Wall clock time and date at job start Thu Mar 4 2021 14:34:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42900 * 113.99866 * 2 1 4 4 C 1.53001 * 112.84925 * 294.02685 * 3 2 1 5 5 F 1.39897 * 109.47139 * 196.37046 * 4 3 2 6 6 F 1.39896 * 109.47073 * 316.37472 * 4 3 2 7 7 F 1.39901 * 109.47164 * 76.37267 * 4 3 2 8 8 C 1.53775 * 113.61498 * 162.71807 * 3 2 1 9 9 C 1.53777 * 87.08355 * 270.88426 * 8 3 2 10 10 H 1.09009 * 113.69132 * 89.12430 * 9 8 3 11 11 N 1.46501 * 113.61583 * 220.01724 * 9 8 3 12 12 C 1.34777 * 119.99914 * 252.49568 * 11 9 8 13 13 O 1.21570 * 119.99915 * 0.02562 * 12 11 9 14 14 C 1.47710 * 119.99888 * 179.97438 * 12 11 9 15 15 N 1.31812 * 126.51743 * 359.97438 * 14 12 11 16 16 N 1.28462 * 110.07001 * 179.97438 * 15 14 12 17 17 C 1.46503 * 124.87929 * 179.97438 * 16 15 14 18 18 C 1.35030 * 110.23741 * 0.24313 * 16 15 14 19 19 C 1.50698 * 126.39213 * 179.71542 * 18 16 15 20 20 O 1.42903 * 109.46875 * 30.00241 * 19 18 16 21 21 Si 1.86302 * 109.47224 * 149.99793 * 19 18 16 22 22 C 1.35372 * 107.22458 * 359.60553 * 18 16 15 23 23 C 1.53785 * 87.08172 * 334.56631 * 9 8 3 24 24 H 1.08998 * 109.47006 * 303.57777 * 1 2 3 25 25 H 1.08999 * 109.47554 * 63.58365 * 1 2 3 26 26 H 1.09004 * 109.47252 * 183.58234 * 1 2 3 27 27 H 1.09000 * 113.61312 * 156.32992 * 8 3 2 28 28 H 1.09002 * 113.61410 * 25.43455 * 8 3 2 29 29 H 0.97000 * 119.99733 * 72.49449 * 11 9 8 30 30 H 1.09000 * 109.47022 * 90.03034 * 17 16 15 31 31 H 1.08998 * 109.47535 * 330.02683 * 17 16 15 32 32 H 1.09003 * 109.47287 * 210.02160 * 17 16 15 33 33 H 1.08995 * 109.47128 * 270.00491 * 19 18 16 34 34 H 0.96701 * 114.00045 * 59.99559 * 20 19 18 35 35 H 1.48503 * 109.99466 * 58.68842 * 21 19 18 36 36 H 1.48502 * 109.99784 * 180.02562 * 21 19 18 37 37 H 1.07995 * 127.24805 * 180.13973 * 22 18 16 38 38 H 1.08999 * 113.61109 * 139.97898 * 23 9 8 39 39 H 1.08995 * 113.61063 * 270.80152 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7274 2.0817 -1.2878 5 9 2.6085 3.1642 -1.3828 6 9 1.9048 1.2379 -2.3894 7 9 0.4103 2.5529 -1.2686 8 6 3.4898 1.3210 0.4186 9 6 2.9973 1.4823 1.8664 10 1 2.8235 0.5355 2.3779 11 7 3.7993 2.4180 2.6584 12 6 4.6232 1.9539 3.6188 13 8 4.7011 0.7588 3.8275 14 6 5.4323 2.8973 4.4170 15 7 5.4496 4.2100 4.2994 16 7 6.2657 4.7183 5.1515 17 6 6.5362 6.1503 5.3014 18 6 6.8428 3.7424 5.8850 19 6 7.8595 3.9306 6.9813 20 8 7.6449 5.1915 7.6187 21 14 7.6821 2.5633 8.2342 22 6 6.3358 2.5637 5.4537 23 6 1.7212 2.1085 1.2793 24 1 -0.3633 0.5684 0.8562 25 1 -0.3634 0.4572 -0.9203 26 1 -0.3634 -1.0257 0.0642 27 1 4.0400 2.1850 0.0457 28 1 4.0054 0.3784 0.2352 29 1 3.7374 3.3715 2.4916 30 1 5.8421 6.5772 6.0254 31 1 6.4088 6.6468 4.3395 32 1 7.5587 6.2923 5.6511 33 1 8.8623 3.9050 6.5550 34 1 6.7706 5.2850 8.0212 35 1 7.8716 1.2449 7.5774 36 1 8.6790 2.7378 9.3210 37 1 6.5739 1.5763 5.8207 38 1 0.8090 1.8014 1.7909 39 1 1.7874 3.1879 1.1432 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16772210_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:34:45 Heat of formation + Delta-G solvation = -139.994528 kcal Electronic energy + Delta-G solvation = -29809.811614 eV Core-core repulsion = 24921.878764 eV Total energy + Delta-G solvation = -4887.932849 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.113 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.28316 -48.81277 -48.75044 -43.85957 -41.60573 -40.07152 -38.01428 -37.37019 -34.67526 -34.13748 -32.56944 -29.37250 -28.35907 -28.09955 -26.81446 -26.77815 -24.99914 -23.31603 -22.21980 -21.43415 -20.95454 -19.78858 -19.56565 -19.27080 -19.07992 -17.66088 -17.56911 -17.37171 -17.01633 -16.78559 -16.51339 -16.00873 -15.86816 -15.74356 -15.63981 -15.58300 -15.54070 -15.20210 -15.12446 -15.00765 -14.92308 -14.86304 -14.55342 -14.00761 -13.79739 -13.56379 -13.43282 -13.32191 -13.14839 -12.69632 -12.60758 -12.57188 -12.35260 -11.86097 -11.76646 -11.40402 -10.98851 -10.92279 -10.37170 -10.07781 -9.97681 -4.96550 0.40543 0.79766 1.19385 1.41573 1.55952 1.71947 1.97035 2.03468 2.09027 2.23069 2.52020 2.58792 2.81774 3.18496 3.23987 3.31332 3.35430 3.38406 3.49318 3.93424 4.03784 4.24075 4.28035 4.30758 4.36637 4.37519 4.41428 4.42635 4.48745 4.58523 4.61035 4.70798 4.75985 4.80192 4.82264 5.18697 5.30019 5.66493 5.70630 6.30933 6.57688 6.79880 7.04892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.347 6.347 3 C 0.045 3.955 4 C 0.438 3.562 5 F -0.175 7.175 6 F -0.186 7.186 7 F -0.181 7.181 8 C -0.133 4.133 9 C 0.140 3.860 10 H 0.118 0.882 11 N -0.695 5.695 12 C 0.608 3.392 13 O -0.564 6.564 14 C -0.038 4.038 15 N -0.258 5.258 16 N -0.258 5.258 17 C 0.076 3.924 18 C -0.006 4.006 19 C -0.034 4.034 20 O -0.543 6.543 21 Si 0.788 3.212 22 C -0.197 4.197 23 C -0.147 4.147 24 H 0.072 0.928 25 H 0.047 0.953 26 H 0.113 0.887 27 H 0.124 0.876 28 H 0.093 0.907 29 H 0.419 0.581 30 H 0.111 0.889 31 H 0.099 0.901 32 H 0.115 0.885 33 H 0.127 0.873 34 H 0.398 0.602 35 H -0.291 1.291 36 H -0.283 1.283 37 H 0.160 0.840 38 H 0.114 0.886 39 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.970 6.175 4.587 7.941 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.265 6.265 3 C 0.001 3.999 4 C 0.384 3.616 5 F -0.156 7.156 6 F -0.167 7.167 7 F -0.162 7.162 8 C -0.171 4.171 9 C 0.034 3.966 10 H 0.136 0.864 11 N -0.346 5.346 12 C 0.394 3.606 13 O -0.441 6.441 14 C -0.196 4.196 15 N -0.096 5.096 16 N -0.047 5.047 17 C -0.062 4.062 18 C -0.132 4.132 19 C -0.146 4.146 20 O -0.351 6.351 21 Si 0.692 3.308 22 C -0.225 4.225 23 C -0.185 4.185 24 H 0.090 0.910 25 H 0.065 0.935 26 H 0.131 0.869 27 H 0.142 0.858 28 H 0.112 0.888 29 H 0.257 0.743 30 H 0.129 0.871 31 H 0.118 0.882 32 H 0.133 0.867 33 H 0.144 0.856 34 H 0.249 0.751 35 H -0.218 1.218 36 H -0.209 1.209 37 H 0.178 0.822 38 H 0.133 0.867 39 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -1.297 5.639 4.307 7.213 hybrid contribution 0.328 0.050 -0.904 0.963 sum -0.969 5.689 3.403 6.700 Atomic orbital electron populations 1.23311 0.78423 1.05475 1.01849 1.88113 1.22360 1.22059 1.93998 1.23574 0.99986 0.86476 0.89837 1.21259 0.74298 0.78612 0.87479 1.93176 1.68928 1.56912 1.96581 1.93195 1.95008 1.71115 1.57416 1.93193 1.36833 1.89362 1.96813 1.23763 0.91442 1.05965 0.95944 1.22214 0.90188 0.94564 0.89588 0.86415 1.45639 1.42323 1.11373 1.35243 1.17049 0.78463 0.86189 0.78888 1.90807 1.67271 1.16565 1.69443 1.21698 1.04698 0.90571 1.02662 1.73469 1.13018 1.09568 1.13539 1.45721 1.27365 1.09439 1.22163 1.22681 1.05603 0.72181 1.05740 1.22117 1.02322 0.88246 1.00488 1.24785 0.97417 0.96997 0.95375 1.86482 1.41164 1.33073 1.74333 0.93205 0.87665 0.72987 0.76970 1.21625 1.01067 0.99281 1.00531 1.24002 1.00073 1.01963 0.92464 0.90962 0.93473 0.86888 0.85833 0.88790 0.74341 0.87106 0.88201 0.86701 0.85555 0.75100 1.21814 1.20920 0.82240 0.86726 0.85623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.33 113.37 1.17 1.16 16 2 O -0.35 -0.84 10.33 -148.98 -1.54 -2.38 16 3 C 0.04 0.00 0.85 -10.27 -0.01 -0.01 16 4 C 0.44 1.11 2.52 71.98 0.18 1.29 16 5 F -0.17 -0.37 15.83 44.97 0.71 0.34 16 6 F -0.19 -1.24 17.09 44.97 0.77 -0.48 16 7 F -0.18 -0.42 15.39 44.97 0.69 0.27 16 8 C -0.13 0.01 7.13 31.12 0.22 0.23 16 9 C 0.14 -0.04 4.17 45.52 0.19 0.15 16 10 H 0.12 0.39 7.46 -2.38 -0.02 0.37 16 11 N -0.69 -0.43 5.35 -443.02 -2.37 -2.80 16 12 C 0.61 4.42 7.82 86.75 0.68 5.10 16 13 O -0.56 -8.07 16.52 -3.94 -0.07 -8.13 16 14 C -0.04 -0.22 7.13 42.46 0.30 0.09 16 15 N -0.26 -0.60 11.67 -48.18 -0.56 -1.16 16 16 N -0.26 0.42 3.70 -355.92 -1.32 -0.89 16 17 C 0.08 -0.70 10.13 127.77 1.29 0.60 16 18 C -0.01 0.01 6.18 41.40 0.26 0.26 16 19 C -0.03 0.18 2.87 71.24 0.20 0.38 16 20 O -0.54 4.42 10.39 -148.98 -1.55 2.87 16 21 Si 0.79 -3.36 31.36 68.60 2.15 -1.21 16 22 C -0.20 -0.79 9.35 22.41 0.21 -0.58 16 23 C -0.15 0.66 6.66 31.12 0.21 0.86 16 24 H 0.07 -0.42 6.58 -2.39 -0.02 -0.43 16 25 H 0.05 -0.05 6.63 -2.39 -0.02 -0.07 16 26 H 0.11 -0.53 8.14 -2.38 -0.02 -0.55 16 27 H 0.12 -0.24 7.02 -2.39 -0.02 -0.26 16 28 H 0.09 0.18 8.14 -2.39 -0.02 0.16 16 29 H 0.42 -1.37 8.45 -92.71 -0.78 -2.16 16 30 H 0.11 -1.47 8.14 -2.39 -0.02 -1.49 16 31 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 32 H 0.11 -1.14 6.75 -2.39 -0.02 -1.16 16 33 H 0.13 -0.64 7.96 -2.39 -0.02 -0.66 16 34 H 0.40 -6.09 8.70 -74.06 -0.64 -6.74 16 35 H -0.29 -0.81 6.83 99.48 0.68 -0.13 16 36 H -0.28 -0.42 7.11 99.48 0.71 0.28 16 37 H 0.16 0.74 6.83 -2.91 -0.02 0.72 16 38 H 0.11 -0.77 6.68 -2.39 -0.02 -0.78 16 39 H 0.13 -0.95 8.04 -2.39 -0.02 -0.97 16 Total: 0.00 -20.46 340.39 1.56 -18.90 By element: Atomic # 1 Polarization: -14.59 SS G_CDS: -0.27 Total: -14.86 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: 4.91 Total: 9.53 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -4.25 Total: -4.85 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -3.15 Total: -7.64 kcal Atomic # 9 Polarization: -2.04 SS G_CDS: 2.17 Total: 0.13 kcal Atomic # 14 Polarization: -3.36 SS G_CDS: 2.15 Total: -1.21 kcal Total: -20.46 1.56 -18.90 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16772210_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.095 kcal (2) G-P(sol) polarization free energy of solvation -20.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.557 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds