Wall clock time and date at job start Thu Mar 4 2021 13:20:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 N 1.28474 * 124.88839 * 2 1 4 4 C 1.31806 * 110.07486 * 180.15753 * 3 2 1 5 5 C 1.47715 * 126.51767 * 179.81792 * 4 3 2 6 6 O 1.21568 * 119.99895 * 179.68653 * 5 4 3 7 7 N 1.34773 * 119.99912 * 359.68549 * 5 4 3 8 8 C 1.46500 * 119.99955 * 180.02562 * 7 5 4 9 9 H 1.09000 * 109.47175 * 325.00036 * 8 7 5 10 10 C 1.52997 * 109.47204 * 85.00142 * 8 7 5 11 11 C 1.52999 * 109.47592 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.46626 * 300.00035 * 11 10 8 13 13 H 1.09000 * 109.47050 * 299.99699 * 12 11 10 14 14 C 1.47203 * 109.46868 * 179.97438 * 12 11 10 15 15 N 9.68082 * 158.65992 * 165.68208 * 3 1 2 16 16 C 1.52997 * 109.47164 * 59.99702 * 12 11 10 17 17 C 1.52996 * 109.46993 * 205.00166 * 8 7 5 18 18 C 1.41502 * 106.96255 * 359.55387 * 4 3 2 19 19 C 1.35042 * 124.88600 * 179.65501 * 2 1 3 20 20 C 1.50696 * 126.37968 * 0.02562 * 19 2 1 21 21 O 1.42902 * 109.47626 * 329.99652 * 20 19 2 22 22 Si 1.86305 * 109.46735 * 210.00024 * 20 19 2 23 23 H 1.09001 * 109.47614 * 270.34648 * 1 2 3 24 24 H 1.09008 * 109.46826 * 30.34249 * 1 2 3 25 25 H 1.08997 * 109.47291 * 150.33673 * 1 2 3 26 26 H 0.97001 * 120.00163 * 0.02562 * 7 5 4 27 27 H 1.09000 * 109.47140 * 59.99873 * 10 8 7 28 28 H 1.09002 * 109.47045 * 299.99966 * 10 8 7 29 29 H 1.08993 * 109.47839 * 180.02562 * 11 10 8 30 30 H 1.09000 * 109.47160 * 59.99666 * 11 10 8 31 31 H 1.09000 * 109.47140 * 60.00051 * 16 12 11 32 32 H 1.09001 * 109.47230 * 179.97438 * 16 12 11 33 33 H 1.08992 * 109.47534 * 60.00265 * 17 8 7 34 34 H 1.08996 * 109.47134 * 299.99460 * 17 8 7 35 35 H 1.07999 * 127.24666 * 180.26390 * 18 4 3 36 36 H 1.08995 * 109.47315 * 90.00485 * 20 19 2 37 37 H 0.96695 * 114.00224 * 300.00434 * 21 20 19 38 38 H 1.48499 * 110.00133 * 58.68269 * 22 20 19 39 39 H 1.48504 * 109.99883 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7168 -0.0034 5 6 4.6273 1.6398 -0.0083 6 8 5.7597 1.1976 -0.0054 7 7 4.4242 2.9721 -0.0161 8 6 5.5680 3.8875 -0.0216 9 1 6.3777 3.4607 0.5703 10 6 6.0446 4.0996 -1.4598 11 6 7.2395 5.0550 -1.4656 12 6 6.8214 6.3981 -0.8635 13 1 6.0118 6.8252 -1.4553 14 6 7.9712 7.3172 -0.8684 15 7 8.8571 8.0280 -0.8712 16 6 6.3448 6.1860 0.5748 17 6 5.1493 5.2303 0.5803 18 6 3.5271 -0.6972 0.0048 19 6 2.2373 -1.1077 0.0067 20 6 1.7533 -2.5348 0.0147 21 8 0.4951 -2.6074 0.6884 22 14 2.9941 -3.6063 0.8996 23 1 -0.3634 0.0062 1.0276 24 1 -0.3633 0.8870 -0.5192 25 1 -0.3634 -0.8929 -0.5086 26 1 3.5206 3.3249 -0.0181 27 1 5.2349 4.5264 -2.0517 28 1 6.3428 3.1428 -1.8886 29 1 7.5788 5.2065 -2.4902 30 1 8.0491 4.6279 -0.8738 31 1 7.1544 5.7588 1.1666 32 1 6.0474 7.1428 1.0039 33 1 4.8098 5.0793 1.6049 34 1 4.3397 5.6571 -0.0116 35 1 4.4107 -1.3181 0.0087 36 1 1.6370 -2.8849 -1.0109 37 1 0.5238 -2.3107 1.6082 38 1 3.1854 -3.1200 2.2896 39 1 2.5288 -5.0165 0.9139 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16662488_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:59 Heat of formation + Delta-G solvation = 31.017675 kcal Electronic energy + Delta-G solvation = -22781.881953 eV Core-core repulsion = 19306.530677 eV Total energy + Delta-G solvation = -3475.351277 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.137 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.79610 -40.95296 -39.43034 -38.14460 -37.32055 -35.17715 -34.34790 -32.65273 -31.78905 -30.91973 -28.41558 -26.76769 -25.06356 -23.73928 -23.33712 -22.10213 -21.27077 -20.68226 -19.15476 -18.69307 -17.62513 -17.49856 -17.34483 -16.97803 -16.20052 -15.88551 -15.67657 -15.52725 -15.30761 -15.04377 -14.79611 -14.74780 -14.48297 -14.07130 -13.89414 -13.68908 -13.59694 -13.36552 -13.22815 -13.00449 -12.66912 -12.32093 -12.25190 -12.12332 -12.06034 -11.97581 -11.42481 -11.28571 -11.13654 -11.04093 -10.23449 -9.93857 -9.92908 -4.87634 0.49724 0.85819 1.25581 1.57426 1.69042 1.75798 1.79419 1.96183 2.17152 2.37491 2.95102 3.12030 3.36650 3.38737 3.70370 3.76552 4.03174 4.05618 4.24159 4.25637 4.32837 4.39495 4.42191 4.44076 4.48299 4.54133 4.55342 4.68493 4.72114 4.75045 4.88397 5.07183 5.15087 5.20337 5.22094 5.30256 5.37119 5.39421 5.57600 5.71047 6.29721 6.47496 6.58914 6.87236 7.20953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.266 5.266 3 N -0.263 5.263 4 C -0.039 4.039 5 C 0.604 3.396 6 O -0.565 6.565 7 N -0.702 5.702 8 C 0.139 3.861 9 H 0.073 0.927 10 C -0.121 4.121 11 C -0.105 4.105 12 C 0.012 3.988 13 H 0.148 0.852 14 C 0.237 3.763 15 N -0.503 5.503 16 C -0.105 4.105 17 C -0.114 4.114 18 C -0.189 4.189 19 C -0.014 4.014 20 C -0.043 4.043 21 O -0.538 6.538 22 Si 0.781 3.219 23 H 0.099 0.901 24 H 0.102 0.898 25 H 0.115 0.885 26 H 0.415 0.585 27 H 0.090 0.910 28 H 0.056 0.944 29 H 0.081 0.919 30 H 0.065 0.935 31 H 0.068 0.932 32 H 0.091 0.909 33 H 0.081 0.919 34 H 0.098 0.902 35 H 0.180 0.820 36 H 0.145 0.855 37 H 0.388 0.612 38 H -0.294 1.294 39 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.324 -2.163 -0.644 8.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.055 5.055 3 N -0.101 5.101 4 C -0.197 4.197 5 C 0.389 3.611 6 O -0.442 6.442 7 N -0.353 5.353 8 C 0.035 3.965 9 H 0.091 0.909 10 C -0.159 4.159 11 C -0.144 4.144 12 C -0.009 4.009 13 H 0.166 0.834 14 C -0.080 4.080 15 N -0.180 5.180 16 C -0.144 4.144 17 C -0.152 4.152 18 C -0.217 4.217 19 C -0.139 4.139 20 C -0.154 4.154 21 O -0.345 6.345 22 Si 0.684 3.316 23 H 0.117 0.883 24 H 0.121 0.879 25 H 0.133 0.867 26 H 0.252 0.748 27 H 0.108 0.892 28 H 0.075 0.925 29 H 0.100 0.900 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.109 0.891 33 H 0.100 0.900 34 H 0.117 0.883 35 H 0.197 0.803 36 H 0.163 0.837 37 H 0.238 0.762 38 H -0.221 1.221 39 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -7.084 -1.202 -0.549 7.206 hybrid contribution -0.791 -0.307 0.746 1.130 sum -7.875 -1.509 0.197 8.021 Atomic orbital electron populations 1.22595 0.70811 1.06713 1.05957 1.45685 1.08958 1.01933 1.48921 1.73455 1.02693 1.14619 1.19316 1.21881 0.90989 0.94475 1.12377 1.17014 0.86201 0.82318 0.75584 1.90795 1.23771 1.77787 1.51846 1.45836 1.11279 1.04518 1.73674 1.21183 0.88275 0.89854 0.97192 0.90860 1.21839 0.98324 0.99360 0.96409 1.21479 0.98402 0.92409 1.02153 1.19252 0.89926 0.91122 1.00572 0.83448 1.29840 0.94027 0.92811 0.91279 1.81297 1.13336 1.12716 1.10606 1.21510 0.98382 1.01103 0.93452 1.21741 0.98555 0.92213 1.02723 1.21720 0.97356 0.93716 1.08873 1.22145 0.91050 0.92041 1.08696 1.24814 0.93321 0.92173 1.05070 1.86580 1.29307 1.88392 1.30235 0.93243 0.84008 0.74796 0.79553 0.88257 0.87891 0.86682 0.74780 0.89174 0.92549 0.90025 0.91619 0.91339 0.89083 0.90009 0.88313 0.80280 0.83726 0.76211 1.22109 1.21214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.63 10.12 127.77 1.29 0.66 16 2 N -0.27 0.33 3.70 -355.94 -1.32 -0.99 16 3 N -0.26 -0.56 11.67 -48.17 -0.56 -1.12 16 4 C -0.04 -0.17 7.13 42.46 0.30 0.13 16 5 C 0.60 3.37 7.79 86.75 0.68 4.04 16 6 O -0.56 -6.83 16.59 -3.93 -0.07 -6.89 16 7 N -0.70 1.01 5.07 -445.55 -2.26 -1.25 16 8 C 0.14 -0.54 2.45 44.99 0.11 -0.43 16 9 H 0.07 0.06 7.58 -2.39 -0.02 0.04 16 10 C -0.12 0.59 5.49 30.59 0.17 0.76 16 11 C -0.11 0.59 5.16 30.60 0.16 0.75 16 12 C 0.01 -0.09 2.57 -12.60 -0.03 -0.12 16 13 H 0.15 -1.90 8.14 -2.39 -0.02 -1.92 16 14 C 0.24 0.42 14.64 89.45 1.31 1.73 16 15 N -0.50 -5.23 18.54 20.00 0.37 -4.86 16 16 C -0.11 0.90 5.16 30.61 0.16 1.06 16 17 C -0.11 1.10 5.39 30.61 0.17 1.26 16 18 C -0.19 -0.36 9.35 22.41 0.21 -0.15 16 19 C -0.01 0.02 6.18 41.40 0.26 0.28 16 20 C -0.04 0.24 2.88 71.23 0.20 0.44 16 21 O -0.54 2.96 10.40 -148.98 -1.55 1.41 16 22 Si 0.78 -3.29 31.23 68.60 2.14 -1.15 16 23 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 24 H 0.10 -0.98 8.14 -2.38 -0.02 -1.00 16 25 H 0.11 -1.06 6.77 -2.39 -0.02 -1.08 16 26 H 0.42 -2.09 8.33 -92.71 -0.77 -2.86 16 27 H 0.09 -0.75 8.14 -2.39 -0.02 -0.76 16 28 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 29 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 30 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 32 H 0.09 -0.90 8.14 -2.39 -0.02 -0.91 16 33 H 0.08 -0.75 8.14 -2.39 -0.02 -0.77 16 34 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 35 H 0.18 -0.19 7.02 -2.91 -0.02 -0.21 16 36 H 0.15 -1.20 7.96 -2.39 -0.02 -1.21 16 37 H 0.39 -3.83 8.70 -74.06 -0.64 -4.47 16 38 H -0.29 -0.67 7.11 99.48 0.71 0.03 16 39 H -0.29 -0.52 7.11 99.48 0.71 0.19 16 Total: 0.00 -24.42 331.65 1.45 -22.97 By element: Atomic # 1 Polarization: -18.25 SS G_CDS: -0.29 Total: -18.54 kcal Atomic # 6 Polarization: 5.44 SS G_CDS: 4.98 Total: 10.42 kcal Atomic # 7 Polarization: -4.45 SS G_CDS: -3.77 Total: -8.21 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -1.61 Total: -5.48 kcal Atomic # 14 Polarization: -3.29 SS G_CDS: 2.14 Total: -1.15 kcal Total: -24.42 1.45 -22.97 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16662488_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.986 kcal (2) G-P(sol) polarization free energy of solvation -24.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.969 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds