Wall clock time and date at job start Thu Mar 4 2021 16:32:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34231 * 116.99711 * 2 1 4 4 O 1.20823 * 119.99922 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99583 * 179.97438 * 3 2 1 6 6 H 1.08991 * 109.47645 * 300.00367 * 5 3 2 7 7 C 1.53001 * 109.46849 * 60.00982 * 5 3 2 8 8 C 1.53005 * 109.47110 * 179.97438 * 7 5 3 9 9 C 1.52995 * 109.46882 * 299.99585 * 8 7 5 10 10 F 1.39896 * 109.47133 * 180.02562 * 9 8 7 11 11 C 1.53004 * 109.47342 * 299.99865 * 9 8 7 12 12 N 1.46492 * 109.47180 * 300.00488 * 11 9 8 13 13 C 1.34778 * 120.00114 * 179.97438 * 12 11 9 14 14 O 1.21565 * 119.99964 * 359.97438 * 13 12 11 15 15 C 1.47706 * 120.00100 * 179.97438 * 13 12 11 16 16 N 1.31810 * 126.51798 * 0.02562 * 15 13 12 17 17 N 1.28474 * 110.07227 * 179.97438 * 16 15 13 18 18 C 1.46498 * 124.88160 * 179.73361 * 17 16 15 19 19 C 1.35030 * 110.23024 * 0.02562 * 17 16 15 20 20 C 1.50705 * 126.38328 * 179.97438 * 19 17 16 21 21 O 1.42899 * 109.47030 * 329.99551 * 20 19 17 22 22 Si 1.86302 * 109.46966 * 209.99702 * 20 19 17 23 23 C 1.35363 * 107.22817 * 359.97438 * 19 17 16 24 24 C 1.53004 * 109.47085 * 59.99962 * 9 8 7 25 25 C 1.52991 * 109.47358 * 299.99913 * 24 9 8 26 26 H 1.08997 * 109.47046 * 59.99642 * 1 2 3 27 27 H 1.09000 * 109.47123 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46602 * 299.99143 * 1 2 3 29 29 H 1.09002 * 109.46882 * 299.99527 * 7 5 3 30 30 H 1.08991 * 109.47499 * 59.99295 * 7 5 3 31 31 H 1.09000 * 109.46955 * 179.97438 * 8 7 5 32 32 H 1.09006 * 109.46833 * 59.99597 * 8 7 5 33 33 H 1.08994 * 109.47361 * 179.97438 * 11 9 8 34 34 H 1.09003 * 109.46853 * 60.00236 * 11 9 8 35 35 H 0.97006 * 119.99944 * 359.97438 * 12 11 9 36 36 H 1.09000 * 109.47309 * 90.02535 * 18 17 16 37 37 H 1.09006 * 109.47397 * 210.02784 * 18 17 16 38 38 H 1.09000 * 109.47405 * 330.02049 * 18 17 16 39 39 H 1.08993 * 109.47128 * 89.99510 * 20 19 17 40 40 H 0.96701 * 114.00196 * 180.02562 * 21 20 19 41 41 H 1.48504 * 110.00053 * 59.99495 * 22 20 19 42 42 H 1.48500 * 110.00046 * 181.31758 * 22 20 19 43 43 H 1.08001 * 127.24520 * 180.02562 * 23 19 17 44 44 H 1.09000 * 109.46827 * 60.00172 * 24 9 8 45 45 H 1.09002 * 109.47057 * 179.97438 * 24 9 8 46 46 H 1.09000 * 109.47475 * 179.97438 * 25 24 9 47 47 H 1.09005 * 109.47150 * 300.00317 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9558 0.7809 0.8907 7 6 4.1138 0.5812 -1.2485 8 6 5.6417 0.6618 -1.2482 9 6 6.0750 2.1291 -1.2486 10 9 7.4720 2.2028 -1.2490 11 6 5.5279 2.8222 -2.4981 12 7 6.0520 2.1580 -3.6940 13 6 5.7024 2.6000 -4.9183 14 8 4.9518 3.5496 -5.0302 15 6 6.2314 1.9306 -6.1240 16 7 7.0482 0.8965 -6.1525 17 7 7.3050 0.5708 -7.3684 18 6 8.1819 -0.5307 -7.7733 19 6 6.6554 1.3937 -8.2194 20 6 6.6993 1.3385 -9.7248 21 8 7.9642 0.8239 -10.1458 22 14 6.4649 3.0525 -10.4161 23 6 5.9574 2.2773 -7.4682 24 6 5.5275 2.8228 0.0004 25 6 3.9997 2.7423 0.0003 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3632 0.5137 0.8901 29 1 3.8047 -0.4641 -1.2484 30 1 3.7244 1.0752 -2.1386 31 1 6.0317 0.1672 -2.1379 32 1 6.0315 0.1680 -0.3580 33 1 5.8362 3.8676 -2.4981 34 1 4.4394 2.7648 -2.4982 35 1 6.6508 1.4000 -3.6047 36 1 7.5957 -1.4443 -7.8724 37 1 8.6471 -0.2920 -8.7298 38 1 8.9556 -0.6753 -7.0193 39 1 5.9035 0.6883 -10.0879 40 1 8.0634 0.7607 -11.1057 41 1 7.5438 3.9488 -9.9283 42 1 6.4744 3.0072 -11.9004 43 1 5.3245 3.0783 -7.8207 44 1 5.9173 2.3291 0.8906 45 1 5.8365 3.8681 0.0004 46 1 3.6096 3.2361 0.8903 47 1 3.6099 3.2360 -0.8900 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16738254_13259642.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:32:14 Heat of formation + Delta-G solvation = -120.268678 kcal Electronic energy + Delta-G solvation = -32736.488192 eV Core-core repulsion = 28030.335100 eV Total energy + Delta-G solvation = -4706.153091 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.163 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -48.81867 -43.83562 -41.84124 -40.67708 -39.31554 -38.10364 -37.54637 -35.75119 -34.42588 -32.89363 -32.37922 -31.88380 -29.19591 -28.54050 -27.49350 -26.52786 -24.56599 -24.22882 -23.74546 -22.18126 -21.73378 -20.95303 -20.19025 -18.73316 -18.65977 -18.52518 -18.00178 -17.71096 -17.61261 -17.43694 -17.39518 -17.04964 -16.22692 -16.14418 -15.93728 -15.80266 -15.25929 -15.07426 -14.95232 -14.81629 -14.77298 -14.55309 -14.12228 -14.02212 -13.98852 -13.70216 -13.50195 -13.39661 -13.36106 -13.13907 -12.88168 -12.73590 -12.68932 -12.43240 -12.30632 -12.19619 -11.86541 -11.84148 -11.53285 -11.42293 -11.31733 -11.13613 -11.00562 -10.38824 -10.06899 -9.88596 -4.89222 0.40501 0.78720 1.09784 1.25906 1.52567 1.64025 1.70001 1.96646 2.00821 2.25696 2.92989 3.20640 3.24156 3.26302 3.33226 3.48699 3.50671 3.68803 3.75307 3.94669 4.02032 4.12597 4.22524 4.28169 4.29411 4.29767 4.31781 4.33615 4.36552 4.36866 4.46980 4.55364 4.62970 4.65323 4.70397 4.76192 4.83806 4.94361 4.95341 4.99650 5.02390 5.12923 5.19141 5.26217 5.28681 5.37170 5.67053 6.25590 6.49545 6.65346 6.78661 7.02690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.462 3.538 4 O -0.539 6.539 5 C -0.077 4.077 6 H 0.140 0.860 7 C -0.106 4.106 8 C -0.132 4.132 9 C 0.113 3.887 10 F -0.212 7.212 11 C 0.094 3.906 12 N -0.706 5.706 13 C 0.606 3.394 14 O -0.562 6.562 15 C -0.040 4.040 16 N -0.268 5.268 17 N -0.263 5.263 18 C 0.070 3.930 19 C 0.025 3.975 20 C -0.045 4.045 21 O -0.553 6.553 22 Si 0.774 3.226 23 C -0.191 4.191 24 C -0.128 4.128 25 C -0.105 4.105 26 H 0.058 0.942 27 H 0.129 0.871 28 H 0.061 0.939 29 H 0.099 0.901 30 H 0.062 0.938 31 H 0.084 0.916 32 H 0.105 0.895 33 H 0.073 0.927 34 H 0.093 0.907 35 H 0.414 0.586 36 H 0.099 0.901 37 H 0.128 0.872 38 H 0.097 0.903 39 H 0.118 0.882 40 H 0.406 0.594 41 H -0.312 1.312 42 H -0.264 1.264 43 H 0.184 0.816 44 H 0.104 0.896 45 H 0.088 0.912 46 H 0.084 0.916 47 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.224 -7.366 -2.363 7.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.307 3.693 4 O -0.428 6.428 5 C -0.096 4.096 6 H 0.158 0.842 7 C -0.143 4.143 8 C -0.170 4.170 9 C 0.095 3.905 10 F -0.193 7.193 11 C -0.030 4.030 12 N -0.358 5.358 13 C 0.391 3.609 14 O -0.439 6.439 15 C -0.198 4.198 16 N -0.106 5.106 17 N -0.052 5.052 18 C -0.068 4.068 19 C -0.100 4.100 20 C -0.155 4.155 21 O -0.365 6.365 22 Si 0.677 3.323 23 C -0.219 4.219 24 C -0.166 4.166 25 C -0.143 4.143 26 H 0.077 0.923 27 H 0.147 0.853 28 H 0.080 0.920 29 H 0.117 0.883 30 H 0.081 0.919 31 H 0.103 0.897 32 H 0.123 0.877 33 H 0.091 0.909 34 H 0.111 0.889 35 H 0.251 0.749 36 H 0.117 0.883 37 H 0.146 0.854 38 H 0.116 0.884 39 H 0.136 0.864 40 H 0.260 0.740 41 H -0.240 1.240 42 H -0.189 1.189 43 H 0.201 0.799 44 H 0.123 0.877 45 H 0.106 0.894 46 H 0.102 0.898 47 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.590 -6.654 -1.635 6.878 hybrid contribution 0.441 -0.150 -1.015 1.117 sum 1.031 -6.805 -2.650 7.375 Atomic orbital electron populations 1.23513 0.75170 1.05575 1.02344 1.86502 1.24607 1.33026 1.83562 1.24292 0.92926 0.81052 0.71077 1.90687 1.68109 1.37473 1.46562 1.21266 0.85322 0.99510 1.03509 0.84196 1.21511 0.94657 1.02540 0.95639 1.22099 0.95831 0.93386 1.05669 1.21261 0.75390 0.98217 0.95680 1.92885 1.31214 1.97569 1.97585 1.22177 1.00522 0.97279 0.82989 1.45667 1.50055 1.35528 1.04537 1.16986 0.79678 0.82089 0.82131 1.90793 1.37509 1.28772 1.86810 1.21722 1.04116 0.98954 0.94982 1.73450 1.16835 1.15459 1.04850 1.45690 1.33393 1.24339 1.01783 1.22804 0.93493 0.86222 1.04294 1.21181 1.00100 0.95021 0.93696 1.24429 0.89567 1.12499 0.89004 1.86337 1.34153 1.85531 1.30482 0.93377 0.88406 0.72917 0.77627 1.21639 1.06310 1.03351 0.90576 1.22045 0.94993 1.02758 0.96779 1.21463 0.94714 0.93804 1.04282 0.92328 0.85290 0.92029 0.88277 0.91903 0.89740 0.87678 0.90904 0.88920 0.74855 0.88290 0.85423 0.88391 0.86434 0.74031 1.23952 1.18945 0.79897 0.87739 0.89356 0.89757 0.91497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.74 10.47 -51.42 -0.54 -1.28 16 3 C 0.46 1.65 7.25 71.24 0.52 2.17 16 4 O -0.54 -5.68 15.73 21.97 0.35 -5.34 16 5 C -0.08 0.24 2.63 -11.54 -0.03 0.21 16 6 H 0.14 -1.12 8.14 -2.39 -0.02 -1.14 16 7 C -0.11 0.45 4.86 30.60 0.15 0.60 16 8 C -0.13 0.68 5.01 30.59 0.15 0.83 16 9 C 0.11 -0.18 1.08 -10.79 -0.01 -0.19 16 10 F -0.21 -0.65 16.67 44.97 0.75 0.10 16 11 C 0.09 0.26 4.18 86.38 0.36 0.62 16 12 N -0.71 -3.48 5.18 -466.12 -2.42 -5.89 16 13 C 0.61 6.36 7.82 86.75 0.68 7.04 16 14 O -0.56 -9.16 16.93 -3.92 -0.07 -9.22 16 15 C -0.04 -0.36 7.13 42.45 0.30 -0.06 16 16 N -0.27 -1.91 11.67 -48.18 -0.56 -2.47 16 17 N -0.26 -0.97 3.70 -355.92 -1.32 -2.29 16 18 C 0.07 -0.24 11.01 127.77 1.41 1.16 16 19 C 0.03 0.07 6.21 41.40 0.26 0.32 16 20 C -0.05 0.20 2.98 71.24 0.21 0.41 16 21 O -0.55 3.07 9.76 -148.98 -1.45 1.62 16 22 Si 0.77 -2.58 31.23 68.60 2.14 -0.44 16 23 C -0.19 -1.08 9.35 22.41 0.21 -0.87 16 24 C -0.13 0.52 5.19 30.59 0.16 0.68 16 25 C -0.11 0.22 4.22 30.59 0.13 0.34 16 26 H 0.06 0.01 8.13 -2.39 -0.02 0.00 16 27 H 0.13 -0.87 8.14 -2.39 -0.02 -0.88 16 28 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 29 H 0.10 -0.57 8.11 -2.39 -0.02 -0.59 16 30 H 0.06 -0.06 6.43 -2.39 -0.02 -0.07 16 31 H 0.08 -0.41 6.86 -2.39 -0.02 -0.43 16 32 H 0.10 -0.85 8.14 -2.38 -0.02 -0.87 16 33 H 0.07 0.37 8.14 -2.39 -0.02 0.35 16 34 H 0.09 0.30 4.81 -2.39 -0.01 0.28 16 35 H 0.41 1.05 6.99 -92.70 -0.65 0.40 16 36 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 37 H 0.13 -0.60 5.18 -2.38 -0.01 -0.61 16 38 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 39 H 0.12 -1.15 7.96 -2.39 -0.02 -1.17 16 40 H 0.41 -5.60 8.74 -74.06 -0.65 -6.25 16 41 H -0.31 -2.19 7.11 99.48 0.71 -1.49 16 42 H -0.26 0.41 7.11 99.48 0.71 1.12 16 43 H 0.18 0.33 7.03 -2.91 -0.02 0.31 16 44 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 45 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 46 H 0.08 -0.12 8.10 -2.39 -0.02 -0.14 16 47 H 0.07 0.09 6.39 -2.38 -0.02 0.07 16 Total: 0.00 -26.51 383.02 2.35 -24.16 By element: Atomic # 1 Polarization: -13.17 SS G_CDS: -0.22 Total: -13.40 kcal Atomic # 6 Polarization: 8.76 SS G_CDS: 5.69 Total: 14.45 kcal Atomic # 7 Polarization: -6.36 SS G_CDS: -4.29 Total: -10.65 kcal Atomic # 8 Polarization: -12.51 SS G_CDS: -1.71 Total: -14.22 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.75 Total: 0.10 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.14 Total: -0.44 kcal Total: -26.51 2.35 -24.16 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16738254_13259642.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.113 kcal (2) G-P(sol) polarization free energy of solvation -26.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.350 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds