Wall clock time and date at job start Thu Mar 4 2021 16:58:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34231 * 117.00170 * 2 1 4 4 O 1.20825 * 120.00069 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99946 * 180.02562 * 3 2 1 6 6 C 1.52993 * 109.46980 * 180.02562 * 5 3 2 7 7 H 1.09001 * 109.47577 * 54.99228 * 6 5 3 8 8 C 1.53004 * 109.47189 * 174.99681 * 6 5 3 9 9 C 1.53005 * 109.47111 * 179.97438 * 8 6 5 10 10 C 1.53003 * 109.46962 * 300.00004 * 9 8 6 11 11 H 1.09001 * 109.46850 * 300.00036 * 10 9 8 12 12 C 1.53005 * 109.46962 * 179.97438 * 10 9 8 13 13 N 1.46493 * 109.46899 * 174.99899 * 12 10 9 14 14 C 1.34782 * 119.99902 * 180.02562 * 13 12 10 15 15 O 1.21567 * 119.99800 * 359.97438 * 14 13 12 16 16 C 1.47707 * 119.99982 * 180.02562 * 14 13 12 17 17 N 1.31811 * 126.52272 * 0.02562 * 16 14 13 18 18 N 1.28465 * 110.07556 * 179.97438 * 17 16 14 19 19 C 1.46499 * 124.88399 * 179.97438 * 18 17 16 20 20 C 1.35034 * 110.22852 * 0.22725 * 18 17 16 21 21 C 1.50706 * 126.38267 * 179.73859 * 20 18 17 22 22 O 1.42901 * 109.46870 * 30.00072 * 21 20 18 23 23 Si 1.86300 * 109.47108 * 149.99842 * 21 20 18 24 24 C 1.35368 * 107.23277 * 359.63286 * 20 18 17 25 25 C 1.53004 * 109.47211 * 60.00057 * 10 9 8 26 26 C 1.52995 * 109.47138 * 299.99933 * 25 10 9 27 27 H 1.08993 * 109.47107 * 300.00412 * 1 2 3 28 28 H 1.09001 * 109.46832 * 60.00250 * 1 2 3 29 29 H 1.08997 * 109.47119 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47364 * 59.99557 * 5 3 2 31 31 H 1.09008 * 109.46712 * 299.99501 * 5 3 2 32 32 H 1.09002 * 109.46633 * 59.99797 * 8 6 5 33 33 H 1.08993 * 109.46830 * 299.99447 * 8 6 5 34 34 H 1.09001 * 109.46876 * 180.02562 * 9 8 6 35 35 H 1.08996 * 109.46921 * 59.99700 * 9 8 6 36 36 H 1.09002 * 109.46620 * 54.99844 * 12 10 9 37 37 H 1.08994 * 109.46895 * 295.00050 * 12 10 9 38 38 H 0.97003 * 120.00409 * 0.02562 * 13 12 10 39 39 H 1.09002 * 109.47391 * 90.01884 * 19 18 17 40 40 H 1.09001 * 109.46813 * 330.01941 * 19 18 17 41 41 H 1.09004 * 109.47041 * 210.02068 * 19 18 17 42 42 H 1.08991 * 109.47088 * 269.99844 * 21 20 18 43 43 H 0.96704 * 114.00216 * 60.00202 * 22 21 20 44 44 H 1.48505 * 109.99762 * 58.68199 * 23 21 20 45 45 H 1.48496 * 109.99932 * 180.02562 * 23 21 20 46 46 H 1.07996 * 127.24590 * 180.09267 * 24 20 18 47 47 H 1.08995 * 109.46792 * 60.00131 * 25 10 9 48 48 H 1.08995 * 109.46650 * 179.97438 * 25 10 9 49 49 H 1.09007 * 109.47056 * 299.99907 * 26 25 10 50 50 H 1.09001 * 109.46903 * 179.97438 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7419 0.0002 7 1 3.5383 3.2571 0.8424 8 6 5.5230 2.8235 0.1254 9 6 5.9568 4.2907 0.1255 10 6 5.5164 4.9529 -1.1816 11 1 5.9783 4.4374 -2.0236 12 6 5.9497 6.4203 -1.1812 13 7 5.6348 7.0228 -2.4788 14 6 5.9297 8.3174 -2.7101 15 8 6.4566 8.9853 -1.8417 16 6 5.6116 8.9250 -4.0183 17 7 5.0429 8.3245 -5.0447 18 7 4.9144 9.1485 -6.0218 19 6 4.3230 8.8212 -7.3216 20 6 5.4079 10.3582 -5.6805 21 6 5.4468 11.5864 -6.5530 22 8 4.3453 11.5593 -7.4629 23 14 5.3339 13.1097 -5.4864 24 6 5.8590 10.2628 -4.4078 25 6 3.9937 4.8713 -1.3068 26 6 3.5598 3.4042 -1.3069 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.9558 0.7808 -0.8907 31 1 3.9565 0.7805 0.8893 32 1 5.9848 2.3084 -0.7169 33 1 5.8367 2.3514 1.0564 34 1 7.0417 4.3488 0.2143 35 1 5.4949 4.8061 0.9675 36 1 7.0233 6.4820 -1.0028 37 1 5.4192 6.9555 -0.3937 38 1 5.2140 6.4900 -3.1717 39 1 3.2505 9.0138 -7.2917 40 1 4.4970 7.7686 -7.5451 41 1 4.7814 9.4376 -8.0949 42 1 6.3811 11.6041 -7.1139 43 1 3.4796 11.5426 -7.0323 44 1 6.4562 13.1333 -4.5142 45 1 5.3706 14.3278 -6.3350 46 1 6.3156 11.0422 -3.8159 47 1 3.5318 5.3868 -0.4648 48 1 3.6800 5.3435 -2.2378 49 1 4.0218 2.8888 -2.1490 50 1 2.4750 3.3462 -1.3957 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16902906_13259642.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:58:28 Heat of formation + Delta-G solvation = -89.381619 kcal Electronic energy + Delta-G solvation = -31147.748904 eV Core-core repulsion = 26756.851532 eV Total energy + Delta-G solvation = -4390.897371 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.87414 -41.66711 -40.75526 -39.62208 -38.02962 -37.59424 -36.18646 -34.48325 -33.69867 -32.60464 -31.65599 -30.26125 -28.77531 -28.02294 -26.82225 -25.77728 -24.04217 -23.62661 -22.39461 -22.19990 -21.37247 -20.98178 -20.56916 -19.18083 -18.56689 -17.64187 -17.60524 -17.58109 -17.45654 -17.17414 -16.86341 -16.50913 -16.04040 -15.73229 -15.63039 -15.30660 -15.11873 -15.07237 -15.00047 -14.82371 -14.39853 -14.25852 -14.02439 -13.78066 -13.53455 -13.45439 -13.38732 -13.04887 -12.93058 -12.69514 -12.61664 -12.54062 -12.37693 -12.02141 -11.88399 -11.86749 -11.78041 -11.64455 -11.46198 -11.38209 -11.03601 -10.94336 -10.81856 -10.35430 -10.03853 -9.99285 -4.97963 0.40719 0.78245 1.18145 1.18918 1.53351 1.70152 1.80382 1.95937 2.11472 2.25820 3.17192 3.30022 3.34206 3.53286 3.67906 3.75157 3.85564 3.96314 4.01068 4.16035 4.24936 4.28561 4.28895 4.31088 4.34620 4.40330 4.46676 4.47700 4.51513 4.54249 4.59043 4.62067 4.66342 4.68338 4.69377 4.73076 4.79327 4.83078 4.98606 5.11958 5.17270 5.18415 5.23491 5.26914 5.31839 5.37268 5.41046 5.54489 5.60595 5.65678 6.33947 6.55447 6.73984 6.78979 7.07422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.369 6.369 3 C 0.454 3.546 4 O -0.536 6.536 5 C -0.108 4.108 6 C -0.074 4.074 7 H 0.063 0.937 8 C -0.106 4.106 9 C -0.111 4.111 10 C -0.087 4.087 11 H 0.089 0.911 12 C 0.123 3.877 13 N -0.704 5.704 14 C 0.600 3.400 15 O -0.572 6.572 16 C -0.039 4.039 17 N -0.260 5.260 18 N -0.258 5.258 19 C 0.076 3.924 20 C -0.006 4.006 21 C -0.034 4.034 22 O -0.543 6.543 23 Si 0.786 3.214 24 C -0.198 4.198 25 C -0.109 4.109 26 C -0.118 4.118 27 H 0.058 0.942 28 H 0.059 0.941 29 H 0.126 0.874 30 H 0.127 0.873 31 H 0.127 0.873 32 H 0.079 0.921 33 H 0.079 0.921 34 H 0.076 0.924 35 H 0.061 0.939 36 H 0.067 0.933 37 H 0.060 0.940 38 H 0.414 0.586 39 H 0.110 0.890 40 H 0.099 0.901 41 H 0.116 0.884 42 H 0.129 0.871 43 H 0.398 0.602 44 H -0.292 1.292 45 H -0.280 1.280 46 H 0.159 0.841 47 H 0.051 0.949 48 H 0.060 0.940 49 H 0.072 0.928 50 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.668 -4.627 -3.938 6.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.299 3.701 4 O -0.426 6.426 5 C -0.145 4.145 6 C -0.093 4.093 7 H 0.081 0.919 8 C -0.144 4.144 9 C -0.149 4.149 10 C -0.106 4.106 11 H 0.108 0.892 12 C 0.000 4.000 13 N -0.356 5.356 14 C 0.386 3.614 15 O -0.450 6.450 16 C -0.196 4.196 17 N -0.098 5.098 18 N -0.047 5.047 19 C -0.062 4.062 20 C -0.131 4.131 21 C -0.145 4.145 22 O -0.350 6.350 23 Si 0.690 3.310 24 C -0.226 4.226 25 C -0.147 4.147 26 C -0.156 4.156 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.145 0.855 30 H 0.145 0.855 31 H 0.145 0.855 32 H 0.098 0.902 33 H 0.098 0.902 34 H 0.095 0.905 35 H 0.080 0.920 36 H 0.085 0.915 37 H 0.078 0.922 38 H 0.251 0.749 39 H 0.128 0.872 40 H 0.118 0.882 41 H 0.135 0.865 42 H 0.146 0.854 43 H 0.249 0.751 44 H -0.219 1.219 45 H -0.206 1.206 46 H 0.177 0.823 47 H 0.070 0.930 48 H 0.079 0.921 49 H 0.091 0.909 50 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -2.180 -4.221 -3.963 6.187 hybrid contribution 0.130 0.299 -0.115 0.346 sum -2.050 -3.922 -4.078 6.018 Atomic orbital electron populations 1.23463 0.75349 1.05395 1.02250 1.86517 1.24582 1.33650 1.83844 1.24541 0.93541 0.80826 0.71149 1.90654 1.68262 1.37156 1.46535 1.21645 0.85162 0.99814 1.07853 1.21004 0.96807 0.92828 0.98651 0.91893 1.21532 0.93031 0.96227 1.03575 1.21495 1.01564 0.95823 0.96058 1.21361 0.96049 0.92855 1.00292 0.89230 1.21536 1.00677 0.93820 0.83985 1.45813 1.61844 1.10338 1.17583 1.17085 0.77664 0.82041 0.84654 1.90784 1.45137 1.62980 1.46097 1.21749 1.08441 0.94637 0.94814 1.73472 1.18605 1.21328 0.96430 1.45729 1.40977 1.05662 1.12353 1.22682 1.00900 1.04856 0.77746 1.22136 1.04270 0.90563 0.96147 1.24791 0.93717 0.99455 0.96544 1.86477 1.17180 1.96762 1.34584 0.93171 0.88239 0.72586 0.77005 1.21618 1.08135 0.97395 0.95492 1.21517 0.94827 0.96741 1.01571 1.21680 1.01010 0.95471 0.97409 0.92284 0.92201 0.85543 0.85548 0.85516 0.90201 0.90225 0.90511 0.92046 0.91502 0.92210 0.74879 0.87204 0.88221 0.86546 0.85419 0.75120 1.21906 1.20631 0.82305 0.92975 0.92118 0.90949 0.92561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.37 -0.93 10.57 -51.43 -0.54 -1.47 16 3 C 0.45 1.40 7.68 71.24 0.55 1.94 16 4 O -0.54 -5.06 13.71 21.97 0.30 -4.76 16 5 C -0.11 0.47 5.29 29.85 0.16 0.62 16 6 C -0.07 0.19 1.84 -10.79 -0.02 0.17 16 7 H 0.06 0.10 7.96 -2.39 -0.02 0.08 16 8 C -0.11 0.63 5.20 30.60 0.16 0.79 16 9 C -0.11 0.42 5.20 30.60 0.16 0.58 16 10 C -0.09 0.21 2.23 -10.79 -0.02 0.18 16 11 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 12 C 0.12 0.31 5.06 86.38 0.44 0.75 16 13 N -0.70 -3.25 5.28 -466.11 -2.46 -5.71 16 14 C 0.60 6.60 7.82 86.74 0.68 7.28 16 15 O -0.57 -10.31 16.93 -3.93 -0.07 -10.38 16 16 C -0.04 -0.33 7.13 42.46 0.30 -0.03 16 17 N -0.26 -1.31 11.67 -48.17 -0.56 -1.87 16 18 N -0.26 -0.10 3.70 -355.91 -1.32 -1.42 16 19 C 0.08 -0.57 10.13 127.77 1.29 0.72 16 20 C -0.01 0.00 6.18 41.41 0.26 0.25 16 21 C -0.03 0.13 2.87 71.24 0.20 0.33 16 22 O -0.54 3.75 10.39 -148.98 -1.55 2.20 16 23 Si 0.79 -2.33 31.36 68.60 2.15 -0.18 16 24 C -0.20 -1.26 9.35 22.41 0.21 -1.05 16 25 C -0.11 0.02 5.08 30.59 0.16 0.18 16 26 C -0.12 0.06 4.94 30.59 0.15 0.21 16 27 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 28 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 29 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 30 H 0.13 -1.02 8.14 -2.39 -0.02 -1.04 16 31 H 0.13 -1.02 8.14 -2.38 -0.02 -1.04 16 32 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 33 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 34 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 35 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 36 H 0.07 0.25 8.14 -2.39 -0.02 0.23 16 37 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 38 H 0.41 0.53 7.38 -92.71 -0.68 -0.16 16 39 H 0.11 -1.27 8.14 -2.39 -0.02 -1.29 16 40 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 41 H 0.12 -1.01 6.75 -2.38 -0.02 -1.03 16 42 H 0.13 -0.51 7.96 -2.39 -0.02 -0.53 16 43 H 0.40 -5.54 8.70 -74.05 -0.64 -6.18 16 44 H -0.29 -1.23 6.83 99.48 0.68 -0.55 16 45 H -0.28 -0.66 7.11 99.48 0.71 0.05 16 46 H 0.16 1.10 6.83 -2.91 -0.02 1.08 16 47 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 48 H 0.06 0.00 7.18 -2.39 -0.02 -0.01 16 49 H 0.07 -0.22 8.14 -2.38 -0.02 -0.24 16 50 H 0.06 0.27 5.95 -2.39 -0.01 0.26 16 Total: 0.00 -24.79 403.09 1.46 -23.32 By element: Atomic # 1 Polarization: -13.48 SS G_CDS: -0.36 Total: -13.84 kcal Atomic # 6 Polarization: 8.24 SS G_CDS: 5.87 Total: 14.11 kcal Atomic # 7 Polarization: -4.66 SS G_CDS: -4.34 Total: -9.00 kcal Atomic # 8 Polarization: -12.55 SS G_CDS: -1.86 Total: -14.41 kcal Atomic # 14 Polarization: -2.33 SS G_CDS: 2.15 Total: -0.18 kcal Total: -24.79 1.46 -23.32 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16902906_13259642.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.059 kcal (2) G-P(sol) polarization free energy of solvation -24.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds