Wall clock time and date at job start Thu Mar 4 2021 12:31:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47384 * 2 1 4 4 C 1.53000 * 109.47116 * 239.99709 * 2 1 3 5 5 O 1.45201 * 109.47003 * 119.99605 * 2 1 3 6 6 C 1.34638 * 116.99631 * 60.00252 * 5 2 1 7 7 O 1.21507 * 120.00487 * 359.97438 * 6 5 2 8 8 N 1.34786 * 119.99920 * 180.02562 * 6 5 2 9 9 C 1.46498 * 119.99857 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.85335 * 23.79800 * 9 8 6 11 11 C 1.53780 * 113.61134 * 154.99978 * 9 8 6 12 12 C 1.53784 * 87.07944 * 139.97904 * 11 9 8 13 13 H 1.08999 * 113.61583 * 89.20165 * 12 11 9 14 14 C 1.53003 * 113.61328 * 220.01685 * 12 11 9 15 15 C 1.53000 * 109.47095 * 185.00105 * 14 12 11 16 16 N 1.46503 * 109.46978 * 180.02562 * 15 14 12 17 17 C 1.34770 * 119.99738 * 180.02562 * 16 15 14 18 18 O 1.21634 * 120.00291 * 359.97438 * 17 16 15 19 19 C 1.47191 * 119.99817 * 180.02562 * 17 16 15 20 20 C 1.36014 * 123.46276 * 0.02562 * 19 17 16 21 21 S 1.70444 * 110.81789 * 180.26810 * 20 19 17 22 22 C 1.75505 * 92.44576 * 359.65187 * 21 20 19 23 23 C 1.50699 * 124.71082 * 180.09613 * 22 21 20 24 24 O 1.42903 * 109.47229 * 120.29217 * 23 22 21 25 25 Si 1.86299 * 109.47455 * 0.28829 * 23 22 21 26 26 C 1.32766 * 110.57315 * 0.35074 * 22 21 20 27 27 C 1.53775 * 87.08290 * 334.56621 * 12 11 9 28 28 H 1.09003 * 109.46940 * 300.00479 * 1 2 3 29 29 H 1.09000 * 109.46952 * 60.00337 * 1 2 3 30 30 H 1.08997 * 109.47280 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.47646 * 180.02562 * 3 2 1 32 32 H 1.09004 * 109.47082 * 300.00163 * 3 2 1 33 33 H 1.08996 * 109.47502 * 59.99420 * 3 2 1 34 34 H 1.08997 * 109.47131 * 300.00196 * 4 2 1 35 35 H 1.09000 * 109.47248 * 60.00135 * 4 2 1 36 36 H 1.09004 * 109.47295 * 180.02562 * 4 2 1 37 37 H 0.96999 * 119.99515 * 0.02562 * 8 6 5 38 38 H 1.09000 * 113.61368 * 25.42816 * 11 9 8 39 39 H 1.09005 * 113.61407 * 254.52629 * 11 9 8 40 40 H 1.08997 * 109.47175 * 64.99906 * 14 12 11 41 41 H 1.09001 * 109.46793 * 305.00463 * 14 12 11 42 42 H 1.09005 * 109.47116 * 60.00135 * 15 14 12 43 43 H 1.08998 * 109.47094 * 299.99882 * 15 14 12 44 44 H 0.97004 * 119.99641 * 0.02562 * 16 15 14 45 45 H 1.08002 * 124.58647 * 359.97438 * 20 19 17 46 46 H 1.09003 * 109.47000 * 240.28917 * 23 22 21 47 47 H 0.96694 * 113.99943 * 299.99889 * 24 23 22 48 48 H 1.48506 * 109.99600 * 58.68436 * 25 23 22 49 49 H 1.48497 * 110.00007 * 179.97438 * 25 23 22 50 50 H 1.08006 * 123.45324 * 179.72013 * 26 22 21 51 51 H 1.08996 * 113.61378 * 139.98416 * 27 12 11 52 52 H 1.09006 * 113.61338 * 270.88583 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3384 7 8 0.9509 -2.5094 0.5041 8 7 2.0671 -2.6654 2.4173 9 6 1.6730 -4.0665 2.5838 10 1 1.4207 -4.5503 1.6402 11 6 2.6459 -4.8809 3.4528 12 6 1.4080 -5.5534 4.0696 13 1 1.0830 -6.4452 3.5337 14 6 1.5194 -5.7752 5.5794 15 6 0.2996 -6.5569 6.0714 16 7 0.4060 -6.7687 7.5171 17 6 -0.5617 -7.4394 8.1728 18 8 -1.5236 -7.8685 7.5644 19 6 -0.4552 -7.6517 9.6254 20 6 0.5871 -7.2018 10.3747 21 16 0.3863 -7.6316 12.0118 22 6 -1.1438 -8.4299 11.6925 23 6 -1.9929 -9.1069 12.7373 24 8 -3.2787 -8.4851 12.7824 25 14 -1.1699 -8.9532 14.4016 26 6 -1.4465 -8.3591 10.4017 27 6 0.6265 -4.2848 3.6893 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.1301 1.4425 -0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6767 -1.7489 -1.2492 35 1 1.6767 -0.2075 -2.1392 36 1 3.1301 -0.7217 -1.2490 37 1 2.6261 -2.2362 3.0839 38 1 3.2115 -4.2747 4.1603 39 1 3.2747 -5.5638 2.8815 40 1 1.5616 -4.8110 6.0861 41 1 2.4255 -6.3403 5.7977 42 1 0.2575 -7.5211 5.5647 43 1 -0.6064 -5.9917 5.8530 44 1 1.1729 -6.4261 8.0023 45 1 1.4302 -6.6513 9.9842 46 1 -2.1078 -10.1611 12.4848 47 1 -3.2528 -7.5438 13.0020 48 1 -0.9787 -7.5207 14.7432 49 1 -1.9978 -9.6165 15.4407 50 1 -2.3421 -8.7870 9.9759 51 1 -0.3748 -4.4865 3.3090 52 1 0.6402 -3.5156 4.4615 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16659234_6894386.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:31:21 Heat of formation + Delta-G solvation = -101.410097 kcal Electronic energy + Delta-G solvation = -31694.314956 eV Core-core repulsion = 27173.710389 eV Total energy + Delta-G solvation = -4520.604568 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.165 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -41.90958 -41.06446 -40.33935 -38.91423 -38.04164 -37.21565 -36.37611 -35.38800 -34.29539 -32.35065 -30.96853 -28.40190 -28.32856 -27.01104 -26.80087 -26.58139 -25.04717 -23.67378 -22.24878 -21.99625 -21.39713 -20.63198 -20.27539 -19.12228 -19.01248 -18.12026 -17.79112 -17.68403 -17.20680 -16.81063 -16.77785 -16.51064 -16.34927 -16.11609 -15.69731 -15.57417 -15.43960 -15.15830 -15.01314 -14.53584 -14.40824 -14.07574 -13.90249 -13.73394 -13.57186 -13.51745 -13.39278 -13.37124 -13.18048 -12.94510 -12.89479 -12.85235 -12.64585 -12.62033 -12.42846 -12.38496 -12.29666 -11.89458 -11.85143 -11.58562 -11.42116 -11.23195 -11.12532 -11.02806 -10.76908 -10.25407 -10.13628 -9.96824 -9.43160 -5.05053 -0.33151 0.40371 0.70236 0.81892 1.17291 1.22815 1.56469 1.72034 1.91164 2.11775 2.26236 3.15100 3.29841 3.49127 3.50645 3.60023 3.71550 3.76171 3.82173 3.84039 3.91651 3.91897 3.97550 4.12952 4.27410 4.32295 4.35327 4.50011 4.51366 4.57970 4.62986 4.66566 4.71937 4.73198 4.76958 4.78162 4.82746 4.84860 4.88087 4.96386 4.98361 5.01719 5.04256 5.12478 5.17002 5.21844 5.23835 5.26549 5.33084 5.38103 5.55014 5.60730 6.39909 6.40289 6.46851 7.14991 7.33413 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.597 6.597 8 N -0.688 5.688 9 C 0.128 3.872 10 H 0.097 0.903 11 C -0.122 4.122 12 C -0.098 4.098 13 H 0.096 0.904 14 C -0.105 4.105 15 C 0.118 3.882 16 N -0.710 5.710 17 C 0.571 3.429 18 O -0.589 6.589 19 C -0.185 4.185 20 C -0.188 4.188 21 S 0.254 5.746 22 C -0.247 4.247 23 C -0.048 4.048 24 O -0.545 6.545 25 Si 0.733 3.267 26 C -0.078 4.078 27 C -0.150 4.150 28 H 0.061 0.939 29 H 0.086 0.914 30 H 0.061 0.939 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.062 0.938 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.418 0.582 38 H 0.110 0.890 39 H 0.084 0.916 40 H 0.087 0.913 41 H 0.092 0.908 42 H 0.057 0.943 43 H 0.052 0.948 44 H 0.416 0.584 45 H 0.207 0.793 46 H 0.129 0.871 47 H 0.388 0.612 48 H -0.251 1.251 49 H -0.277 1.277 50 H 0.129 0.871 51 H 0.057 0.943 52 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.349 3.484 4.885 11.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.488 6.488 8 N -0.347 5.347 9 C 0.025 3.975 10 H 0.115 0.885 11 C -0.160 4.160 12 C -0.118 4.118 13 H 0.114 0.886 14 C -0.143 4.143 15 C -0.005 4.005 16 N -0.362 5.362 17 C 0.358 3.642 18 O -0.471 6.471 19 C -0.203 4.203 20 C -0.326 4.326 21 S 0.521 5.479 22 C -0.364 4.364 23 C -0.159 4.159 24 O -0.354 6.354 25 Si 0.633 3.367 26 C -0.107 4.107 27 C -0.189 4.189 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.080 0.920 31 H 0.089 0.911 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.081 0.919 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.255 0.745 38 H 0.129 0.871 39 H 0.103 0.897 40 H 0.106 0.894 41 H 0.111 0.889 42 H 0.075 0.925 43 H 0.071 0.929 44 H 0.254 0.746 45 H 0.224 0.776 46 H 0.146 0.854 47 H 0.238 0.762 48 H -0.176 1.176 49 H -0.202 1.202 50 H 0.147 0.853 51 H 0.076 0.924 52 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 9.953 2.964 5.924 11.956 hybrid contribution -1.824 0.690 -1.671 2.568 sum 8.130 3.654 4.254 9.876 Atomic orbital electron populations 1.22475 0.94222 1.03584 1.03478 1.22336 0.94329 0.92648 0.81571 1.21889 1.02515 0.90804 1.04240 1.22475 1.01693 1.02193 0.97382 1.86310 1.71536 1.23362 1.47208 1.18496 0.78669 0.80784 0.82623 1.90902 1.42328 1.70977 1.44639 1.44805 1.54862 1.12313 1.22757 1.22661 0.97582 0.78514 0.98788 0.88460 1.23387 0.96284 0.98175 0.98182 1.22200 0.96740 0.97227 0.95613 0.88619 1.21677 0.96906 1.01262 0.94441 1.21419 0.99721 1.00170 0.79213 1.45714 1.24294 1.56596 1.09587 1.17968 0.82109 0.77407 0.86720 1.90798 1.33900 1.52446 1.69911 1.20103 0.98289 1.08258 0.93660 1.26204 1.02620 1.03665 1.00143 1.82923 1.13806 1.47637 1.03547 1.24834 1.02941 1.10010 0.98583 1.24764 0.85785 0.99535 1.05791 1.86611 1.27531 1.29139 1.92093 0.94472 0.86989 0.82048 0.73180 1.20975 0.99068 0.98436 0.92265 1.23640 0.98281 0.98499 0.98448 0.91980 0.89493 0.91958 0.91055 0.88370 0.91164 0.91913 0.89499 0.91816 0.74491 0.87145 0.89728 0.89418 0.88905 0.92452 0.92908 0.74606 0.77563 0.85361 0.76231 1.17558 1.20244 0.85295 0.92413 0.88565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.73 8.37 71.98 0.60 -0.13 16 2 C 0.13 0.43 1.13 -10.79 -0.01 0.41 16 3 C -0.14 0.27 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.67 8.37 71.98 0.60 -0.06 16 5 O -0.37 -2.07 9.94 -55.48 -0.55 -2.62 16 6 C 0.64 4.47 8.06 129.79 1.05 5.52 16 7 O -0.60 -7.75 11.48 19.82 0.23 -7.52 16 8 N -0.69 0.17 5.36 -567.59 -3.04 -2.87 16 9 C 0.13 -0.23 4.24 45.52 0.19 -0.04 16 10 H 0.10 0.29 7.46 -2.39 -0.02 0.27 16 11 C -0.12 1.00 7.39 31.12 0.23 1.23 16 12 C -0.10 0.68 3.65 -10.27 -0.04 0.64 16 13 H 0.10 -0.53 8.13 -2.39 -0.02 -0.55 16 14 C -0.11 0.97 5.17 30.60 0.16 1.13 16 15 C 0.12 -0.22 5.66 86.38 0.49 0.27 16 16 N -0.71 1.43 5.52 -466.59 -2.58 -1.14 16 17 C 0.57 3.78 7.79 86.60 0.67 4.46 16 18 O -0.59 -10.00 16.80 -4.14 -0.07 -10.07 16 19 C -0.19 -0.46 5.98 -19.87 -0.12 -0.58 16 20 C -0.19 1.07 10.38 67.30 0.70 1.76 16 21 S 0.25 -1.57 20.18 -56.49 -1.14 -2.71 16 22 C -0.25 0.05 5.68 24.51 0.14 0.19 16 23 C -0.05 0.03 2.95 71.24 0.21 0.24 16 24 O -0.55 -1.77 12.85 -148.98 -1.91 -3.68 16 25 Si 0.73 -2.79 30.91 68.60 2.12 -0.67 16 26 C -0.08 -0.39 9.91 22.67 0.22 -0.17 16 27 C -0.15 0.48 7.43 31.12 0.23 0.72 16 28 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 29 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 30 H 0.06 0.61 5.88 -2.39 -0.01 0.59 16 31 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 32 H 0.10 -0.50 8.14 -2.38 -0.02 -0.52 16 33 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 34 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 35 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 36 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 37 H 0.42 -2.31 8.84 -92.71 -0.82 -3.13 16 38 H 0.11 -1.30 8.08 -2.39 -0.02 -1.32 16 39 H 0.08 -0.69 8.14 -2.38 -0.02 -0.71 16 40 H 0.09 -1.00 7.84 -2.39 -0.02 -1.02 16 41 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 42 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 43 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 44 H 0.42 -4.09 6.97 -92.71 -0.65 -4.74 16 45 H 0.21 -2.86 7.01 -2.91 -0.02 -2.88 16 46 H 0.13 -0.20 7.96 -2.39 -0.02 -0.21 16 47 H 0.39 -1.16 8.70 -74.06 -0.64 -1.81 16 48 H -0.25 0.47 7.11 99.48 0.71 1.17 16 49 H -0.28 -0.91 7.11 99.48 0.71 -0.21 16 50 H 0.13 1.23 8.06 -2.91 -0.02 1.21 16 51 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 52 H 0.10 -0.46 7.90 -2.38 -0.02 -0.48 16 Total: 0.00 -27.39 434.68 -2.09 -29.49 By element: Atomic # 1 Polarization: -13.58 SS G_CDS: -1.11 Total: -14.69 kcal Atomic # 6 Polarization: 10.53 SS G_CDS: 5.97 Total: 16.50 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -5.62 Total: -4.02 kcal Atomic # 8 Polarization: -21.59 SS G_CDS: -2.31 Total: -23.89 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: 2.12 Total: -0.67 kcal Atomic # 16 Polarization: -1.57 SS G_CDS: -1.14 Total: -2.71 kcal Total: -27.39 -2.09 -29.49 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16659234_6894386.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.924 kcal (2) G-P(sol) polarization free energy of solvation -27.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.318 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds