Wall clock time and date at job start Thu Mar 4 2021 12:45:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28468 * 124.88473 * 2 1 4 4 C 1.31806 * 110.07239 * 179.88347 * 3 2 1 5 5 C 1.47712 * 126.51832 * 180.12896 * 4 3 2 6 6 O 1.21569 * 120.00462 * 180.28173 * 5 4 3 7 7 N 1.34777 * 119.99840 * 0.27934 * 5 4 3 8 8 C 1.46501 * 120.00025 * 180.02562 * 7 5 4 9 9 H 1.08999 * 109.47021 * 325.00388 * 8 7 5 10 10 C 1.52992 * 109.47266 * 85.00212 * 8 7 5 11 11 C 1.53002 * 109.47414 * 180.02562 * 10 8 7 12 12 C 1.52996 * 109.46951 * 299.99860 * 11 10 8 13 13 H 1.08999 * 109.47376 * 300.00008 * 12 11 10 14 14 C 1.53000 * 109.47171 * 179.97438 * 12 11 10 15 15 F 1.39905 * 109.46836 * 65.00474 * 14 12 11 16 16 C 1.53001 * 109.47298 * 60.00102 * 12 11 10 17 17 C 1.52999 * 109.47114 * 300.00211 * 16 12 11 18 18 C 1.41505 * 106.96581 * 0.36293 * 4 3 2 19 19 C 1.35037 * 124.88768 * 180.29460 * 2 1 3 20 20 C 1.50702 * 126.38193 * 359.97438 * 19 2 1 21 21 O 1.42903 * 109.47224 * 29.99646 * 20 19 2 22 22 Si 1.86299 * 109.46964 * 149.99576 * 20 19 2 23 23 H 1.09002 * 109.47391 * 269.69947 * 1 2 3 24 24 H 1.09001 * 109.46813 * 149.70003 * 1 2 3 25 25 H 1.09004 * 109.47041 * 29.70130 * 1 2 3 26 26 H 0.97000 * 120.00194 * 0.02562 * 7 5 4 27 27 H 1.09004 * 109.47244 * 299.99933 * 10 8 7 28 28 H 1.09002 * 109.47458 * 60.00059 * 10 8 7 29 29 H 1.09003 * 109.46933 * 179.97438 * 11 10 8 30 30 H 1.08999 * 109.47087 * 60.00045 * 11 10 8 31 31 H 1.09001 * 109.47479 * 184.99839 * 14 12 11 32 32 H 1.08994 * 109.47387 * 305.00228 * 14 12 11 33 33 H 1.08998 * 109.47741 * 179.97438 * 16 12 11 34 34 H 1.08999 * 109.46984 * 59.99666 * 16 12 11 35 35 H 1.08999 * 109.46750 * 299.99598 * 17 16 12 36 36 H 1.08994 * 109.47741 * 180.02562 * 17 16 12 37 37 H 1.08000 * 127.24578 * 179.77879 * 18 4 3 38 38 H 1.09000 * 109.47386 * 269.99630 * 20 19 2 39 39 H 0.96703 * 113.99827 * 59.99666 * 21 20 19 40 40 H 1.48494 * 110.00074 * 58.68174 * 22 20 19 41 41 H 1.48503 * 109.99940 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7169 0.0025 5 6 4.6273 1.6398 0.0060 6 8 5.7597 1.1977 0.0030 7 7 4.4241 2.9722 0.0126 8 6 5.5679 3.8876 0.0156 9 1 6.3783 3.4545 0.6019 10 6 6.0428 4.1150 -1.4209 11 6 7.2377 5.0705 -1.4178 12 6 6.8204 6.4070 -0.8011 13 1 6.0101 6.8404 -1.3873 14 6 8.0154 7.3624 -0.7974 15 9 8.3783 7.6602 -2.1154 16 6 6.3455 6.1797 0.6354 17 6 5.1506 5.2241 0.6324 18 6 3.5272 -0.6972 -0.0043 19 6 2.2374 -1.1077 -0.0057 20 6 1.7534 -2.5349 -0.0125 21 8 0.4952 -2.6080 -0.6860 22 14 2.9942 -3.6071 -0.8965 23 1 -0.3634 -0.0054 1.0276 24 1 -0.3633 -0.8873 -0.5185 25 1 -0.3633 0.8927 -0.5092 26 1 3.5205 3.3250 0.0154 27 1 6.3406 3.1629 -1.8602 28 1 5.2324 4.5480 -2.0073 29 1 7.5763 5.2321 -2.4413 30 1 8.0480 4.6371 -0.8316 31 1 7.7440 8.2818 -0.2788 32 1 8.8554 6.8915 -0.2868 33 1 6.0485 7.1319 1.0750 34 1 7.1557 5.7463 1.2217 35 1 4.3403 5.6575 0.0462 36 1 4.8119 5.0625 1.6557 37 1 4.4109 -1.3180 -0.0078 38 1 1.6372 -2.8840 1.0135 39 1 0.5238 -2.3120 -1.6061 40 1 4.3152 -3.5148 -0.2246 41 1 2.5284 -5.0170 -0.9107 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16769142_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:45:01 Heat of formation + Delta-G solvation = -49.164363 kcal Electronic energy + Delta-G solvation = -24275.976823 eV Core-core repulsion = 20494.035189 eV Total energy + Delta-G solvation = -3781.941634 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.148 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -48.54778 -43.88147 -41.00210 -39.19515 -38.11530 -35.63352 -34.42208 -32.78252 -31.83721 -31.63439 -28.62380 -27.02717 -26.30536 -24.29769 -23.75082 -22.33623 -22.11332 -21.27763 -20.64836 -19.13874 -17.63094 -17.61138 -17.45176 -17.01656 -16.87471 -16.63683 -16.43795 -16.07472 -15.78456 -15.74009 -15.32507 -15.07300 -14.99872 -14.82632 -14.33169 -14.01983 -13.67259 -13.46872 -13.42904 -13.21418 -13.18312 -12.61867 -12.52648 -12.35337 -12.14392 -11.88070 -11.75433 -11.61322 -11.47836 -11.30241 -11.08020 -10.87691 -10.33748 -10.03348 -9.99720 -4.98235 0.40445 0.77172 1.17215 1.53528 1.69688 1.95772 2.08047 2.25458 3.11150 3.30516 3.30693 3.52469 3.56846 3.68706 3.90095 3.99316 4.06581 4.24299 4.28512 4.30097 4.32301 4.34502 4.37663 4.41288 4.47013 4.48705 4.54041 4.58906 4.76133 4.78500 4.84061 4.87291 5.04974 5.07486 5.14010 5.16982 5.18354 5.31893 5.38632 5.47968 5.65628 6.35260 6.51575 6.79115 7.08515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.258 5.258 3 N -0.260 5.260 4 C -0.039 4.039 5 C 0.603 3.397 6 O -0.570 6.570 7 N -0.703 5.703 8 C 0.144 3.856 9 H 0.072 0.928 10 C -0.122 4.122 11 C -0.111 4.111 12 C -0.117 4.117 13 H 0.085 0.915 14 C 0.057 3.943 15 F -0.239 7.239 16 C -0.105 4.105 17 C -0.118 4.118 18 C -0.198 4.198 19 C -0.006 4.006 20 C -0.034 4.034 21 O -0.541 6.541 22 Si 0.789 3.211 23 H 0.089 0.911 24 H 0.138 0.862 25 H 0.106 0.894 26 H 0.415 0.585 27 H 0.047 0.953 28 H 0.072 0.928 29 H 0.062 0.938 30 H 0.064 0.936 31 H 0.094 0.906 32 H 0.084 0.916 33 H 0.091 0.909 34 H 0.072 0.928 35 H 0.082 0.918 36 H 0.078 0.922 37 H 0.159 0.841 38 H 0.128 0.872 39 H 0.400 0.600 40 H -0.292 1.292 41 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.413 1.207 -0.292 6.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.099 5.099 4 C -0.197 4.197 5 C 0.388 3.612 6 O -0.447 6.447 7 N -0.353 5.353 8 C 0.040 3.960 9 H 0.090 0.910 10 C -0.161 4.161 11 C -0.149 4.149 12 C -0.135 4.135 13 H 0.103 0.897 14 C 0.002 3.998 15 F -0.220 7.220 16 C -0.143 4.143 17 C -0.156 4.156 18 C -0.227 4.227 19 C -0.132 4.132 20 C -0.145 4.145 21 O -0.349 6.349 22 Si 0.693 3.307 23 H 0.107 0.893 24 H 0.156 0.844 25 H 0.124 0.876 26 H 0.251 0.749 27 H 0.066 0.934 28 H 0.091 0.909 29 H 0.081 0.919 30 H 0.083 0.917 31 H 0.112 0.888 32 H 0.102 0.898 33 H 0.109 0.891 34 H 0.090 0.910 35 H 0.101 0.899 36 H 0.097 0.903 37 H 0.177 0.823 38 H 0.145 0.855 39 H 0.251 0.749 40 H -0.219 1.219 41 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges -6.116 0.957 0.307 6.198 hybrid contribution 0.192 -0.342 0.526 0.656 sum -5.924 0.615 0.833 6.014 Atomic orbital electron populations 1.22972 0.70347 1.08233 1.06031 1.45747 1.09078 1.01607 1.48264 1.73468 1.02462 1.14807 1.19120 1.21761 0.91049 0.94182 1.12660 1.17080 0.86327 0.82285 0.75488 1.90784 1.24011 1.77847 1.52065 1.45872 1.11245 1.04594 1.73624 1.21108 0.88176 0.89891 0.96781 0.90974 1.21828 0.98662 0.99184 0.96409 1.21510 0.97497 0.94563 1.01366 1.21777 0.97986 0.95295 0.98469 0.89711 1.22304 0.98448 1.00740 0.78306 1.92731 1.93498 1.95008 1.40795 1.21437 0.97719 1.00357 0.94824 1.21747 0.99262 0.92776 1.01829 1.21620 0.97332 0.93797 1.09908 1.22088 0.90566 0.92336 1.08198 1.24815 0.94485 0.92001 1.03210 1.86450 1.28971 1.88449 1.31009 0.93156 0.73422 0.75639 0.88528 0.89272 0.84390 0.87567 0.74865 0.93426 0.90931 0.91921 0.91679 0.88784 0.89803 0.89065 0.90972 0.89930 0.90297 0.82302 0.85484 0.74869 1.21899 1.20583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.48 11.00 127.77 1.41 0.93 16 2 N -0.26 0.00 3.70 -355.92 -1.32 -1.32 16 3 N -0.26 -1.14 11.67 -48.17 -0.56 -1.71 16 4 C -0.04 -0.30 7.13 42.46 0.30 0.00 16 5 C 0.60 6.00 7.79 86.75 0.68 6.68 16 6 O -0.57 -9.63 16.59 -3.93 -0.07 -9.69 16 7 N -0.70 -2.43 5.07 -445.54 -2.26 -4.70 16 8 C 0.14 0.25 2.45 44.99 0.11 0.36 16 9 H 0.07 0.43 7.58 -2.39 -0.02 0.41 16 10 C -0.12 -0.29 5.49 30.59 0.17 -0.13 16 11 C -0.11 -0.10 5.12 30.59 0.16 0.06 16 12 C -0.12 0.33 2.49 -10.79 -0.03 0.30 16 13 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 14 C 0.06 -0.12 6.91 71.98 0.50 0.37 16 15 F -0.24 -1.33 17.04 44.97 0.77 -0.57 16 16 C -0.11 0.58 5.20 30.59 0.16 0.74 16 17 C -0.12 0.49 5.39 30.59 0.16 0.65 16 18 C -0.20 -1.14 9.35 22.41 0.21 -0.94 16 19 C -0.01 0.00 6.18 41.40 0.26 0.25 16 20 C -0.03 0.15 2.99 71.24 0.21 0.36 16 21 O -0.54 4.19 10.02 -148.98 -1.49 2.70 16 22 Si 0.79 -2.86 31.37 68.60 2.15 -0.71 16 23 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 24 H 0.14 -1.56 5.00 -2.39 -0.01 -1.57 16 25 H 0.11 -1.03 8.14 -2.38 -0.02 -1.05 16 26 H 0.41 -0.11 8.33 -92.71 -0.77 -0.88 16 27 H 0.05 0.35 8.14 -2.39 -0.02 0.33 16 28 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 29 H 0.06 0.18 7.94 -2.39 -0.02 0.16 16 30 H 0.06 0.09 8.14 -2.39 -0.02 0.08 16 31 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 32 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 33 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 34 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 35 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 37 H 0.16 1.00 6.84 -2.91 -0.02 0.98 16 38 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 39 H 0.40 -6.07 8.39 -74.06 -0.62 -6.69 16 40 H -0.29 -1.05 6.83 99.48 0.68 -0.37 16 41 H -0.28 -0.48 7.11 99.48 0.71 0.23 16 Total: 0.00 -20.38 336.63 1.18 -19.19 By element: Atomic # 1 Polarization: -12.53 SS G_CDS: -0.33 Total: -12.86 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 4.29 Total: 9.65 kcal Atomic # 7 Polarization: -3.58 SS G_CDS: -4.14 Total: -7.72 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -1.56 Total: -6.99 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 0.77 Total: -0.57 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: 2.15 Total: -0.71 kcal Total: -20.38 1.18 -19.19 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16769142_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.973 kcal (2) G-P(sol) polarization free energy of solvation -20.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.164 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds