Wall clock time and date at job start Thu Mar 4 2021 17:21:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.43204 * 179.97438 * 2 1 4 4 C 1.39939 * 120.60326 * 130.35154 * 3 2 1 5 5 C 1.38412 * 118.34650 * 180.26094 * 4 3 2 6 6 C 1.38281 * 119.46109 * 359.75200 * 5 4 3 7 7 N 1.31938 * 121.18642 * 0.02562 * 6 5 4 8 8 C 1.32172 * 121.81187 * 359.97438 * 7 6 5 9 9 O 1.35471 * 119.80356 * 179.97438 * 8 7 6 10 10 C 1.42901 * 117.00140 * 0.02562 * 9 8 7 11 11 H 1.08999 * 109.47159 * 329.99813 * 10 9 8 12 12 C 1.53001 * 109.47328 * 89.99925 * 10 9 8 13 13 C 1.52995 * 109.46959 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47249 * 299.99659 * 13 12 10 15 15 H 1.09004 * 109.47405 * 300.00703 * 14 13 12 16 16 N 1.46503 * 109.47248 * 180.02562 * 14 13 12 17 17 C 1.34773 * 120.00348 * 85.00214 * 16 14 13 18 18 O 1.21592 * 119.99657 * 0.02562 * 17 16 14 19 19 C 1.47570 * 120.00016 * 179.97438 * 17 16 14 20 20 C 1.36505 * 120.00868 * 179.97438 * 19 17 16 21 21 N 1.35942 * 120.50565 * 180.02562 * 20 19 17 22 22 C 1.36999 * 132.40915 * 179.97438 * 21 20 19 23 23 C 1.50699 * 126.42901 * 0.02562 * 22 21 20 24 24 O 1.42896 * 109.46997 * 29.97439 * 23 22 21 25 25 Si 1.86305 * 109.46810 * 149.97272 * 23 22 21 26 26 C 1.35011 * 107.14060 * 180.02562 * 22 21 20 27 27 N 1.33579 * 108.65481 * 0.02562 * 26 22 21 28 28 C 1.32419 * 109.22615 * 359.97438 * 27 26 22 29 29 C 1.41255 * 132.11851 * 179.97438 * 28 27 26 30 30 Br 1.89100 * 120.25582 * 0.02562 * 29 28 27 31 31 C 1.35702 * 119.48381 * 180.27767 * 29 28 27 32 32 C 1.53001 * 109.46862 * 60.00282 * 14 13 12 33 33 C 1.52997 * 109.47163 * 210.00386 * 10 9 8 34 34 H 1.08002 * 120.82651 * 0.02562 * 4 3 2 35 35 H 1.08004 * 120.27121 * 179.76757 * 5 4 3 36 36 H 1.07997 * 119.40389 * 179.97438 * 6 5 4 37 37 H 1.09006 * 109.46976 * 300.00227 * 12 10 9 38 38 H 1.08999 * 109.47092 * 59.99847 * 12 10 9 39 39 H 1.09004 * 109.47076 * 180.02562 * 13 12 10 40 40 H 1.08999 * 109.47586 * 59.99852 * 13 12 10 41 41 H 0.97001 * 119.99415 * 265.00006 * 16 14 13 42 42 H 1.08003 * 119.74305 * 0.04139 * 20 19 17 43 43 H 1.08995 * 109.46908 * 269.96910 * 23 22 21 44 44 H 0.96701 * 114.00158 * 179.97438 * 24 23 22 45 45 H 1.48497 * 109.99831 * 178.68205 * 25 23 22 46 46 H 1.48504 * 110.00039 * 299.99712 * 25 23 22 47 47 H 1.07998 * 125.66776 * 179.97438 * 26 22 21 48 48 H 1.08007 * 120.22746 * 179.70669 * 31 29 28 49 49 H 1.08999 * 109.47092 * 60.00346 * 32 14 13 50 50 H 1.09006 * 109.46976 * 179.97438 * 32 14 13 51 51 H 1.08991 * 109.47396 * 59.99369 * 33 10 9 52 52 H 1.09005 * 109.47160 * 299.99362 * 33 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2801 0.7808 -0.9179 5 6 4.6631 0.7419 -0.8800 6 6 5.2957 -0.0542 0.0572 7 7 4.6045 -0.7785 0.9165 8 6 3.2828 -0.7780 0.9235 9 8 2.6140 -1.5379 1.8238 10 6 3.4009 -2.3110 2.7322 11 1 4.3421 -2.5847 2.2554 12 6 3.6867 -1.4864 3.9889 13 6 4.5297 -2.3139 4.9610 14 6 3.7660 -3.5825 5.3462 15 1 2.8247 -3.3092 5.8232 16 7 4.5730 -4.3746 6.2776 17 6 4.5357 -4.1066 7.5979 18 8 3.8319 -3.2076 8.0161 19 6 5.3482 -4.9049 8.5361 20 6 5.3110 -4.6333 9.8733 21 7 6.0558 -5.3619 10.7465 22 6 6.2038 -5.3038 12.1072 23 6 5.5200 -4.3390 13.0414 24 8 4.2464 -3.9771 12.5038 25 14 5.2858 -5.1453 14.7045 26 6 7.0771 -6.2731 12.4543 27 7 7.4634 -6.9160 11.3489 28 6 6.8574 -6.3818 10.2996 29 6 6.9123 -6.6808 8.9201 30 35 8.0139 -8.0838 8.2924 31 6 6.1724 -5.9501 8.0484 32 6 3.4802 -4.4071 4.0895 33 6 2.6367 -3.5793 3.1171 34 1 2.7633 1.3950 -1.6405 35 1 5.2436 1.3288 -1.5765 36 1 6.3749 -0.0841 0.0857 37 1 4.2312 -0.5828 3.7145 38 1 2.7454 -1.2127 4.4656 39 1 4.7329 -1.7266 5.8566 40 1 5.4709 -2.5873 4.4841 41 1 5.1342 -5.0920 5.9440 42 1 4.6849 -3.8335 10.2404 43 1 6.1341 -3.4455 13.1541 44 1 3.7489 -3.3570 13.0543 45 1 4.6412 -4.1932 15.6442 46 1 4.4501 -6.3649 14.5644 47 1 7.4089 -6.4918 13.4585 48 1 6.2089 -6.1653 6.9906 49 1 4.4214 -4.6804 3.6126 50 1 2.9365 -5.3111 4.3640 51 1 2.4331 -4.1667 2.2219 52 1 1.6954 -3.3057 3.5940 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16903866_12335884.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:21:43 Heat of formation + Delta-G solvation = 66.829707 kcal Electronic energy + Delta-G solvation = -41054.007383 eV Core-core repulsion = 35647.624705 eV Total energy + Delta-G solvation = -5406.382678 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 498.074 amu Computer time = 2.18 seconds Orbital eigenvalues (eV) -44.24310 -41.99690 -41.38414 -39.95894 -38.63417 -38.16426 -37.87887 -37.73472 -35.54499 -34.96656 -33.73253 -32.72059 -32.01199 -31.93102 -31.72822 -30.29420 -29.67714 -26.89750 -25.91473 -25.66663 -24.63957 -24.08869 -23.89944 -23.00217 -22.43151 -21.73199 -21.24184 -20.28316 -19.40991 -19.19773 -18.81537 -18.72994 -18.00595 -17.90192 -17.45790 -17.26907 -16.93029 -16.48003 -16.29165 -16.19157 -16.08934 -15.87861 -15.57958 -15.41461 -15.24520 -15.05630 -14.91111 -14.77485 -14.60219 -14.42223 -14.29902 -14.16289 -14.12925 -13.96938 -13.86014 -13.40980 -13.36517 -13.33007 -13.15078 -13.05277 -12.97992 -12.87593 -12.76161 -12.23743 -12.17385 -12.13640 -11.59187 -11.56801 -11.48834 -11.36719 -11.32546 -11.23107 -10.97728 -10.91446 -10.73269 -10.29250 -9.99459 -9.59356 -9.04802 -4.96020 -0.89977 -0.42185 -0.37555 0.19468 0.21849 0.94717 1.17533 1.38790 1.50516 1.62555 1.76329 1.78994 1.88886 1.95302 1.99953 2.22085 2.71213 2.78024 2.79487 2.94885 3.15470 3.27132 3.37969 3.41035 3.50781 3.56037 3.58625 3.76444 3.91449 3.94048 3.96098 4.02751 4.10320 4.13950 4.18061 4.27113 4.28399 4.30858 4.32228 4.38545 4.44313 4.48193 4.50092 4.58126 4.75243 4.84642 4.94433 4.97998 4.99500 5.04022 5.06122 5.09406 5.15793 5.20237 5.31137 5.36119 5.44928 5.56893 6.09554 6.29746 6.36269 6.40105 6.47818 6.71132 6.95972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.465 5.465 2 C 0.284 3.716 3 C -0.129 4.129 4 C 0.014 3.986 5 C -0.198 4.198 6 C 0.173 3.827 7 N -0.549 5.549 8 C 0.357 3.643 9 O -0.315 6.315 10 C 0.090 3.910 11 H 0.105 0.895 12 C -0.125 4.125 13 C -0.116 4.116 14 C 0.144 3.856 15 H 0.072 0.928 16 N -0.700 5.700 17 C 0.580 3.420 18 O -0.566 6.566 19 C -0.173 4.173 20 C 0.163 3.837 21 N -0.360 5.360 22 C -0.053 4.053 23 C -0.055 4.055 24 O -0.565 6.565 25 Si 0.809 3.191 26 C 0.041 3.959 27 N -0.490 5.490 28 C 0.221 3.779 29 C -0.080 4.080 30 Br 0.009 6.991 31 C -0.024 4.024 32 C -0.112 4.112 33 C -0.114 4.114 34 H 0.173 0.827 35 H 0.185 0.815 36 H 0.202 0.798 37 H 0.068 0.932 38 H 0.056 0.944 39 H 0.056 0.944 40 H 0.089 0.911 41 H 0.417 0.583 42 H 0.185 0.815 43 H 0.110 0.890 44 H 0.406 0.594 45 H -0.271 1.271 46 H -0.308 1.308 47 H 0.230 0.770 48 H 0.189 0.811 49 H 0.100 0.900 50 H 0.092 0.908 51 H 0.085 0.915 52 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.012 2.104 -2.561 9.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.142 5.142 2 C -0.031 4.031 3 C -0.136 4.136 4 C -0.014 4.014 5 C -0.218 4.218 6 C 0.017 3.983 7 N -0.272 5.272 8 C 0.176 3.824 9 O -0.222 6.222 10 C 0.035 3.965 11 H 0.123 0.877 12 C -0.164 4.164 13 C -0.154 4.154 14 C 0.040 3.960 15 H 0.090 0.910 16 N -0.351 5.351 17 C 0.367 3.633 18 O -0.446 6.446 19 C -0.181 4.181 20 C 0.037 3.963 21 N -0.033 5.033 22 C -0.164 4.164 23 C -0.163 4.163 24 O -0.377 6.377 25 Si 0.710 3.290 26 C -0.108 4.108 27 N -0.209 5.209 28 C -0.024 4.024 29 C -0.163 4.163 30 Br 0.094 6.906 31 C -0.050 4.050 32 C -0.150 4.150 33 C -0.152 4.152 34 H 0.190 0.810 35 H 0.202 0.798 36 H 0.218 0.782 37 H 0.087 0.913 38 H 0.075 0.925 39 H 0.075 0.925 40 H 0.108 0.892 41 H 0.256 0.744 42 H 0.202 0.798 43 H 0.127 0.873 44 H 0.258 0.742 45 H -0.197 1.197 46 H -0.236 1.236 47 H 0.247 0.753 48 H 0.206 0.794 49 H 0.118 0.882 50 H 0.110 0.890 51 H 0.103 0.897 52 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 7.489 0.351 -1.626 7.672 hybrid contribution -1.853 2.000 -0.552 2.782 sum 5.636 2.351 -2.179 6.484 Atomic orbital electron populations 1.81281 1.13375 1.09990 1.09573 1.25549 0.92538 0.92501 0.92527 1.16145 0.84448 1.08528 1.04443 1.21926 0.94925 0.91565 0.92935 1.22392 0.93827 1.03065 1.02488 1.23464 1.01965 0.86588 0.86329 1.67497 1.05066 1.26254 1.28399 1.19856 0.88163 0.87714 0.86687 1.86288 1.36634 1.55786 1.43451 1.22638 0.95731 0.90247 0.87895 0.87682 1.21822 1.00428 0.98997 0.95144 1.21763 0.99431 0.95582 0.98648 1.21092 0.94181 0.91134 0.89576 0.90986 1.45718 1.47214 1.37234 1.04977 1.17544 0.80638 0.82357 0.82808 1.90840 1.42482 1.32948 1.78368 1.19268 1.04622 1.01753 0.92442 1.22159 0.91155 0.94106 0.88903 1.42719 1.29345 1.23584 1.07629 1.21455 1.08098 1.06275 0.80535 1.24790 0.85685 1.01050 1.04752 1.86440 1.30898 1.68810 1.51556 0.93620 0.88100 0.76225 0.71038 1.22979 0.96280 0.91807 0.99709 1.70839 1.25348 1.27514 0.97203 1.20759 0.95543 0.90896 0.95225 1.20580 1.04493 1.01411 0.89790 1.96830 1.64617 1.43283 1.85846 1.21368 0.91121 0.90900 1.01616 1.21723 1.02218 0.98112 0.92940 1.21573 0.99045 0.94155 1.00400 0.81005 0.79776 0.78154 0.91307 0.92520 0.92484 0.89225 0.74373 0.79766 0.87280 0.74167 1.19715 1.23594 0.75344 0.79385 0.88175 0.88969 0.89662 0.91690 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -6.29 18.54 19.00 0.35 -5.94 16 2 C 0.28 2.15 14.91 88.33 1.32 3.47 16 3 C -0.13 -0.13 5.77 -21.10 -0.12 -0.25 16 4 C 0.01 -0.09 9.90 22.72 0.23 0.13 16 5 C -0.20 2.13 10.09 22.32 0.23 2.36 16 6 C 0.17 -1.50 11.16 84.69 0.95 -0.55 16 7 N -0.55 1.15 8.64 -307.97 -2.66 -1.51 16 8 C 0.36 0.66 7.47 85.16 0.64 1.30 16 9 O -0.32 -1.34 9.20 -87.70 -0.81 -2.15 16 10 C 0.09 -0.09 2.38 30.59 0.07 -0.02 16 11 H 0.11 -0.29 6.98 -2.39 -0.02 -0.30 16 12 C -0.13 0.02 5.54 30.59 0.17 0.18 16 13 C -0.12 0.27 5.49 30.59 0.17 0.44 16 14 C 0.14 -0.46 2.45 44.99 0.11 -0.35 16 15 H 0.07 0.16 7.57 -2.38 -0.02 0.15 16 16 N -0.70 3.13 5.03 -445.66 -2.24 0.89 16 17 C 0.58 1.43 7.73 86.71 0.67 2.10 16 18 O -0.57 -5.93 15.93 -4.00 -0.06 -5.99 16 19 C -0.17 -0.29 5.84 -20.35 -0.12 -0.41 16 20 C 0.16 0.81 9.91 83.65 0.83 1.64 16 21 N -0.36 -2.26 2.93 -337.70 -0.99 -3.25 16 22 C -0.05 -0.17 6.28 41.01 0.26 0.09 16 23 C -0.06 0.15 3.05 71.24 0.22 0.37 16 24 O -0.57 0.08 10.88 -148.98 -1.62 -1.54 16 25 Si 0.81 -3.98 31.18 68.60 2.14 -1.85 16 26 C 0.04 0.10 10.44 83.68 0.87 0.98 16 27 N -0.49 -4.21 11.30 -194.10 -2.19 -6.40 16 28 C 0.22 1.70 7.59 134.19 1.02 2.72 16 29 C -0.08 -0.28 6.24 22.42 0.14 -0.14 16 30 Br 0.01 0.02 33.72 -20.37 -0.69 -0.67 16 31 C -0.02 0.04 9.26 22.55 0.21 0.25 16 32 C -0.11 0.86 5.39 30.61 0.17 1.02 16 33 C -0.11 0.38 5.58 30.61 0.17 0.55 16 34 H 0.17 -1.90 8.06 -2.91 -0.02 -1.92 16 35 H 0.18 -3.20 8.06 -2.91 -0.02 -3.22 16 36 H 0.20 -3.11 8.06 -2.91 -0.02 -3.13 16 37 H 0.07 0.08 8.14 -2.38 -0.02 0.06 16 38 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 39 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 40 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 41 H 0.42 -4.63 6.64 -92.71 -0.62 -5.24 16 42 H 0.19 1.06 6.19 -2.91 -0.02 1.04 16 43 H 0.11 -0.80 7.96 -2.39 -0.02 -0.82 16 44 H 0.41 -3.39 8.74 -74.06 -0.65 -4.03 16 45 H -0.27 0.52 7.11 99.48 0.71 1.22 16 46 H -0.31 -1.50 7.11 99.48 0.71 -0.79 16 47 H 0.23 -1.52 6.90 -2.91 -0.02 -1.54 16 48 H 0.19 -1.89 6.44 -2.91 -0.02 -1.90 16 49 H 0.10 -1.17 8.14 -2.39 -0.02 -1.19 16 50 H 0.09 -0.81 8.14 -2.38 -0.02 -0.83 16 51 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 52 H 0.06 -0.03 8.14 -2.38 -0.02 -0.04 16 Total: 0.00 -34.87 460.78 -0.78 -35.64 By element: Atomic # 1 Polarization: -22.95 SS G_CDS: -0.19 Total: -23.14 kcal Atomic # 6 Polarization: 7.72 SS G_CDS: 8.18 Total: 15.90 kcal Atomic # 7 Polarization: -8.48 SS G_CDS: -7.73 Total: -16.21 kcal Atomic # 8 Polarization: -7.19 SS G_CDS: -2.49 Total: -9.68 kcal Atomic # 14 Polarization: -3.98 SS G_CDS: 2.14 Total: -1.85 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -34.87 -0.78 -35.64 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16903866_12335884.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.474 kcal (2) G-P(sol) polarization free energy of solvation -34.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.779 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.644 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.830 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.19 seconds