Wall clock time and date at job start Thu Mar 4 2021 16:32:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 N 1.28468 * 124.88590 * 2 1 4 4 C 1.31809 * 110.06929 * 180.15884 * 3 2 1 5 5 C 1.47714 * 126.51794 * 179.82155 * 4 3 2 6 6 O 1.21568 * 120.00131 * 179.69259 * 5 4 3 7 7 N 1.34778 * 119.99815 * 359.68880 * 5 4 3 8 8 C 1.46499 * 119.99771 * 179.97438 * 7 5 4 9 9 H 1.08992 * 109.47397 * 325.00275 * 8 7 5 10 10 C 1.53002 * 109.46799 * 85.00174 * 8 7 5 11 11 C 1.52997 * 109.46817 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47452 * 300.00239 * 11 10 8 13 13 C 1.53002 * 109.47197 * 180.02562 * 12 11 10 14 14 F 1.39905 * 109.46739 * 299.99764 * 12 11 10 15 15 C 1.52999 * 109.47159 * 59.99536 * 12 11 10 16 16 C 1.52997 * 109.47317 * 300.00546 * 15 12 11 17 17 C 1.41501 * 106.96253 * 359.56093 * 4 3 2 18 18 C 1.35038 * 124.87911 * 179.66618 * 2 1 3 19 19 C 1.50698 * 126.38640 * 359.97438 * 18 2 1 20 20 O 1.42905 * 109.46876 * 30.00910 * 19 18 2 21 21 Si 1.86299 * 109.46787 * 150.00337 * 19 18 2 22 22 H 1.08992 * 109.47174 * 270.34191 * 1 2 3 23 23 H 1.09008 * 109.47027 * 30.33559 * 1 2 3 24 24 H 1.08996 * 109.47426 * 150.32944 * 1 2 3 25 25 H 0.97006 * 119.99662 * 0.02562 * 7 5 4 26 26 H 1.08993 * 109.47662 * 299.99952 * 10 8 7 27 27 H 1.09002 * 109.47075 * 60.00457 * 10 8 7 28 28 H 1.09002 * 109.47153 * 60.00231 * 11 10 8 29 29 H 1.09001 * 109.47289 * 180.02562 * 11 10 8 30 30 H 1.09001 * 109.47142 * 59.99766 * 13 12 11 31 31 H 1.08996 * 109.46698 * 179.97438 * 13 12 11 32 32 H 1.09002 * 109.46838 * 299.99316 * 13 12 11 33 33 H 1.08996 * 109.46929 * 179.97438 * 15 12 11 34 34 H 1.09002 * 109.46716 * 60.00455 * 15 12 11 35 35 H 1.09002 * 109.47153 * 299.99641 * 16 15 12 36 36 H 1.09001 * 109.46832 * 179.97438 * 16 15 12 37 37 H 1.08008 * 127.24411 * 180.25776 * 17 4 3 38 38 H 1.08994 * 109.47514 * 270.00299 * 19 18 2 39 39 H 0.96702 * 113.99377 * 180.02562 * 20 19 18 40 40 H 1.48500 * 110.00356 * 300.00102 * 21 19 18 41 41 H 1.48495 * 110.00236 * 61.32348 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7167 -0.0034 5 6 4.6274 1.6396 -0.0083 6 8 5.7598 1.1974 -0.0055 7 7 4.4243 2.9720 -0.0159 8 6 5.5682 3.8873 -0.0202 9 1 6.3773 3.4603 0.5722 10 6 6.0459 4.0997 -1.4581 11 6 7.2402 5.0561 -1.4626 12 6 6.8206 6.3988 -0.8609 13 6 8.0147 7.3554 -0.8660 14 9 5.7818 6.9463 -1.6215 15 6 6.3427 6.1864 0.5769 16 6 5.1485 5.2300 0.5815 17 6 3.5271 -0.6972 0.0046 18 6 2.2373 -1.1078 0.0065 19 6 1.7532 -2.5349 0.0153 20 8 0.4951 -2.6153 -0.6576 21 14 2.9941 -3.6168 -0.8567 22 1 -0.3633 0.0061 1.0276 23 1 -0.3633 0.8870 -0.5191 24 1 -0.3634 -0.8929 -0.5087 25 1 3.5207 3.3248 -0.0178 26 1 6.3445 3.1431 -1.8869 27 1 5.2367 4.5267 -2.0505 28 1 8.0495 4.6295 -0.8700 29 1 7.5803 5.2078 -2.4870 30 1 8.3547 7.5067 -1.8905 31 1 7.7156 8.3120 -0.4378 32 1 8.8243 6.9290 -0.2736 33 1 6.0443 7.1430 1.0057 34 1 7.1521 5.7598 1.1695 35 1 4.3391 5.6566 -0.0111 36 1 4.8084 5.0783 1.6059 37 1 4.4108 -1.3182 0.0083 38 1 1.6369 -2.8727 1.0450 39 1 0.1227 -3.5072 -0.6899 40 1 3.1619 -3.1665 -2.2618 41 1 4.2982 -3.5668 -0.1483 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16738386_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:32:29 Heat of formation + Delta-G solvation = -44.361344 kcal Electronic energy + Delta-G solvation = -24637.295031 eV Core-core repulsion = 20855.561672 eV Total energy + Delta-G solvation = -3781.733359 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.148 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -48.70225 -43.98534 -41.00063 -38.83017 -37.94146 -35.57792 -34.54079 -33.01824 -32.07705 -32.05896 -28.79788 -27.33158 -26.54405 -24.44320 -24.06932 -22.47647 -22.19363 -21.22580 -20.56225 -18.72268 -18.45276 -17.75422 -17.47493 -17.45651 -16.94955 -16.55258 -16.20945 -16.02099 -15.81823 -15.56970 -15.20745 -14.94949 -14.78984 -14.56781 -14.05811 -13.85998 -13.68925 -13.60903 -13.47910 -13.29950 -13.21966 -12.98567 -12.95507 -12.69900 -12.21909 -12.18708 -12.07458 -11.87463 -11.66177 -11.29253 -11.17271 -10.92536 -10.44395 -10.15983 -9.97704 -5.03153 0.27439 0.63877 1.16699 1.51415 1.66475 1.93954 2.04494 2.12031 2.96850 3.09993 3.35814 3.46076 3.49815 3.59689 3.65418 3.78794 3.91898 3.96749 4.17882 4.18447 4.21488 4.28517 4.33333 4.35250 4.40824 4.44825 4.55316 4.57063 4.69876 4.72137 4.81911 4.89605 4.92552 4.98846 5.02354 5.04308 5.13622 5.17696 5.29363 5.36295 5.55681 6.22744 6.65146 6.82442 6.94759 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.257 5.257 3 N -0.262 5.262 4 C -0.038 4.038 5 C 0.605 3.395 6 O -0.567 6.567 7 N -0.702 5.702 8 C 0.146 3.854 9 H 0.084 0.916 10 C -0.128 4.128 11 C -0.133 4.133 12 C 0.110 3.890 13 C -0.173 4.173 14 F -0.225 7.225 15 C -0.132 4.132 16 C -0.122 4.122 17 C -0.217 4.217 18 C 0.029 3.971 19 C -0.043 4.043 20 O -0.557 6.557 21 Si 0.813 3.187 22 H 0.100 0.900 23 H 0.099 0.901 24 H 0.137 0.863 25 H 0.414 0.586 26 H 0.054 0.946 27 H 0.064 0.936 28 H 0.095 0.905 29 H 0.078 0.922 30 H 0.065 0.935 31 H 0.071 0.929 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.099 0.901 35 H 0.073 0.927 36 H 0.086 0.914 37 H 0.156 0.844 38 H 0.119 0.881 39 H 0.416 0.584 40 H -0.311 1.311 41 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.440 -3.897 2.852 7.274 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.046 5.046 3 N -0.100 5.100 4 C -0.196 4.196 5 C 0.390 3.610 6 O -0.444 6.444 7 N -0.352 5.352 8 C 0.042 3.958 9 H 0.102 0.898 10 C -0.167 4.167 11 C -0.171 4.171 12 C 0.092 3.908 13 C -0.230 4.230 14 F -0.206 7.206 15 C -0.170 4.170 16 C -0.160 4.160 17 C -0.245 4.245 18 C -0.097 4.097 19 C -0.153 4.153 20 O -0.370 6.370 21 Si 0.719 3.281 22 H 0.119 0.881 23 H 0.117 0.883 24 H 0.155 0.845 25 H 0.251 0.749 26 H 0.073 0.927 27 H 0.082 0.918 28 H 0.114 0.886 29 H 0.096 0.904 30 H 0.084 0.916 31 H 0.090 0.910 32 H 0.110 0.890 33 H 0.109 0.891 34 H 0.117 0.883 35 H 0.091 0.909 36 H 0.105 0.895 37 H 0.173 0.827 38 H 0.136 0.864 39 H 0.271 0.729 40 H -0.240 1.240 41 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges -4.688 -2.660 2.368 5.888 hybrid contribution 0.117 0.169 -0.074 0.218 sum -4.571 -2.491 2.295 5.689 Atomic orbital electron populations 1.22928 0.70000 1.07864 1.06177 1.45823 1.09399 1.01514 1.47890 1.73457 1.02425 1.14870 1.19295 1.21791 0.91280 0.93968 1.12592 1.16998 0.86222 0.82226 0.75537 1.90769 1.23785 1.77802 1.52085 1.45863 1.11310 1.04527 1.73521 1.21126 0.88382 0.89621 0.96695 0.89826 1.21847 0.98733 0.99413 0.96708 1.22092 0.98419 0.93655 1.02954 1.21158 0.85439 0.93473 0.90760 1.22373 0.97172 0.99546 1.03905 1.92814 1.61761 1.87550 1.78428 1.22098 0.98989 1.01055 0.94871 1.21749 0.99181 0.92799 1.02286 1.21524 0.97122 0.94146 1.11701 1.21460 0.90268 0.91316 1.06643 1.24401 0.95224 0.91613 1.04074 1.86210 1.33926 1.37870 1.78986 0.94583 0.75330 0.83544 0.74680 0.88145 0.88267 0.84480 0.74950 0.92732 0.91752 0.88624 0.90359 0.91581 0.90965 0.88996 0.89101 0.88252 0.90880 0.89505 0.82662 0.86353 0.72939 1.23976 1.22065 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.24 11.00 127.77 1.41 1.17 16 2 N -0.26 -1.34 3.70 -355.92 -1.32 -2.65 16 3 N -0.26 -2.44 11.67 -48.17 -0.56 -3.00 16 4 C -0.04 -0.48 7.13 42.46 0.30 -0.18 16 5 C 0.60 8.10 7.79 86.75 0.68 8.77 16 6 O -0.57 -11.00 16.59 -3.93 -0.07 -11.06 16 7 N -0.70 -4.90 5.07 -445.54 -2.26 -7.16 16 8 C 0.15 0.65 2.45 44.99 0.11 0.77 16 9 H 0.08 0.56 7.58 -2.39 -0.02 0.54 16 10 C -0.13 -0.70 5.37 30.59 0.16 -0.54 16 11 C -0.13 -0.22 5.00 30.60 0.15 -0.07 16 12 C 0.11 0.10 1.23 -10.79 -0.01 0.09 16 13 C -0.17 0.36 8.93 71.98 0.64 1.00 16 14 F -0.22 -1.51 15.77 44.97 0.71 -0.80 16 15 C -0.13 0.25 5.00 30.59 0.15 0.40 16 16 C -0.12 0.00 5.27 30.59 0.16 0.16 16 17 C -0.22 -2.37 9.35 22.41 0.21 -2.16 16 18 C 0.03 0.15 6.21 41.40 0.26 0.41 16 19 C -0.04 0.19 2.98 71.24 0.21 0.40 16 20 O -0.56 4.68 9.76 -148.98 -1.45 3.22 16 21 Si 0.81 -2.64 31.31 68.60 2.15 -0.49 16 22 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 23 H 0.10 -0.47 8.14 -2.38 -0.02 -0.48 16 24 H 0.14 -0.80 5.19 -2.39 -0.01 -0.81 16 25 H 0.41 1.63 8.33 -92.70 -0.77 0.86 16 26 H 0.05 0.52 8.14 -2.39 -0.02 0.50 16 27 H 0.06 0.44 7.80 -2.39 -0.02 0.42 16 28 H 0.10 -0.05 8.14 -2.39 -0.02 -0.07 16 29 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 32 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 33 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 34 H 0.10 -0.44 8.14 -2.39 -0.02 -0.46 16 35 H 0.07 0.08 7.80 -2.39 -0.02 0.06 16 36 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 37 H 0.16 1.76 6.91 -2.91 -0.02 1.74 16 38 H 0.12 -1.16 7.96 -2.39 -0.02 -1.18 16 39 H 0.42 -7.99 8.74 -74.06 -0.65 -8.64 16 40 H -0.31 -2.14 7.11 99.48 0.71 -1.44 16 41 H -0.29 -1.13 6.94 99.48 0.69 -0.44 16 Total: 0.00 -24.26 335.52 1.29 -22.97 By element: Atomic # 1 Polarization: -10.91 SS G_CDS: -0.34 Total: -11.26 kcal Atomic # 6 Polarization: 5.79 SS G_CDS: 4.43 Total: 10.22 kcal Atomic # 7 Polarization: -8.67 SS G_CDS: -4.14 Total: -12.81 kcal Atomic # 8 Polarization: -6.32 SS G_CDS: -1.52 Total: -7.84 kcal Atomic # 9 Polarization: -1.51 SS G_CDS: 0.71 Total: -0.80 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.15 Total: -0.49 kcal Total: -24.26 1.29 -22.97 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16738386_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.390 kcal (2) G-P(sol) polarization free energy of solvation -24.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.972 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds