 4 C 1.52998 * 109.46904 * 240.00251 * 2 1 3 5 5 O 1.45202 * 109.47104 * 120.00387 * 2 1 3 6 6 C 1.34637 * 116.99617 * 60.00161 * 5 2 1 7 7 O 1.21507 * 120.00725 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99376 * 180.02562 * 6 5 2 9 9 C 1.46505 * 119.99782 * 179.97438 * 8 6 5 10 10 H 1.08996 * 112.91097 * 23.74513 * 9 8 6 11 11 C 1.53778 * 113.61476 * 155.00158 * 9 8 6 12 12 C 1.53778 * 87.08365 * 139.97956 * 11 9 8 13 13 H 1.09004 * 113.61628 * 89.20068 * 12 11 9 14 14 C 1.53004 * 113.61302 * 220.01795 * 12 11 9 15 15 C 1.53003 * 109.46826 * 185.00184 * 14 12 11 16 16 N 1.46501 * 109.46808 * 180.02562 * 15 14 12 17 17 C 1.34777 * 119.99780 * 179.97438 * 16 15 14 18 18 O 1.21690 * 119.99945 * 359.97438 * 17 16 15 19 19 C 1.46679 * 119.99843 * 179.97438 * 17 16 15 20 20 C 1.37867 * 126.23404 * 179.97438 * 19 17 16 21 21 C 1.39834 * 107.08983 * 180.02562 * 20 19 17 22 22 C 1.35457 * 107.85914 * 0.02562 * 21 20 19 23 23 C 1.50706 * 125.55897 * 180.02562 * 22 21 20 24 24 O 1.42895 * 109.46849 * 245.02217 * 23 22 21 25 25 Si 1.86294 * 109.47281 * 5.02699 * 23 22 21 26 26 N 1.35533 * 108.87475 * 0.26448 * 22 21 20 27 27 C 1.53783 * 87.07922 * 334.56386 * 12 11 9 28 28 H 1.08999 * 109.46645 * 299.99768 * 1 2 3 29 29 H 1.08999 * 109.47163 * 59.99739 * 1 2 3 30 30 H 1.09000 * 109.47069 * 179.97438 * 1 2 3 31 31 H 1.09008 * 109.47022 * 179.97438 * 3 2 1 32 32 H 1.08999 * 109.47305 * 300.00174 * 3 2 1 33 33 H 1.08999 * 109.47161 * 60.00548 * 3 2 1 34 34 H 1.09000 * 109.47509 * 300.00038 * 4 2 1 35 35 H 1.08999 * 109.47202 * 60.00034 * 4 2 1 36 36 H 1.09002 * 109.47231 * 180.02562 * 4 2 1 37 37 H 0.97003 * 120.00543 * 359.97438 * 8 6 5 38 38 H 1.09003 * 113.61918 * 25.42273 * 11 9 8 39 39 H 1.09008 * 113.69051 * 254.54065 * 11 9 8 40 40 H 1.08998 * 109.47143 * 64.99454 * 14 12 11 41 41 H 1.09006 * 109.46763 * 304.99608 * 14 12 11 42 42 H 1.08996 * 109.47359 * 59.99553 * 15 14 12 43 43 H 1.09004 * 109.46480 * 299.99439 * 15 14 12 44 44 H 0.97005 * 119.99872 * 359.97438 * 16 15 14 45 45 H 1.08004 * 126.45733 * 0.02562 * 20 19 17 46 46 H 1.07997 * 126.07402 * 180.02562 * 21 20 19 47 47 H 1.09001 * 109.46694 * 125.02684 * 23 22 21 48 48 H 0.96700 * 113.99862 * 60.00665 * 24 23 22 49 49 H 1.48494 * 110.00592 * 58.67856 * 25 23 22 50 50 H 1.48500 * 109.99928 * 179.97438 * 25 23 22 51 51 H 0.96996 * 125.67561 * 179.70945 * 26 22 21 52 52 H 1.09003 * 113.61066 * 139.98368 * 27 12 11 53 53 H 1.08994 * 113.61329 * 270.88206 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6523 -1.9724 1.3381 7 8 0.9509 -2.5095 0.5038 8 7 2.0672 -2.6655 2.4169 9 6 1.6732 -4.0668 2.5833 10 1 1.4197 -4.5511 1.6404 11 6 2.6460 -4.8812 3.4523 12 6 1.4082 -5.5539 4.0690 13 1 1.0832 -6.4456 3.5330 14 6 1.5197 -5.7757 5.5788 15 6 0.3000 -6.5576 6.0707 16 7 0.4064 -6.7695 7.5164 17 6 -0.5618 -7.4394 8.1723 18 8 -1.5246 -7.8679 7.5637 19 6 -0.4550 -7.6521 9.6197 20 6 -1.3651 -8.3150 10.4153 21 6 -0.8695 -8.2813 11.7224 22 6 0.3084 -7.6127 11.7030 23 6 1.1838 -7.3445 12.9000 24 8 1.2399 -5.9376 13.1434 25 14 0.4756 -8.2053 14.3926 26 7 0.5685 -7.2196 10.4322 27 6 0.6267 -4.2851 3.6889 28 1 -0.3632 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1301 1.4425 0.0005 32 1 1.6767 1.9563 -0.8899 33 1 1.6768 1.9563 0.8900 34 1 1.6767 -1.7489 -1.2494 35 1 1.6766 -0.2073 -2.1392 36 1 3.1300 -0.7216 -1.2491 37 1 2.6268 -2.2367 3.0832 38 1 3.2118 -4.2751 4.1598 39 1 3.2756 -5.5644 2.8821 40 1 1.5620 -4.8116 6.0855 41 1 2.4258 -6.3410 5.7970 42 1 0.2577 -7.5216 5.5639 43 1 -0.6061 -5.9923 5.8524 44 1 1.1737 -6.4275 8.0015 45 1 -2.2872 -8.7740 10.0903 46 1 -1.3418 -8.7120 12.5929 47 1 2.1887 -7.7201 12.7066 48 1 0.3793 -5.5350 13.3234 49 1 0.3824 -9.6657 14.1403 50 1 1.3302 -7.9491 15.5798 51 1 1.3475 -6.7192 10.1431 52 1 -0.3747 -4.4868 3.3086 53 1 0.6404 -3.5161 4.4612 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_6580494.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:31:05 Heat of formation + Delta-G solvation = -90.977673 kcal Electronic energy + Delta-G solvation = -32117.717102 eV Core-core repulsion = 27571.212901 eV Total energy + Delta-G solvation = -4546.504201 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.51947 -41.91828 -40.62262 -40.12703 -38.05417 -37.66444 -36.45270 -35.40382 -34.32102 -32.47730 -31.79519 -30.90122 -28.40450 -28.33298 -27.26169 -26.70697 -25.77720 -24.04942 -22.95938 -22.24647 -21.54540 -21.40662 -21.10771 -20.47252 -19.81202 -19.12805 -18.10360 -17.73615 -17.22914 -17.12064 -16.91982 -16.58740 -16.46545 -16.28286 -15.91470 -15.59793 -15.47827 -15.26872 -15.15461 -15.02158 -14.53502 -14.47178 -14.33366 -13.96684 -13.83593 -13.72556 -13.62440 -13.42009 -13.38065 -13.19422 -12.95292 -12.89897 -12.88217 -12.64734 -12.40156 -12.31915 -12.20659 -12.07289 -11.88351 -11.73052 -11.42931 -11.28646 -11.24130 -11.12459 -10.65331 -10.32721 -10.15257 -10.07483 -9.28086 -4.90088 0.28859 1.16228 1.24024 1.54247 1.70988 1.73465 1.91285 2.01496 2.22270 2.26419 3.13747 3.45553 3.47788 3.48778 3.60485 3.71095 3.75525 3.77210 3.80682 3.81941 3.91255 4.07345 4.24262 4.26054 4.30745 4.33420 4.46292 4.50064 4.57665 4.60796 4.62910 4.72864 4.75367 4.75743 4.81962 4.84412 4.85325 4.92942 4.95386 4.97242 5.01749 5.10412 5.12110 5.17373 5.23465 5.24339 5.27430 5.31961 5.53221 5.58468 5.59193 5.78988 6.27149 6.38785 6.44921 6.68695 7.01949 7.32147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.597 6.597 8 N -0.689 5.689 9 C 0.129 3.871 10 H 0.098 0.902 11 C -0.124 4.124 12 C -0.098 4.098 13 H 0.097 0.903 14 C -0.106 4.106 15 C 0.119 3.881 16 N -0.717 5.717 17 C 0.585 3.415 18 O -0.573 6.573 19 C -0.066 4.066 20 C -0.119 4.119 21 C -0.205 4.205 22 C 0.029 3.971 23 C -0.053 4.053 24 O -0.554 6.554 25 Si 0.802 3.198 26 N -0.512 5.512 27 C -0.149 4.149 28 H 0.061 0.939 29 H 0.086 0.914 30 H 0.062 0.938 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.062 0.938 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.417 0.583 38 H 0.108 0.892 39 H 0.084 0.916 40 H 0.086 0.914 41 H 0.089 0.911 42 H 0.060 0.940 43 H 0.058 0.942 44 H 0.410 0.590 45 H 0.145 0.855 46 H 0.170 0.830 47 H 0.117 0.883 48 H 0.399 0.601 49 H -0.287 1.287 50 H -0.295 1.295 51 H 0.428 0.572 52 H 0.060 0.940 53 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.678 3.946 4.460 7.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.395 3.605 7 O -0.488 6.488 8 N -0.348 5.348 9 C 0.025 3.975 10 H 0.116 0.884 11 C -0.162 4.162 12 C -0.117 4.117 13 H 0.116 0.884 14 C -0.144 4.144 15 C -0.005 4.005 16 N -0.368 5.368 17 C 0.374 3.626 18 O -0.453 6.453 19 C -0.180 4.180 20 C -0.146 4.146 21 C -0.228 4.228 22 C -0.091 4.091 23 C -0.163 4.163 24 O -0.362 6.362 25 Si 0.706 3.294 26 N -0.109 5.109 27 C -0.188 4.188 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.081 0.919 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.088 0.912 34 H 0.081 0.919 35 H 0.105 0.895 36 H 0.081 0.919 37 H 0.255 0.745 38 H 0.127 0.873 39 H 0.102 0.898 40 H 0.104 0.896 41 H 0.107 0.893 42 H 0.078 0.922 43 H 0.076 0.924 44 H 0.246 0.754 45 H 0.163 0.837 46 H 0.188 0.812 47 H 0.134 0.866 48 H 0.250 0.750 49 H -0.214 1.214 50 H -0.223 1.223 51 H 0.268 0.732 52 H 0.079 0.921 53 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 4.556 2.897 3.939 6.683 hybrid contribution 0.923 0.311 -0.607 1.148 sum 5.479 3.208 3.332 7.170 Atomic orbital electron populations 1.22472 0.94156 1.03604 1.03497 1.22343 0.94381 0.92636 0.81552 1.21891 1.02486 0.90816 1.04254 1.22473 1.01661 1.02200 0.97393 1.86311 1.71540 1.23360 1.47236 1.18484 0.78669 0.80787 0.82597 1.90902 1.42311 1.70974 1.44598 1.44805 1.54854 1.12324 1.22805 1.22651 0.97504 0.78505 0.98825 0.88353 1.23389 0.96349 0.98232 0.98231 1.22198 0.96751 0.97365 0.95406 0.88438 1.21682 0.96890 1.01172 0.94666 1.21448 0.99836 1.00370 0.78807 1.45785 1.24101 1.56989 1.09970 1.17275 0.82433 0.77689 0.85229 1.90850 1.33529 1.52461 1.68459 1.20315 0.94972 1.12140 0.90537 1.21503 0.99493 1.00602 0.92953 1.20962 0.96592 1.07105 0.98183 1.21369 0.98595 1.02943 0.86143 1.25024 1.02270 0.88626 1.00390 1.86474 1.37295 1.19409 1.93030 0.92976 0.86686 0.77061 0.72644 1.41884 1.19510 1.43000 1.06530 1.23633 0.98373 0.98361 0.98401 0.91959 0.89476 0.91932 0.91106 0.88335 0.91165 0.91903 0.89474 0.91869 0.74535 0.87338 0.89781 0.89572 0.89278 0.92156 0.92370 0.75378 0.83724 0.81233 0.86552 0.75033 1.21369 1.22252 0.73246 0.92147 0.88620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 2 C 0.13 0.42 1.13 -10.79 -0.01 0.41 16 3 C -0.14 0.27 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.66 8.37 71.98 0.60 -0.06 16 5 O -0.37 -2.09 9.94 -55.46 -0.55 -2.64 16 6 C 0.64 4.46 8.06 129.79 1.05 5.51 16 7 O -0.60 -7.65 11.48 19.82 0.23 -7.43 16 8 N -0.69 0.11 5.36 -567.60 -3.04 -2.93 16 9 C 0.13 -0.24 4.24 45.52 0.19 -0.04 16 10 H 0.10 0.28 7.47 -2.39 -0.02 0.26 16 11 C -0.12 0.98 7.39 31.12 0.23 1.21 16 12 C -0.10 0.68 3.65 -10.27 -0.04 0.64 16 13 H 0.10 -0.57 8.13 -2.38 -0.02 -0.59 16 14 C -0.11 0.95 5.17 30.60 0.16 1.11 16 15 C 0.12 -0.28 5.66 86.38 0.49 0.21 16 16 N -0.72 1.51 5.55 -467.07 -2.59 -1.09 16 17 C 0.59 3.48 7.79 86.45 0.67 4.15 16 18 O -0.57 -8.69 16.88 -4.32 -0.07 -8.76 16 19 C -0.07 -0.20 7.06 40.35 0.28 0.09 16 20 C -0.12 -0.46 10.65 22.57 0.24 -0.22 16 21 C -0.20 0.22 9.32 22.01 0.21 0.43 16 22 C 0.03 -0.08 6.47 41.35 0.27 0.18 16 23 C -0.05 0.29 3.08 71.24 0.22 0.51 16 24 O -0.55 2.86 12.88 -148.98 -1.92 0.94 16 25 Si 0.80 -4.52 30.56 68.60 2.10 -2.42 16 26 N -0.51 1.61 5.99 -171.92 -1.03 0.58 16 27 C -0.15 0.52 7.43 31.12 0.23 0.75 16 28 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 29 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 30 H 0.06 0.60 5.88 -2.39 -0.01 0.58 16 31 H 0.07 -0.17 8.14 -2.38 -0.02 -0.18 16 32 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 34 H 0.06 0.58 5.88 -2.39 -0.01 0.56 16 35 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 36 H 0.06 0.17 8.14 -2.39 -0.02 0.16 16 37 H 0.42 -2.21 8.84 -92.71 -0.82 -3.03 16 38 H 0.11 -1.21 8.08 -2.39 -0.02 -1.23 16 39 H 0.08 -0.65 8.14 -2.38 -0.02 -0.67 16 40 H 0.09 -0.94 7.84 -2.39 -0.02 -0.96 16 41 H 0.09 -0.99 8.14 -2.38 -0.02 -1.01 16 42 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 43 H 0.06 0.06 8.14 -2.38 -0.02 0.04 16 44 H 0.41 -3.63 7.60 -92.70 -0.70 -4.33 16 45 H 0.14 0.68 8.06 -2.91 -0.02 0.65 16 46 H 0.17 -0.99 6.19 -2.91 -0.02 -1.01 16 47 H 0.12 -0.64 7.96 -2.39 -0.02 -0.66 16 48 H 0.40 -4.86 8.70 -74.06 -0.64 -5.50 16 49 H -0.29 -0.07 7.11 99.48 0.71 0.63 16 50 H -0.29 -0.43 7.11 99.48 0.71 0.27 16 51 H 0.43 -3.69 8.19 -92.71 -0.76 -4.45 16 52 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 53 H 0.10 -0.47 7.90 -2.39 -0.02 -0.49 16 Total: 0.00 -26.74 429.96 -2.78 -29.52 By element: Atomic # 1 Polarization: -19.52 SS G_CDS: -1.93 Total: -21.45 kcal Atomic # 6 Polarization: 9.65 SS G_CDS: 6.03 Total: 15.68 kcal Atomic # 7 Polarization: 3.23 SS G_CDS: -6.67 Total: -3.44 kcal Atomic # 8 Polarization: -15.57 SS G_CDS: -2.32 Total: -17.89 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.10 Total: -2.42 kcal Total: -26.74 -2.78 -29.52 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_6580494.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.458 kcal (2) G-P(sol) polarization free energy of solvation -26.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.520 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.978 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds