Wall clock time and date at job start Thu Mar 4 2021 13:27:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 C 1.53003 * 109.46841 * 203.76887 * 3 2 1 5 5 H 1.09000 * 112.84964 * 316.19648 * 4 3 2 6 6 C 1.53776 * 113.61558 * 184.99898 * 4 3 2 7 7 C 1.53782 * 87.08407 * 220.02014 * 6 4 3 8 8 H 1.08997 * 113.60908 * 270.79808 * 7 6 4 9 9 N 1.46502 * 113.61513 * 139.98160 * 7 6 4 10 10 C 1.34772 * 120.00016 * 154.99969 * 9 7 6 11 11 O 1.21586 * 120.00114 * 0.02562 * 10 9 7 12 12 C 1.47574 * 119.99902 * 180.02562 * 10 9 7 13 13 C 1.36498 * 120.00719 * 180.02562 * 12 10 9 14 14 N 1.35947 * 120.50233 * 179.97438 * 13 12 10 15 15 C 1.37003 * 132.41122 * 180.02562 * 14 13 12 16 16 C 1.50701 * 126.43280 * 359.96514 * 15 14 13 17 17 O 1.42898 * 109.46798 * 29.99044 * 16 15 14 18 18 Si 1.86296 * 109.47605 * 149.99355 * 16 15 14 19 19 C 1.35014 * 107.14179 * 179.97438 * 15 14 13 20 20 N 1.33584 * 108.65222 * 0.02562 * 19 15 14 21 21 C 1.32414 * 109.22374 * 359.97438 * 20 19 15 22 22 C 1.41249 * 132.11297 * 180.02562 * 21 20 19 23 23 Br 1.89102 * 120.25307 * 359.95213 * 22 21 20 24 24 C 1.35699 * 119.49009 * 179.97438 * 22 21 20 25 25 C 1.53782 * 113.61260 * 87.50319 * 4 3 2 26 26 H 1.08994 * 109.47217 * 83.76810 * 3 2 1 27 27 H 1.09002 * 109.47191 * 323.76741 * 3 2 1 28 28 H 1.09003 * 113.61856 * 105.46746 * 6 4 3 29 29 H 1.09007 * 113.69115 * 334.58112 * 6 4 3 30 30 H 0.97006 * 119.99430 * 335.00258 * 9 7 6 31 31 H 1.07999 * 119.74919 * 359.97347 * 13 12 10 32 32 H 1.09006 * 109.46447 * 269.99658 * 16 15 14 33 33 H 0.96708 * 114.00012 * 180.02562 * 17 16 15 34 34 H 1.48500 * 110.00103 * 178.67671 * 18 16 15 35 35 H 1.48498 * 109.99956 * 300.00155 * 18 16 15 36 36 H 1.07997 * 125.66867 * 180.02562 * 19 15 14 37 37 H 1.07999 * 120.23431 * 180.02562 * 24 22 21 38 38 H 1.08996 * 113.61954 * 25.43259 * 25 4 3 39 39 H 1.09003 * 113.61654 * 254.52329 * 25 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1174 1.3211 0.5814 5 1 2.5746 2.1874 0.2033 6 6 4.6460 1.4747 0.5146 7 6 4.5657 2.1005 1.9170 8 1 4.4204 3.1807 1.9053 9 7 5.6496 1.6820 2.8094 10 6 6.0194 2.4718 3.8369 11 8 5.4533 3.5315 4.0236 12 6 7.1116 2.0504 4.7355 13 6 7.4860 2.8499 5.7765 14 7 8.4904 2.4714 6.6108 15 6 9.0545 3.0675 7.7078 16 6 8.6662 4.3964 8.3030 17 8 7.2773 4.6360 8.0678 18 14 8.9906 4.3739 10.1374 19 6 10.0238 2.2410 8.1554 20 7 10.0657 1.1645 7.3656 21 6 9.1450 1.2806 6.4211 22 6 8.7749 0.4371 5.3503 23 35 9.6706 -1.2060 5.0783 24 6 7.7721 0.8151 4.5179 25 6 3.2648 1.3040 2.1121 26 1 2.9714 -0.1107 -1.0215 27 1 2.9718 -0.8281 0.6074 28 1 4.9819 2.1695 -0.2551 29 1 5.1809 0.5252 0.4901 30 1 6.1010 0.8363 2.6606 31 1 6.9804 3.7904 5.9387 32 1 9.2551 5.1880 7.8395 33 1 6.9572 5.4761 8.4243 34 1 8.6418 5.6896 10.7311 35 1 8.1937 3.2988 10.7809 36 1 10.6594 2.4205 9.0099 37 1 7.4791 0.1793 3.6956 38 1 3.4208 0.3073 2.5247 39 1 2.4856 1.8612 2.6321 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16663504_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:27:28 Heat of formation + Delta-G solvation = 84.936094 kcal Electronic energy + Delta-G solvation = -26735.546412 eV Core-core repulsion = 22693.574408 eV Total energy + Delta-G solvation = -4041.972004 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.032 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -44.22018 -41.44141 -39.89218 -38.42106 -38.01067 -37.46315 -35.49602 -34.80188 -32.60531 -31.91441 -30.91052 -30.21815 -26.89339 -26.59074 -26.10475 -24.04744 -23.83191 -22.43706 -21.77957 -20.68639 -19.16064 -18.87928 -18.75914 -18.34075 -17.84543 -17.43448 -17.17091 -16.31077 -16.28028 -16.19754 -16.00291 -15.62126 -15.49612 -15.26364 -14.92617 -14.56988 -14.46933 -14.12577 -13.86867 -13.61365 -13.39421 -13.30706 -13.28263 -13.00095 -12.90362 -12.83566 -12.52268 -12.16445 -12.03280 -11.55919 -11.52611 -11.42622 -11.33197 -11.27367 -11.15052 -10.89874 -10.17961 -9.93977 -9.02680 -4.94990 -0.87296 -0.34623 0.22117 0.96639 1.20624 1.41227 1.63905 1.81044 1.82326 1.89697 1.97871 2.06599 2.25066 2.80293 2.96974 3.10999 3.20596 3.42378 3.43889 3.53742 3.58006 3.73695 3.89391 3.96888 3.97208 4.15812 4.30424 4.34305 4.40643 4.48798 4.52855 4.60434 4.82489 4.89163 4.93707 4.98852 5.00592 5.09299 5.21929 5.29557 5.32771 5.58687 5.63546 6.37810 6.41107 6.49758 6.69642 7.03140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.521 5.521 2 C 0.233 3.767 3 C -0.011 4.011 4 C -0.100 4.100 5 H 0.093 0.907 6 C -0.116 4.116 7 C 0.111 3.889 8 H 0.096 0.904 9 N -0.692 5.692 10 C 0.578 3.422 11 O -0.572 6.572 12 C -0.173 4.173 13 C 0.161 3.839 14 N -0.360 5.360 15 C -0.054 4.054 16 C -0.055 4.055 17 O -0.565 6.565 18 Si 0.808 3.192 19 C 0.041 3.959 20 N -0.491 5.491 21 C 0.221 3.779 22 C -0.082 4.082 23 Br 0.009 6.991 24 C -0.022 4.022 25 C -0.155 4.155 26 H 0.146 0.854 27 H 0.141 0.859 28 H 0.089 0.911 29 H 0.126 0.874 30 H 0.419 0.581 31 H 0.184 0.816 32 H 0.109 0.891 33 H 0.406 0.594 34 H -0.272 1.272 35 H -0.308 1.308 36 H 0.229 0.771 37 H 0.192 0.808 38 H 0.108 0.892 39 H 0.049 0.951 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.794 0.269 -2.525 7.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.199 5.199 2 C -0.083 4.083 3 C -0.051 4.051 4 C -0.121 4.121 5 H 0.111 0.889 6 C -0.153 4.153 7 C 0.006 3.994 8 H 0.114 0.886 9 N -0.343 5.343 10 C 0.364 3.636 11 O -0.452 6.452 12 C -0.181 4.181 13 C 0.034 3.966 14 N -0.033 5.033 15 C -0.164 4.164 16 C -0.162 4.162 17 O -0.377 6.377 18 Si 0.710 3.290 19 C -0.108 4.108 20 N -0.210 5.210 21 C -0.024 4.024 22 C -0.165 4.165 23 Br 0.094 6.906 24 C -0.048 4.048 25 C -0.194 4.194 26 H 0.163 0.837 27 H 0.159 0.841 28 H 0.108 0.892 29 H 0.145 0.855 30 H 0.258 0.742 31 H 0.201 0.799 32 H 0.127 0.873 33 H 0.258 0.742 34 H -0.198 1.198 35 H -0.236 1.236 36 H 0.246 0.754 37 H 0.209 0.791 38 H 0.126 0.874 39 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges 5.307 -0.699 -1.858 5.666 hybrid contribution -1.560 1.581 -0.109 2.224 sum 3.746 0.882 -1.967 4.322 Atomic orbital electron populations 1.81324 1.16026 1.10947 1.11627 1.30186 0.96241 0.91061 0.90835 1.19713 0.78095 0.99946 1.07336 1.22241 0.97388 0.97378 0.95049 0.88911 1.23386 0.94295 1.03426 0.94237 1.22656 0.86104 0.99918 0.90685 0.88623 1.45700 1.37129 1.23366 1.28108 1.17602 0.81460 0.83665 0.80847 1.90833 1.56457 1.24753 1.73158 1.19326 1.02267 0.97148 0.99361 1.22175 0.86651 1.00157 0.87581 1.42717 1.23735 1.16497 1.20326 1.21440 1.02489 1.00180 0.92330 1.24781 0.84903 0.92810 1.13740 1.86442 1.23612 1.46309 1.81325 0.93608 0.89410 0.77384 0.68585 1.22966 0.98317 0.88542 1.01009 1.70837 1.19941 1.24960 1.05296 1.20774 0.94960 0.87362 0.99296 1.20601 1.02186 0.96105 0.97573 1.96832 1.77230 1.20910 1.95606 1.21387 0.91069 0.94287 0.98035 1.23719 0.96965 1.02013 0.96698 0.83664 0.84146 0.89193 0.85542 0.74179 0.79882 0.87332 0.74178 1.19807 1.23572 0.75436 0.79072 0.87351 0.93168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.79 18.54 20.01 0.37 -4.42 16 2 C 0.23 -0.26 15.42 89.44 1.38 1.12 16 3 C -0.01 0.16 5.54 28.79 0.16 0.32 16 4 C -0.10 1.19 3.62 -10.27 -0.04 1.15 16 5 H 0.09 -0.84 8.12 -2.39 -0.02 -0.86 16 6 C -0.12 1.72 7.39 31.12 0.23 1.95 16 7 C 0.11 -0.83 4.24 45.52 0.19 -0.63 16 8 H 0.10 -0.18 7.46 -2.39 -0.02 -0.20 16 9 N -0.69 5.11 5.31 -443.16 -2.35 2.76 16 10 C 0.58 0.50 7.76 86.71 0.67 1.18 16 11 O -0.57 -5.38 15.87 -3.99 -0.06 -5.44 16 12 C -0.17 -0.07 5.84 -20.35 -0.12 -0.19 16 13 C 0.16 0.68 9.91 83.65 0.83 1.51 16 14 N -0.36 -2.03 2.93 -337.71 -0.99 -3.02 16 15 C -0.05 -0.15 6.28 41.01 0.26 0.11 16 16 C -0.05 0.17 3.05 71.24 0.22 0.38 16 17 O -0.57 0.31 10.88 -148.98 -1.62 -1.31 16 18 Si 0.81 -4.22 31.18 68.60 2.14 -2.08 16 19 C 0.04 0.09 10.44 83.68 0.87 0.96 16 20 N -0.49 -3.98 11.30 -194.11 -2.19 -6.17 16 21 C 0.22 1.54 7.59 134.19 1.02 2.56 16 22 C -0.08 -0.20 6.24 22.42 0.14 -0.06 16 23 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 24 C -0.02 0.07 9.26 22.55 0.21 0.28 16 25 C -0.16 1.24 7.43 31.12 0.23 1.47 16 26 H 0.15 -2.76 8.14 -2.39 -0.02 -2.78 16 27 H 0.14 -2.65 7.84 -2.39 -0.02 -2.67 16 28 H 0.09 -1.31 8.14 -2.39 -0.02 -1.33 16 29 H 0.13 -2.59 8.08 -2.38 -0.02 -2.61 16 30 H 0.42 -6.08 6.76 -92.70 -0.63 -6.70 16 31 H 0.18 0.94 6.19 -2.91 -0.02 0.92 16 32 H 0.11 -0.83 7.96 -2.38 -0.02 -0.85 16 33 H 0.41 -3.55 8.74 -74.05 -0.65 -4.20 16 34 H -0.27 0.57 7.11 99.48 0.71 1.28 16 35 H -0.31 -1.40 7.11 99.48 0.71 -0.69 16 36 H 0.23 -1.57 6.90 -2.91 -0.02 -1.59 16 37 H 0.19 -2.35 6.44 -2.91 -0.02 -2.36 16 38 H 0.11 -1.21 7.90 -2.39 -0.02 -1.23 16 39 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 Total: 0.00 -35.01 360.76 0.77 -34.25 By element: Atomic # 1 Polarization: -25.92 SS G_CDS: -0.09 Total: -26.00 kcal Atomic # 6 Polarization: 5.86 SS G_CDS: 6.25 Total: 12.11 kcal Atomic # 7 Polarization: -5.69 SS G_CDS: -5.17 Total: -10.86 kcal Atomic # 8 Polarization: -5.06 SS G_CDS: -1.68 Total: -6.75 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.14 Total: -2.08 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -35.01 0.77 -34.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16663504_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.182 kcal (2) G-P(sol) polarization free energy of solvation -35.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.768 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.246 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds