Wall clock time and date at job start Thu Mar 4 2021 13:46:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 N 1.28471 * 124.87991 * 2 1 4 4 C 1.31822 * 110.07322 * 180.02562 * 3 2 1 5 5 C 1.47678 * 126.52079 * 180.02562 * 4 3 2 6 6 O 1.21583 * 119.99875 * 180.02562 * 5 4 3 7 7 N 1.34778 * 120.00015 * 0.02562 * 5 4 3 8 8 C 1.39878 * 119.99653 * 175.32503 * 7 5 4 9 9 C 1.39257 * 120.49537 * 34.97322 * 8 7 5 10 10 C 1.38535 * 118.36103 * 179.97438 * 9 8 7 11 11 C 1.38228 * 119.24211 * 359.97438 * 10 9 8 12 12 Si 1.86803 * 119.53850 * 179.97438 * 11 10 9 13 13 C 1.86292 * 109.47028 * 90.00378 * 12 11 10 14 14 C 1.86303 * 109.47135 * 210.00393 * 12 11 10 15 15 C 1.86301 * 109.47169 * 330.00433 * 12 11 10 16 16 N 1.31886 * 120.92792 * 0.02986 * 11 10 9 17 17 C 1.31799 * 121.79214 * 359.67210 * 16 11 10 18 18 C 1.41513 * 106.95484 * 359.74342 * 4 3 2 19 19 C 1.35037 * 124.88715 * 179.97438 * 2 1 3 20 20 C 1.50694 * 126.38368 * 359.97438 * 19 2 1 21 21 O 1.42902 * 109.47169 * 30.00445 * 20 19 2 22 22 Si 1.86297 * 109.47191 * 150.00222 * 20 19 2 23 23 H 1.48499 * 109.46979 * 60.00180 * 22 20 19 24 24 H 1.48501 * 109.47307 * 180.02562 * 22 20 19 25 25 H 1.48501 * 109.47078 * 300.00246 * 22 20 19 26 26 H 1.09001 * 109.47318 * 269.99810 * 1 2 3 27 27 H 1.08998 * 109.47829 * 30.00539 * 1 2 3 28 28 H 1.09003 * 109.46888 * 150.00177 * 1 2 3 29 29 H 0.96998 * 119.99953 * 355.33837 * 7 5 4 30 30 H 1.08001 * 120.81507 * 359.97438 * 9 8 7 31 31 H 1.08001 * 120.37983 * 180.02562 * 10 9 8 32 32 H 1.09005 * 109.47100 * 60.00133 * 13 12 11 33 33 H 1.09002 * 109.47172 * 179.97438 * 13 12 11 34 34 H 1.08995 * 109.47435 * 299.99693 * 13 12 11 35 35 H 1.09001 * 109.46964 * 60.00121 * 14 12 11 36 36 H 1.08993 * 109.46928 * 179.97438 * 14 12 11 37 37 H 1.09001 * 109.46748 * 299.99996 * 14 12 11 38 38 H 1.08995 * 109.47359 * 59.99799 * 15 12 11 39 39 H 1.08995 * 109.47106 * 180.02562 * 15 12 11 40 40 H 1.09004 * 109.46949 * 299.99642 * 15 12 11 41 41 H 1.08000 * 119.66850 * 180.31421 * 17 16 11 42 42 H 1.08005 * 127.24166 * 180.26864 * 18 4 3 43 43 H 1.08998 * 109.47157 * 270.00207 * 20 19 2 44 44 H 0.96697 * 114.00104 * 59.99603 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1996 1.0539 0.0000 4 6 3.4741 0.7170 -0.0006 5 6 4.6270 1.6398 -0.0002 6 8 5.7596 1.1976 -0.0013 7 7 4.4238 2.9722 0.0013 8 6 5.5120 3.8455 0.1003 9 6 6.7296 3.5278 -0.4962 10 6 7.7777 4.4250 -0.3708 11 6 7.5826 5.5968 0.3359 12 14 8.9905 6.8121 0.5108 13 6 8.9471 8.0207 -0.9062 14 6 8.8178 7.7352 2.1198 15 6 10.6106 5.8924 0.4932 16 7 6.4168 5.8685 0.8895 17 6 5.3921 5.0456 0.7895 18 6 3.5271 -0.6971 0.0051 19 6 2.2373 -1.1077 0.0005 20 6 1.7535 -2.5348 0.0017 21 8 0.4953 -2.6118 -0.6715 22 14 2.9943 -3.6120 -0.8762 23 1 4.3017 -3.5321 -0.1766 24 1 2.5172 -5.0183 -0.8756 25 1 3.1528 -3.1442 -2.2766 26 1 -0.3634 0.0000 1.0277 27 1 -0.3635 0.8899 -0.5139 28 1 -0.3633 -0.8900 -0.5138 29 1 3.5230 3.3255 -0.0661 30 1 6.8536 2.6048 -1.0431 31 1 8.7361 4.2117 -0.8208 32 1 7.9992 8.5588 -0.8959 33 1 9.7683 8.7301 -0.8039 34 1 9.0481 7.4807 -1.8476 35 1 8.8432 7.0280 2.9489 36 1 9.6395 8.4439 2.2220 37 1 7.8699 8.2732 2.1301 38 1 10.7116 5.3524 -0.4482 39 1 11.4320 6.6015 0.5956 40 1 10.6359 5.1853 1.3223 41 1 4.4513 5.3047 1.2522 42 1 4.4108 -1.3180 0.0104 43 1 1.6371 -2.8782 1.0296 44 1 0.5240 -2.3210 -1.5933 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16733946_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:46:52 Heat of formation + Delta-G solvation = 9.474978 kcal Electronic energy + Delta-G solvation = -25580.859492 eV Core-core repulsion = 21851.678811 eV Total energy + Delta-G solvation = -3729.180682 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 334.137 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -43.94366 -41.58814 -39.87917 -38.36771 -36.07285 -34.55808 -33.02942 -32.75845 -30.90202 -29.44744 -28.61505 -28.37793 -28.27961 -26.94353 -25.11038 -24.48831 -23.17834 -22.30652 -20.96840 -19.55374 -18.48980 -17.75757 -17.67185 -17.46032 -17.27320 -16.81259 -16.18683 -16.08670 -15.69372 -15.50622 -15.33041 -14.88578 -14.72616 -14.50367 -14.15542 -14.02278 -13.87554 -13.76980 -13.75698 -13.70172 -13.42611 -13.18770 -13.13113 -12.97939 -12.74643 -12.53464 -12.19285 -11.94049 -11.87658 -11.48456 -11.38085 -11.05174 -10.87461 -10.79235 -10.47200 -10.27478 -10.05887 -10.02901 -9.22101 -0.02050 0.43754 0.51540 0.69713 0.98203 1.33265 1.34517 1.46452 1.65464 1.80479 1.93433 1.98026 2.00680 2.28783 2.59473 2.85713 3.03131 3.19165 3.20109 3.74364 3.86980 4.03824 4.05456 4.14102 4.18496 4.23954 4.36304 4.44049 4.46607 4.57980 4.72139 4.76717 4.79528 4.81463 4.83187 4.91609 4.95339 4.96939 5.16415 5.22062 5.33314 5.51677 5.52137 5.60014 5.72170 5.86298 6.03386 6.20868 6.71806 6.99475 7.13876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.258 5.258 3 N -0.253 5.253 4 C -0.019 4.019 5 C 0.610 3.390 6 O -0.510 6.510 7 N -0.658 5.658 8 C 0.102 3.898 9 C -0.089 4.089 10 C -0.132 4.132 11 C -0.179 4.179 12 Si 1.102 2.898 13 C -0.450 4.450 14 C -0.443 4.443 15 C -0.454 4.454 16 N -0.430 5.430 17 C 0.062 3.938 18 C -0.176 4.176 19 C -0.018 4.018 20 C -0.056 4.056 21 O -0.537 6.537 22 Si 0.971 3.029 23 H -0.243 1.243 24 H -0.246 1.246 25 H -0.248 1.248 26 H 0.086 0.914 27 H 0.094 0.906 28 H 0.122 0.878 29 H 0.420 0.580 30 H 0.147 0.853 31 H 0.138 0.862 32 H 0.071 0.929 33 H 0.074 0.926 34 H 0.069 0.931 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.075 0.925 38 H 0.070 0.930 39 H 0.076 0.924 40 H 0.071 0.929 41 H 0.154 0.846 42 H 0.168 0.832 43 H 0.131 0.869 44 H 0.380 0.620 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.431 -1.725 -1.801 4.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.047 5.047 3 N -0.091 5.091 4 C -0.178 4.178 5 C 0.396 3.604 6 O -0.382 6.382 7 N -0.304 5.304 8 C 0.006 3.994 9 C -0.116 4.116 10 C -0.152 4.152 11 C -0.356 4.356 12 Si 1.290 2.710 13 C -0.558 4.558 14 C -0.551 4.551 15 C -0.562 4.562 16 N -0.138 5.138 17 C -0.098 4.098 18 C -0.204 4.204 19 C -0.143 4.143 20 C -0.167 4.167 21 O -0.343 6.343 22 Si 0.790 3.210 23 H -0.166 1.166 24 H -0.169 1.169 25 H -0.171 1.171 26 H 0.105 0.895 27 H 0.113 0.887 28 H 0.140 0.860 29 H 0.257 0.743 30 H 0.165 0.835 31 H 0.156 0.844 32 H 0.091 0.909 33 H 0.093 0.907 34 H 0.088 0.912 35 H 0.087 0.913 36 H 0.087 0.913 37 H 0.095 0.905 38 H 0.089 0.911 39 H 0.095 0.905 40 H 0.091 0.909 41 H 0.171 0.829 42 H 0.186 0.814 43 H 0.148 0.852 44 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges -3.282 -1.211 -1.187 3.694 hybrid contribution -0.492 -0.993 -0.656 1.288 sum -3.774 -2.204 -1.843 4.743 Atomic orbital electron populations 1.22698 0.72134 1.06834 1.05450 1.45393 1.08128 1.01969 1.49213 1.73512 1.02721 1.14231 1.18631 1.21505 0.90523 0.93672 1.12102 1.16938 0.87000 0.80866 0.75549 1.90821 1.22395 1.76807 1.48214 1.43243 1.09764 1.05115 1.72267 1.18858 0.89207 0.92451 0.98879 1.21804 0.92132 1.00414 0.97296 1.22173 0.99458 0.94544 0.99011 1.30171 1.04451 1.04243 0.96721 0.77719 0.61565 0.63898 0.67780 1.26124 1.04803 1.11254 1.13618 1.26009 1.04812 1.08284 1.16043 1.26209 1.16537 1.08749 1.04724 1.68141 0.99094 1.30148 1.16402 1.22910 0.99270 0.90894 0.96739 1.21547 0.96631 0.93742 1.08485 1.21945 0.91164 0.91695 1.09449 1.24833 0.94213 0.93242 1.04399 1.86488 1.29928 1.88665 1.29204 0.85386 0.77043 0.78582 0.80024 1.16577 1.16867 1.17084 0.89503 0.88691 0.86011 0.74309 0.83510 0.84446 0.90947 0.90729 0.91223 0.91302 0.91270 0.90546 0.91060 0.90537 0.90938 0.82854 0.81414 0.85157 0.77127 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.24 11.00 59.85 0.66 0.42 16 2 N -0.26 0.03 3.70 -63.86 -0.24 -0.21 16 3 N -0.25 -0.44 11.68 33.42 0.39 -0.05 16 4 C -0.02 -0.05 7.13 -82.77 -0.59 -0.64 16 5 C 0.61 2.35 7.68 -12.40 -0.10 2.25 16 6 O -0.51 -3.22 14.40 5.29 0.08 -3.14 16 7 N -0.66 -1.33 5.34 -10.66 -0.06 -1.39 16 8 C 0.10 0.32 6.32 -83.56 -0.53 -0.21 16 9 C -0.09 -0.32 8.81 -39.09 -0.34 -0.66 16 10 C -0.13 -0.28 9.32 -39.48 -0.37 -0.65 16 11 C -0.18 -0.37 5.36 -17.53 -0.09 -0.47 16 12 Si 1.10 -1.19 12.77 -169.99 -2.17 -3.37 16 13 C -0.45 0.31 8.65 101.05 0.87 1.19 16 14 C -0.44 -0.04 8.65 101.05 0.87 0.83 16 15 C -0.45 0.56 8.52 101.05 0.86 1.42 16 16 N -0.43 -1.48 9.84 20.61 0.20 -1.28 16 17 C 0.06 0.17 11.13 -17.32 -0.19 -0.02 16 18 C -0.18 -0.28 9.35 -39.36 -0.37 -0.65 16 19 C -0.02 0.01 6.17 -82.21 -0.51 -0.50 16 20 C -0.06 0.15 2.99 36.00 0.11 0.26 16 21 O -0.54 1.86 10.02 -35.23 -0.35 1.50 16 22 Si 0.97 -2.17 26.64 -169.99 -4.53 -6.70 16 23 H -0.24 0.30 6.87 56.52 0.39 0.69 16 24 H -0.25 0.30 7.11 56.52 0.40 0.71 16 25 H -0.25 0.32 7.11 56.52 0.40 0.72 16 26 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 27 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 28 H 0.12 -0.61 5.00 -51.93 -0.26 -0.87 16 29 H 0.42 -0.06 8.55 -40.82 -0.35 -0.41 16 30 H 0.15 0.59 6.32 -52.49 -0.33 0.26 16 31 H 0.14 -0.06 7.38 -52.49 -0.39 -0.45 16 32 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 33 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 34 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 35 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 36 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 37 H 0.08 0.06 7.96 -51.93 -0.41 -0.35 16 38 H 0.07 -0.12 7.65 -51.93 -0.40 -0.52 16 39 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 40 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 41 H 0.15 0.05 8.06 -52.49 -0.42 -0.37 16 42 H 0.17 0.14 6.87 -52.48 -0.36 -0.22 16 43 H 0.13 -0.48 7.96 -51.93 -0.41 -0.89 16 44 H 0.38 -2.41 8.39 45.56 0.38 -2.03 16 LS Contribution 372.73 15.07 5.62 5.62 Total: 0.00 -8.74 372.73 -6.28 -15.01 By element: Atomic # 1 Polarization: -3.07 SS G_CDS: -5.50 Total: -8.57 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: 0.29 Total: 2.56 kcal Atomic # 7 Polarization: -3.22 SS G_CDS: 0.30 Total: -2.92 kcal Atomic # 8 Polarization: -1.36 SS G_CDS: -0.28 Total: -1.64 kcal Atomic # 14 Polarization: -3.36 SS G_CDS: -6.70 Total: -10.06 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -8.74 -6.28 -15.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16733946_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.490 kcal (2) G-P(sol) polarization free energy of solvation -8.739 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.275 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.015 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds