Wall clock time and date at job start Thu Mar 4 2021 15:58:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86301 * 109.93172 * 2 1 4 4 C 1.87385 * 109.94632 * 121.17190 * 2 1 3 5 5 C 1.53705 * 107.28233 * 164.90461 * 4 2 1 6 6 C 1.52523 * 109.64538 * 300.87449 * 5 4 2 7 7 N 1.46494 * 109.04487 * 197.55625 * 6 5 4 8 8 C 1.34785 * 120.00210 * 155.00440 * 7 6 5 9 9 O 1.21591 * 119.99557 * 359.97438 * 8 7 6 10 10 C 1.47576 * 120.00229 * 179.97438 * 8 7 6 11 11 C 1.36495 * 120.00824 * 180.02562 * 10 8 7 12 12 N 1.35940 * 120.50290 * 179.97438 * 11 10 8 13 13 C 1.36999 * 132.41397 * 179.97438 * 12 11 10 14 14 C 1.50701 * 126.42589 * 0.02562 * 13 12 11 15 15 O 1.42896 * 109.47417 * 330.00365 * 14 13 12 16 16 Si 1.86301 * 109.47149 * 210.00349 * 14 13 12 17 17 H 1.48506 * 109.47302 * 59.99966 * 16 14 13 18 18 H 1.48503 * 109.47334 * 300.00099 * 16 14 13 19 19 H 1.48500 * 109.47376 * 180.02562 * 16 14 13 20 20 C 1.35004 * 107.14687 * 180.28179 * 13 12 11 21 21 N 1.33587 * 108.65456 * 359.57066 * 20 13 12 22 22 C 1.32419 * 109.22142 * 0.43301 * 21 20 13 23 23 C 1.41251 * 132.12097 * 179.70545 * 22 21 20 24 24 Br 1.89102 * 120.24963 * 0.05937 * 23 22 21 25 25 C 1.35702 * 119.49226 * 180.02562 * 23 22 21 26 26 C 1.52519 * 111.65691 * 76.98799 * 6 5 4 27 27 C 1.53715 * 109.64339 * 283.01757 * 26 6 5 28 28 H 1.09003 * 109.47343 * 298.82625 * 1 2 3 29 29 H 1.08998 * 109.47083 * 58.82698 * 1 2 3 30 30 H 1.08997 * 109.47305 * 178.82884 * 1 2 3 31 31 H 1.09008 * 109.46878 * 181.17047 * 3 2 1 32 32 H 1.09001 * 109.46899 * 301.16919 * 3 2 1 33 33 H 1.08999 * 109.47251 * 61.17778 * 3 2 1 34 34 H 1.09000 * 109.89107 * 45.45857 * 4 2 1 35 35 H 1.09004 * 109.95239 * 284.38718 * 4 2 1 36 36 H 1.09008 * 109.44013 * 180.82690 * 5 4 2 37 37 H 1.08994 * 109.44675 * 60.93040 * 5 4 2 38 38 H 1.09004 * 109.04030 * 316.50376 * 6 5 4 39 39 H 0.97001 * 120.00615 * 334.99119 * 7 6 5 40 40 H 1.07998 * 119.74527 * 359.97438 * 11 10 8 41 41 H 1.09002 * 109.46793 * 90.00818 * 14 13 12 42 42 H 0.96708 * 114.00095 * 299.99924 * 15 14 13 43 43 H 1.08000 * 125.67691 * 179.73129 * 20 13 12 44 44 H 1.08006 * 120.23209 * 179.97438 * 25 23 22 45 45 H 1.09003 * 109.43901 * 43.06500 * 26 6 5 46 46 H 1.08994 * 109.44348 * 162.95615 * 26 6 5 47 47 H 1.08999 * 109.88871 * 299.67308 * 27 26 6 48 48 H 1.08999 * 109.88932 * 178.56993 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4981 1.7514 0.0000 4 6 2.5022 -0.9117 1.5071 5 6 3.9900 -1.2107 1.2629 6 6 4.1432 -2.0547 0.0017 7 7 5.4684 -2.6790 0.0023 8 6 5.6761 -3.8202 -0.6841 9 8 4.7633 -4.3317 -1.3035 10 6 7.0113 -4.4488 -0.6840 11 6 7.2219 -5.6042 -1.3796 12 7 8.4478 -6.1916 -1.3867 13 6 8.9248 -7.3273 -1.9863 14 6 8.1410 -8.2775 -2.8546 15 8 6.7718 -8.2772 -2.4458 16 14 8.8399 -9.9959 -2.6827 17 1 8.7465 -10.4289 -1.2653 18 1 10.2629 -9.9964 -3.1076 19 1 8.0680 -10.9322 -3.5387 20 6 10.2273 -7.4386 -1.6489 21 7 10.5575 -6.4029 -0.8724 22 6 9.4940 -5.6339 -0.6959 23 6 9.2995 -4.4385 0.0310 24 35 10.7340 -3.6603 0.9864 25 6 8.0756 -3.8524 0.0379 26 6 3.9901 -1.2128 -1.2609 27 6 2.5022 -0.9141 -1.5055 28 1 -0.3634 0.4955 0.9003 29 1 -0.3633 0.5319 -0.8793 30 1 -0.3634 -1.0274 -0.0210 31 1 3.5879 1.7427 -0.0210 32 1 2.1219 2.2743 -0.8793 33 1 2.1562 2.2619 0.9003 34 1 1.9529 -1.8442 1.6371 35 1 2.3898 -0.2885 2.3943 36 1 4.3952 -1.7558 2.1156 37 1 4.5331 -0.2737 1.1406 38 1 3.3825 -2.8354 0.0017 39 1 6.1966 -2.2711 0.4966 40 1 6.4084 -6.0551 -1.9284 41 1 8.2097 -7.9597 -3.8950 42 1 6.6352 -8.5503 -1.5282 43 1 10.8924 -8.2315 -1.9576 44 1 7.9134 -2.9384 0.5900 45 1 4.5332 -0.2755 -1.1400 46 1 4.3954 -1.7591 -2.1125 47 1 1.9530 -1.8469 -1.6341 48 1 2.3901 -0.2913 -2.3930 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16807780_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:58:46 Heat of formation + Delta-G solvation = -19.874970 kcal Electronic energy + Delta-G solvation = -30446.178597 eV Core-core repulsion = 26285.795496 eV Total energy + Delta-G solvation = -4160.383102 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 425.068 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -44.23063 -41.27124 -38.77114 -38.19316 -37.68732 -35.34423 -34.15814 -32.39167 -32.14465 -31.78018 -30.22856 -29.34171 -28.50815 -27.21594 -26.87635 -25.00080 -24.07800 -23.60177 -22.55161 -21.73927 -21.60553 -19.51667 -18.71974 -18.27983 -17.80553 -17.50971 -17.05760 -16.51557 -16.36177 -16.11965 -15.93030 -15.80083 -15.48140 -15.16416 -15.11259 -14.77954 -14.49934 -14.14191 -14.06798 -13.91257 -13.51319 -13.47273 -13.41491 -13.34642 -13.31295 -13.18745 -13.06484 -12.96358 -12.76161 -12.61796 -12.26654 -12.24871 -12.15352 -11.87569 -11.48972 -11.30641 -11.27055 -11.16972 -10.96765 -10.88499 -10.57511 -10.39565 -10.13792 -9.98766 -9.06213 -0.85852 -0.37092 0.21843 0.79623 1.14305 1.32691 1.33944 1.42825 1.66641 1.76388 1.78853 1.81699 1.87047 2.00586 2.29341 2.53781 2.78997 2.96877 3.14525 3.37292 3.42605 3.47395 3.64005 3.85215 3.94392 4.09463 4.10557 4.21786 4.27123 4.29593 4.40668 4.41054 4.48938 4.53633 4.66595 4.67003 4.70172 4.71194 4.72130 4.79560 4.97577 5.00646 5.11744 5.19131 5.25026 5.27397 5.33726 5.39358 5.48824 5.51893 5.60531 6.15739 6.28603 6.52842 7.00295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.448 4.448 2 Si 0.991 3.009 3 C -0.446 4.446 4 C -0.402 4.402 5 C -0.117 4.117 6 C 0.137 3.863 7 N -0.719 5.719 8 C 0.576 3.424 9 O -0.525 6.525 10 C -0.173 4.173 11 C 0.163 3.837 12 N -0.353 5.353 13 C -0.086 4.086 14 C -0.052 4.052 15 O -0.540 6.540 16 Si 0.973 3.027 17 H -0.247 1.247 18 H -0.243 1.243 19 H -0.244 1.244 20 C 0.042 3.958 21 N -0.461 5.461 22 C 0.244 3.756 23 C -0.063 4.063 24 Br 0.008 6.992 25 C -0.041 4.041 26 C -0.118 4.118 27 C -0.403 4.403 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.068 0.932 32 H 0.069 0.931 33 H 0.069 0.931 34 H 0.079 0.921 35 H 0.081 0.919 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.094 0.906 39 H 0.400 0.600 40 H 0.196 0.804 41 H 0.128 0.872 42 H 0.379 0.621 43 H 0.191 0.809 44 H 0.154 0.846 45 H 0.066 0.934 46 H 0.068 0.932 47 H 0.079 0.921 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.707 1.501 1.358 2.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.556 4.556 2 Si 1.187 2.813 3 C -0.554 4.554 4 C -0.488 4.488 5 C -0.155 4.155 6 C 0.033 3.967 7 N -0.370 5.370 8 C 0.361 3.639 9 O -0.402 6.402 10 C -0.180 4.180 11 C 0.037 3.963 12 N -0.026 5.026 13 C -0.197 4.197 14 C -0.162 4.162 15 O -0.344 6.344 16 Si 0.791 3.209 17 H -0.170 1.170 18 H -0.166 1.166 19 H -0.167 1.167 20 C -0.108 4.108 21 N -0.179 5.179 22 C -0.002 4.002 23 C -0.146 4.146 24 Br 0.093 6.907 25 C -0.067 4.067 26 C -0.156 4.156 27 C -0.489 4.489 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.098 0.902 35 H 0.100 0.900 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.112 0.888 39 H 0.235 0.765 40 H 0.213 0.787 41 H 0.145 0.855 42 H 0.227 0.773 43 H 0.208 0.792 44 H 0.172 0.828 45 H 0.084 0.916 46 H 0.087 0.913 47 H 0.098 0.902 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.778 0.852 1.029 1.546 hybrid contribution -0.656 0.328 0.167 0.752 sum -1.434 1.180 1.196 2.209 Atomic orbital electron populations 1.26076 1.20487 1.04563 1.04456 0.79667 0.67110 0.67346 0.67187 1.26094 1.06269 1.18505 1.04487 1.26203 0.99274 1.08588 1.14780 1.21470 0.97632 0.99931 0.96457 1.21140 0.84128 0.96111 0.95277 1.45990 1.13838 1.25188 1.52004 1.17487 0.86399 0.80649 0.79350 1.90860 1.43454 1.63190 1.42727 1.19312 0.95666 0.97919 1.05109 1.22200 0.86937 0.92109 0.95043 1.42616 1.08930 1.17852 1.33235 1.22088 0.97075 0.92151 1.08406 1.24872 0.84712 1.06938 0.99644 1.86523 1.22813 1.90894 1.34209 0.85406 0.80289 0.73025 0.82212 1.17024 1.16580 1.16668 1.22523 0.92551 0.98442 0.97320 1.70862 1.24131 1.04530 1.18410 1.20440 0.84075 0.96650 0.99029 1.20448 0.95472 0.95362 1.03301 1.96858 1.42955 1.79727 1.71130 1.21100 0.89763 0.99336 0.96540 1.21570 0.96931 0.99701 0.97394 1.26236 0.99805 1.08434 1.14460 0.91230 0.91196 0.91131 0.91245 0.91203 0.91218 0.90210 0.90024 0.91000 0.90975 0.88793 0.76450 0.78721 0.85483 0.77295 0.79209 0.82810 0.91560 0.91319 0.90239 0.90372 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.82 8.65 101.05 0.87 1.69 16 2 Si 0.99 -3.26 11.60 -169.99 -1.97 -5.23 16 3 C -0.45 1.06 8.65 101.05 0.87 1.93 16 4 C -0.40 1.18 4.98 37.52 0.19 1.36 16 5 C -0.12 0.35 5.05 -26.61 -0.13 0.21 16 6 C 0.14 -0.19 2.03 -68.42 -0.14 -0.33 16 7 N -0.72 1.16 5.00 -55.31 -0.28 0.89 16 8 C 0.58 0.50 7.52 -12.45 -0.09 0.40 16 9 O -0.53 -2.20 15.94 5.29 0.08 -2.11 16 10 C -0.17 -0.02 5.84 -105.37 -0.61 -0.64 16 11 C 0.16 0.13 9.91 -16.36 -0.16 -0.04 16 12 N -0.35 -0.57 2.93 -58.09 -0.17 -0.74 16 13 C -0.09 -0.05 6.25 -81.43 -0.51 -0.56 16 14 C -0.05 0.09 3.06 36.01 0.11 0.20 16 15 O -0.54 0.61 10.90 -35.23 -0.38 0.22 16 16 Si 0.97 -2.21 26.59 -169.99 -4.52 -6.73 16 17 H -0.25 0.33 7.11 56.52 0.40 0.73 16 18 H -0.24 0.57 6.84 56.52 0.39 0.95 16 19 H -0.24 0.25 7.11 56.52 0.40 0.65 16 20 C 0.04 0.06 10.44 -17.94 -0.19 -0.13 16 21 N -0.46 -1.82 11.30 -12.70 -0.14 -1.96 16 22 C 0.24 0.73 7.59 -155.91 -1.18 -0.45 16 23 C -0.06 -0.09 6.24 -39.35 -0.25 -0.33 16 24 Br 0.01 0.01 33.72 -68.01 -2.29 -2.28 16 25 C -0.04 0.03 9.26 -39.15 -0.36 -0.33 16 26 C -0.12 0.12 5.18 -26.61 -0.14 -0.02 16 27 C -0.40 0.62 4.98 37.53 0.19 0.81 16 28 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 31 H 0.07 -0.17 7.96 -51.92 -0.41 -0.59 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 33 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 34 H 0.08 -0.20 7.99 -51.93 -0.41 -0.62 16 35 H 0.08 -0.26 7.99 -51.93 -0.41 -0.68 16 36 H 0.07 -0.22 8.13 -51.92 -0.42 -0.64 16 37 H 0.07 -0.29 7.69 -51.93 -0.40 -0.69 16 38 H 0.09 0.02 7.34 -51.93 -0.38 -0.36 16 39 H 0.40 -1.67 6.62 -40.82 -0.27 -1.94 16 40 H 0.20 0.11 6.19 -52.49 -0.32 -0.22 16 41 H 0.13 -0.33 7.96 -51.93 -0.41 -0.75 16 42 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 43 H 0.19 -0.26 6.71 -52.49 -0.35 -0.61 16 44 H 0.15 -0.61 6.44 -52.48 -0.34 -0.95 16 45 H 0.07 -0.15 7.69 -51.93 -0.40 -0.55 16 46 H 0.07 0.08 7.92 -51.93 -0.41 -0.34 16 47 H 0.08 -0.06 7.99 -51.93 -0.41 -0.47 16 48 H 0.08 -0.12 7.99 -51.93 -0.41 -0.54 16 LS Contribution 405.79 15.07 6.12 6.12 Total: 0.00 -8.02 405.79 -11.36 -19.38 By element: Atomic # 1 Polarization: -5.08 SS G_CDS: -6.27 Total: -11.35 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: -1.54 Total: 3.79 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -0.59 Total: -1.81 kcal Atomic # 8 Polarization: -1.59 SS G_CDS: -0.30 Total: -1.89 kcal Atomic # 14 Polarization: -5.47 SS G_CDS: -6.49 Total: -11.96 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -8.02 -11.36 -19.38 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16807780_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.492 kcal (2) G-P(sol) polarization free energy of solvation -8.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.383 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds