Wall clock time and date at job start Thu Mar 4 2021 16:56:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34231 * 117.00089 * 2 1 4 4 O 1.20829 * 120.00085 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00026 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84832 * 48.80474 * 5 3 2 7 7 C 1.53783 * 113.61557 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.08025 * 140.06778 * 7 5 3 9 9 H 1.09000 * 113.61633 * 219.94250 * 8 7 5 10 10 N 1.46497 * 113.61303 * 89.11696 * 8 7 5 11 11 C 1.35311 * 125.87044 * 275.28862 * 10 8 7 12 12 C 1.35347 * 106.17683 * 180.18728 * 11 10 8 13 13 C 1.50703 * 126.75531 * 179.85683 * 12 11 10 14 14 N 1.46499 * 109.47138 * 94.71428 * 13 12 11 15 15 C 1.34777 * 119.99665 * 180.28062 * 14 13 12 16 16 O 1.21573 * 120.00276 * 359.72080 * 15 14 13 17 17 C 1.47716 * 119.99706 * 179.72381 * 15 14 13 18 18 N 1.31806 * 126.51527 * 359.68970 * 17 15 14 19 19 N 1.28474 * 110.06914 * 179.82052 * 18 17 15 20 20 C 1.46496 * 124.88527 * 180.16063 * 19 18 17 21 21 C 1.35033 * 110.22731 * 0.45000 * 19 18 17 22 22 C 1.50708 * 126.38334 * 179.74620 * 21 19 18 23 23 O 1.42904 * 109.46950 * 30.00243 * 22 21 19 24 24 Si 1.86294 * 109.46892 * 149.99889 * 22 21 19 25 25 C 1.35357 * 107.23150 * 359.72900 * 21 19 18 26 26 N 1.33770 * 106.49547 * 359.59719 * 12 11 10 27 27 N 1.28630 * 108.88706 * 0.26150 * 26 12 11 28 28 C 1.53778 * 113.69157 * 277.53614 * 5 3 2 29 29 H 1.09003 * 109.47037 * 60.00000 * 1 2 3 30 30 H 1.09000 * 109.47316 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.46929 * 300.00141 * 1 2 3 32 32 H 1.09001 * 113.61063 * 25.51786 * 7 5 3 33 33 H 1.08990 * 113.61507 * 254.61798 * 7 5 3 34 34 H 1.08007 * 126.91124 * 0.05138 * 11 10 8 35 35 H 1.09009 * 109.46601 * 334.71331 * 13 12 11 36 36 H 1.08998 * 109.47035 * 214.71839 * 13 12 11 37 37 H 0.97001 * 119.99790 * 359.97438 * 14 13 12 38 38 H 1.09004 * 109.47289 * 270.33658 * 20 19 18 39 39 H 1.09008 * 109.47383 * 30.33107 * 20 19 18 40 40 H 1.08999 * 109.47352 * 150.33567 * 20 19 18 41 41 H 1.08995 * 109.47238 * 270.00362 * 22 21 19 42 42 H 0.96691 * 114.00311 * 179.97438 * 23 22 21 43 43 H 1.48492 * 110.00624 * 300.00503 * 24 22 21 44 44 H 1.48503 * 110.00095 * 61.32709 * 24 22 21 45 45 H 1.08003 * 127.24885 * 179.97438 * 25 21 19 46 46 H 1.09007 * 113.61407 * 105.46282 * 28 5 3 47 47 H 1.08994 * 113.61579 * 334.55581 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0239 0.6362 -0.7550 7 6 4.1078 2.7142 -0.0001 8 6 5.1821 2.2269 0.9865 9 1 5.3989 2.9389 1.7827 10 7 6.3907 1.7178 0.3336 11 6 6.5703 0.4603 -0.1325 12 6 7.8206 0.4249 -0.6497 13 6 8.4981 -0.7588 -1.2908 14 7 8.3139 -0.6995 -2.7429 15 6 8.8328 -1.6643 -3.5280 16 8 9.4580 -2.5812 -3.0315 17 6 8.6418 -1.6077 -4.9917 18 7 7.9856 -0.6816 -5.6618 19 7 8.0200 -0.9400 -6.9198 20 6 7.3966 -0.1195 -7.9610 21 6 8.7081 -2.0801 -7.1435 22 6 8.9659 -2.7204 -8.4833 23 8 9.0252 -1.7090 -9.4910 24 14 10.5852 -3.6401 -8.4306 25 6 9.1235 -2.5405 -5.9403 26 7 8.3346 1.6488 -0.4850 27 7 7.4626 2.3913 0.1006 28 6 4.1925 1.1230 1.3969 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 3.4177 3.4405 0.4294 33 1 4.5099 3.0289 -0.9630 34 1 5.8598 -0.3524 -0.0968 35 1 8.0603 -1.6801 -0.9063 36 1 9.5628 -0.7379 -1.0584 37 1 7.8147 0.0319 -3.1390 38 1 6.3738 -0.4580 -8.1266 39 1 7.3873 0.9236 -7.6447 40 1 7.9648 -0.2135 -8.8865 41 1 8.1599 -3.4167 -8.7143 42 1 9.1892 -2.0496 -10.3810 43 1 11.6924 -2.7018 -8.1164 44 1 10.5254 -4.7156 -7.4084 45 1 9.7006 -3.4324 -5.7454 46 1 4.6631 0.1536 1.5613 47 1 3.5257 1.4141 2.2084 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16723000_13259642.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:56:20 Heat of formation + Delta-G solvation = 70.068169 kcal Electronic energy + Delta-G solvation = -33767.935620 eV Core-core repulsion = 28958.533974 eV Total energy + Delta-G solvation = -4809.401645 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.158 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -44.58872 -43.95433 -41.95432 -40.62144 -39.83074 -37.92652 -37.54741 -36.43185 -34.57023 -34.11114 -33.01064 -32.40145 -29.69825 -29.11271 -27.88698 -27.45307 -27.03648 -26.52724 -24.40806 -24.23949 -22.62241 -22.30859 -22.23586 -21.03595 -20.68181 -19.15557 -18.77844 -18.44595 -18.11257 -17.87665 -17.75570 -17.57014 -17.44555 -17.37836 -16.82098 -16.39710 -15.99510 -15.88265 -15.70218 -15.40923 -15.21533 -15.16249 -14.83180 -14.58203 -14.30463 -14.04967 -13.99537 -13.86716 -13.68077 -13.61719 -13.45852 -13.37723 -12.98060 -12.94519 -12.76479 -12.29172 -12.15057 -12.05867 -12.04405 -11.90736 -11.88031 -11.64603 -11.53769 -11.13739 -10.90263 -10.47792 -10.45255 -10.16296 -9.94957 -5.00277 0.30655 0.40523 0.67180 0.97885 1.06407 1.15063 1.21673 1.56973 1.62912 1.69386 2.07575 2.14342 2.19566 2.71429 2.99677 3.01734 3.10288 3.16108 3.24214 3.49099 3.57982 3.62080 3.89708 3.92647 3.96313 4.10954 4.15442 4.21382 4.23613 4.26939 4.29365 4.36667 4.38044 4.43031 4.45221 4.48217 4.53579 4.57146 4.67240 4.68414 4.79112 4.83099 4.84980 4.91868 5.05817 5.14011 5.28315 5.51251 5.57780 6.20433 6.57473 6.66675 6.84117 6.94372 7.32601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.473 3.527 4 O -0.535 6.535 5 C -0.116 4.116 6 H 0.143 0.857 7 C -0.119 4.119 8 C 0.109 3.891 9 H 0.148 0.852 10 N -0.267 5.267 11 C -0.007 4.007 12 C -0.054 4.054 13 C 0.212 3.788 14 N -0.701 5.701 15 C 0.608 3.392 16 O -0.563 6.563 17 C -0.035 4.035 18 N -0.265 5.265 19 N -0.258 5.258 20 C 0.068 3.932 21 C 0.028 3.972 22 C -0.043 4.043 23 O -0.558 6.558 24 Si 0.812 3.188 25 C -0.215 4.215 26 N -0.288 5.288 27 N -0.105 5.105 28 C -0.105 4.105 29 H 0.059 0.941 30 H 0.128 0.872 31 H 0.064 0.936 32 H 0.124 0.876 33 H 0.080 0.920 34 H 0.234 0.766 35 H 0.112 0.888 36 H 0.076 0.924 37 H 0.412 0.588 38 H 0.100 0.900 39 H 0.096 0.904 40 H 0.137 0.863 41 H 0.120 0.880 42 H 0.415 0.585 43 H -0.313 1.313 44 H -0.291 1.291 45 H 0.158 0.842 46 H 0.119 0.881 47 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.535 -4.238 -5.611 10.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.276 6.276 3 C 0.317 3.683 4 O -0.424 6.424 5 C -0.134 4.134 6 H 0.160 0.840 7 C -0.157 4.157 8 C 0.008 3.992 9 H 0.165 0.835 10 N -0.059 5.059 11 C -0.159 4.159 12 C -0.192 4.192 13 C 0.087 3.913 14 N -0.353 5.353 15 C 0.394 3.606 16 O -0.440 6.440 17 C -0.193 4.193 18 N -0.103 5.103 19 N -0.047 5.047 20 C -0.069 4.069 21 C -0.097 4.097 22 C -0.153 4.153 23 O -0.371 6.371 24 Si 0.717 3.283 25 C -0.243 4.243 26 N -0.155 5.155 27 N -0.083 5.083 28 C -0.143 4.143 29 H 0.077 0.923 30 H 0.146 0.854 31 H 0.083 0.917 32 H 0.142 0.858 33 H 0.099 0.901 34 H 0.250 0.750 35 H 0.130 0.870 36 H 0.094 0.906 37 H 0.248 0.752 38 H 0.119 0.881 39 H 0.114 0.886 40 H 0.155 0.845 41 H 0.137 0.863 42 H 0.270 0.730 43 H -0.241 1.241 44 H -0.218 1.218 45 H 0.176 0.824 46 H 0.138 0.862 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -6.750 -1.958 -4.061 8.117 hybrid contribution -0.887 -0.634 0.150 1.101 sum -7.636 -2.593 -3.912 8.963 Atomic orbital electron populations 1.23539 0.74922 1.05648 1.02507 1.86511 1.24776 1.32899 1.83380 1.23795 0.92171 0.81146 0.71199 1.90700 1.67780 1.37446 1.46470 1.22842 0.86848 1.00981 1.02766 0.83962 1.23363 0.95899 0.95778 1.00696 1.22756 0.79777 0.99894 0.96804 0.83468 1.47342 1.12602 1.08283 1.37678 1.23952 0.99556 0.90584 1.01810 1.21885 0.94631 0.95024 1.07707 1.19449 1.00521 0.93527 0.77762 1.45750 1.55673 1.26717 1.07130 1.16880 0.78306 0.81702 0.83753 1.90794 1.42491 1.35925 1.74828 1.21747 1.06098 0.96789 0.94683 1.73471 1.20672 1.24220 0.91966 1.45791 1.36325 1.17999 1.04575 1.22906 1.00293 0.95025 0.88714 1.21467 1.00110 0.91165 0.96980 1.24412 1.13287 0.94484 0.83149 1.86209 1.95681 1.33979 1.21217 0.94588 0.71567 0.75787 0.86322 1.21530 1.08173 1.03651 0.90914 1.75124 1.23394 1.02997 1.13988 1.78373 0.91564 1.21230 1.17163 1.23398 0.95485 1.00171 0.95236 0.92259 0.85396 0.91720 0.85750 0.90099 0.74955 0.87000 0.90616 0.75205 0.88109 0.88551 0.84506 0.86290 0.72980 1.24110 1.21804 0.82428 0.86248 0.84916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.11 10.56 113.37 1.20 1.08 16 2 O -0.36 0.58 10.57 -51.42 -0.54 0.04 16 3 C 0.47 -0.46 7.49 71.24 0.53 0.07 16 4 O -0.53 -3.10 15.65 21.95 0.34 -2.76 16 5 C -0.12 0.87 3.84 -11.01 -0.04 0.83 16 6 H 0.14 -1.45 6.95 -2.39 -0.02 -1.46 16 7 C -0.12 0.69 7.20 31.12 0.22 0.91 16 8 C 0.11 -0.79 5.11 45.53 0.23 -0.56 16 9 H 0.15 -1.33 8.14 -2.39 -0.02 -1.35 16 10 N -0.27 0.28 3.52 -324.61 -1.14 -0.87 16 11 C -0.01 0.02 9.61 83.49 0.80 0.83 16 12 C -0.05 -0.18 6.61 41.60 0.28 0.10 16 13 C 0.21 0.78 6.23 85.63 0.53 1.31 16 14 N -0.70 -4.48 5.55 -469.81 -2.61 -7.08 16 15 C 0.61 7.46 7.83 86.75 0.68 8.13 16 16 O -0.56 -10.11 16.93 -3.95 -0.07 -10.17 16 17 C -0.04 -0.41 7.13 42.46 0.30 -0.11 16 18 N -0.27 -2.43 11.67 -48.18 -0.56 -3.00 16 19 N -0.26 -1.32 3.70 -355.92 -1.32 -2.64 16 20 C 0.07 -0.22 11.00 127.77 1.41 1.19 16 21 C 0.03 0.14 6.21 41.40 0.26 0.40 16 22 C -0.04 0.20 2.98 71.24 0.21 0.41 16 23 O -0.56 4.64 9.77 -148.98 -1.45 3.18 16 24 Si 0.81 -2.81 31.31 68.60 2.15 -0.66 16 25 C -0.21 -2.19 9.35 22.41 0.21 -1.98 16 26 N -0.29 -2.96 12.41 -48.60 -0.60 -3.56 16 27 N -0.10 -0.82 13.17 37.02 0.49 -0.33 16 28 C -0.10 1.22 6.88 31.13 0.21 1.44 16 29 H 0.06 -0.17 8.13 -2.39 -0.02 -0.19 16 30 H 0.13 -1.19 8.14 -2.39 -0.02 -1.21 16 31 H 0.06 -0.26 8.13 -2.39 -0.02 -0.27 16 32 H 0.12 -0.62 7.44 -2.39 -0.02 -0.64 16 33 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 34 H 0.23 -2.92 6.73 -2.91 -0.02 -2.94 16 35 H 0.11 -0.05 8.14 -2.38 -0.02 -0.07 16 36 H 0.08 0.54 8.14 -2.39 -0.02 0.52 16 37 H 0.41 2.05 8.19 -92.71 -0.76 1.29 16 38 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 39 H 0.10 -0.38 8.14 -2.38 -0.02 -0.40 16 40 H 0.14 -0.76 5.19 -2.39 -0.01 -0.77 16 41 H 0.12 -1.21 7.96 -2.39 -0.02 -1.23 16 42 H 0.42 -7.93 8.74 -74.06 -0.65 -8.58 16 43 H -0.31 -2.18 7.11 99.48 0.71 -1.47 16 44 H -0.29 -0.96 6.94 99.48 0.69 -0.27 16 45 H 0.16 1.62 6.91 -2.91 -0.02 1.60 16 46 H 0.12 -1.77 6.99 -2.38 -0.02 -1.79 16 47 H 0.13 -1.77 8.10 -2.39 -0.02 -1.79 16 Total: 0.00 -37.19 402.77 1.40 -35.79 By element: Atomic # 1 Polarization: -21.67 SS G_CDS: -0.33 Total: -21.99 kcal Atomic # 6 Polarization: 7.01 SS G_CDS: 7.04 Total: 14.04 kcal Atomic # 7 Polarization: -11.73 SS G_CDS: -5.74 Total: -17.48 kcal Atomic # 8 Polarization: -7.99 SS G_CDS: -1.72 Total: -9.71 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.15 Total: -0.66 kcal Total: -37.19 1.40 -35.79 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16723000_13259642.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.859 kcal (2) G-P(sol) polarization free energy of solvation -37.187 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.791 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.068 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds