Wall clock time and date at job start Thu Mar 4 2021 17:33:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86301 * 109.00679 * 2 1 4 4 C 1.86974 * 109.02046 * 241.16910 * 2 1 3 5 5 C 1.54088 * 109.19828 * 199.18538 * 4 2 1 6 6 C 1.52939 * 108.12591 * 321.33236 * 5 4 2 7 7 N 1.45481 * 105.50414 * 102.39635 * 6 5 4 8 8 C 1.34779 * 116.96300 * 81.14343 * 7 6 5 9 9 O 1.21694 * 119.99780 * 183.75923 * 8 7 6 10 10 C 1.46678 * 120.00145 * 3.75741 * 8 7 6 11 11 C 1.37864 * 126.23575 * 166.45314 * 10 8 7 12 12 C 1.39837 * 107.08775 * 179.97438 * 11 10 8 13 13 C 1.50701 * 126.06620 * 179.73579 * 12 11 10 14 14 O 1.42899 * 109.47328 * 299.99921 * 13 12 11 15 15 Si 1.86292 * 109.47145 * 179.97438 * 13 12 11 16 16 H 1.48506 * 109.47075 * 59.99820 * 15 13 12 17 17 H 1.48500 * 109.47302 * 179.97438 * 15 13 12 18 18 H 1.48505 * 109.47455 * 300.00467 * 15 13 12 19 19 C 1.35444 * 107.86244 * 359.97438 * 12 11 10 20 20 N 1.35532 * 108.87782 * 0.02562 * 19 12 11 21 21 C 1.42424 * 126.06730 * 260.85665 * 7 6 5 22 22 C 1.55252 * 107.47626 * 64.52337 * 21 7 6 23 23 H 1.09000 * 109.46990 * 301.09306 * 1 2 3 24 24 H 1.08996 * 109.47107 * 61.09320 * 1 2 3 25 25 H 1.08997 * 109.47094 * 181.09693 * 1 2 3 26 26 H 1.09000 * 109.46895 * 159.97222 * 3 2 1 27 27 H 1.08999 * 109.47234 * 279.97067 * 3 2 1 28 28 H 1.08994 * 109.47117 * 39.97542 * 3 2 1 29 29 H 1.09005 * 109.51544 * 319.10106 * 4 2 1 30 30 H 1.09000 * 109.51417 * 79.21136 * 4 2 1 31 31 H 1.08997 * 109.73556 * 81.04969 * 5 4 2 32 32 H 1.09003 * 109.73894 * 201.70249 * 5 4 2 33 33 H 1.09003 * 110.17373 * 343.49568 * 6 5 4 34 34 H 1.08996 * 110.45232 * 221.44795 * 6 5 4 35 35 H 1.08011 * 126.45535 * 359.93828 * 11 10 8 36 36 H 1.09007 * 109.47136 * 59.99686 * 13 12 11 37 37 H 0.96703 * 113.99956 * 300.00038 * 14 13 12 38 38 H 1.07999 * 125.56117 * 180.02562 * 19 12 11 39 39 H 0.96997 * 125.68076 * 180.02562 * 20 19 12 40 40 H 1.09008 * 109.85564 * 184.01382 * 21 7 6 41 41 H 1.08998 * 109.85781 * 304.95616 * 21 7 6 42 42 H 1.08991 * 109.51557 * 57.36736 * 22 21 7 43 43 H 1.09000 * 109.51497 * 177.52673 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4698 1.7614 0.0000 4 6 2.4724 -0.8524 -1.5486 5 6 3.9369 -1.2864 -1.3452 6 6 4.6551 -0.1855 -0.5634 7 7 4.7482 -0.6763 0.8029 8 6 5.7456 -1.5410 1.0751 9 8 5.8340 -2.0390 2.1819 10 6 6.7245 -1.8817 0.0372 11 6 7.9262 -2.5289 0.2313 12 6 8.5361 -2.6474 -1.0214 13 6 9.8732 -3.2841 -1.3005 14 8 10.8913 -2.5914 -0.5756 15 14 10.2366 -3.1909 -3.1253 16 1 10.2668 -1.7688 -3.5520 17 1 11.5544 -3.8178 -3.4003 18 1 9.1784 -3.9111 -3.8783 19 6 7.7143 -2.0836 -1.9386 20 7 6.6101 -1.6144 -1.3083 21 6 3.8869 -0.3237 1.8811 22 6 2.4671 -0.8470 1.5338 23 1 -0.3633 0.5307 0.8800 24 1 -0.3633 0.4967 -0.8996 25 1 -0.3633 -1.0274 0.0197 26 1 3.5010 1.7905 0.3520 27 1 2.4199 2.1629 -1.0121 28 1 1.8436 2.3614 0.6602 29 1 1.8569 -1.7298 -1.7475 30 1 2.4092 -0.1645 -2.3917 31 1 3.9695 -2.2195 -0.7828 32 1 4.4181 -1.4232 -2.3136 33 1 4.0745 0.7366 -0.5930 34 1 5.6518 -0.0171 -0.9712 35 1 8.3222 -2.8780 1.1736 36 1 9.8509 -4.3281 -0.9877 37 1 10.9683 -1.6547 -0.8034 38 1 7.9074 -2.0186 -2.9992 39 1 5.8632 -1.1655 -1.7344 40 1 4.2378 -0.7886 2.8025 41 1 3.8650 0.7597 1.9983 42 1 2.5070 -1.9228 1.3640 43 1 1.7882 -0.6328 2.3593 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:33:39 Heat of formation + Delta-G solvation = -5.653915 kcal Electronic energy + Delta-G solvation = -23153.402302 eV Core-core repulsion = 19939.095826 eV Total energy + Delta-G solvation = -3214.306476 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 296.147 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.99631 -40.79181 -38.14673 -37.56428 -34.58730 -32.68158 -31.73061 -30.31873 -29.51332 -28.94107 -27.35506 -26.40888 -24.77565 -23.21016 -22.29704 -21.05475 -20.79372 -19.03605 -17.82885 -17.57294 -17.00755 -16.67231 -16.10943 -15.82736 -15.50507 -15.32696 -15.08874 -14.87028 -14.71540 -14.51064 -14.27494 -13.99084 -13.95580 -13.79234 -13.63992 -13.44458 -13.39156 -13.15547 -12.94340 -12.80089 -12.35937 -12.30797 -12.11816 -12.10666 -11.72811 -11.09833 -11.05167 -10.80686 -10.60745 -10.33199 -9.90217 -9.71468 -9.23643 0.46499 1.22105 1.44477 1.49714 1.54183 1.58484 1.61646 1.63084 1.88811 1.97320 2.10517 2.38175 2.40326 3.29775 3.45355 3.56350 3.64567 3.83192 3.94648 4.04949 4.11730 4.12918 4.21883 4.28707 4.42429 4.46215 4.48067 4.56284 4.59303 4.60451 4.62802 4.79167 4.87332 4.88787 4.99093 5.05547 5.13068 5.24803 5.33194 5.38050 5.55218 5.67362 5.87498 6.16046 6.29606 6.71974 7.13362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.007 2.993 3 C -0.464 4.464 4 C -0.410 4.410 5 C -0.143 4.143 6 C 0.040 3.960 7 N -0.602 5.602 8 C 0.580 3.420 9 O -0.521 6.521 10 C -0.057 4.057 11 C -0.075 4.075 12 C -0.209 4.209 13 C -0.046 4.046 14 O -0.540 6.540 15 Si 0.946 3.054 16 H -0.253 1.253 17 H -0.253 1.253 18 H -0.252 1.252 19 C 0.016 3.984 20 N -0.546 5.546 21 C 0.117 3.883 22 C -0.432 4.432 23 H 0.070 0.930 24 H 0.069 0.931 25 H 0.069 0.931 26 H 0.076 0.924 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.083 0.917 32 H 0.069 0.931 33 H 0.125 0.875 34 H 0.094 0.906 35 H 0.151 0.849 36 H 0.114 0.886 37 H 0.374 0.626 38 H 0.169 0.831 39 H 0.427 0.573 40 H 0.106 0.894 41 H 0.073 0.927 42 H 0.080 0.920 43 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.034 3.575 -5.042 6.886 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.202 2.798 3 C -0.570 4.570 4 C -0.495 4.495 5 C -0.182 4.182 6 C -0.082 4.082 7 N -0.335 5.335 8 C 0.370 3.630 9 O -0.397 6.397 10 C -0.169 4.169 11 C -0.101 4.101 12 C -0.216 4.216 13 C -0.158 4.158 14 O -0.345 6.345 15 Si 0.769 3.231 16 H -0.177 1.177 17 H -0.176 1.176 18 H -0.176 1.176 19 C -0.121 4.121 20 N -0.155 5.155 21 C -0.006 4.006 22 C -0.519 4.519 23 H 0.089 0.911 24 H 0.088 0.912 25 H 0.088 0.912 26 H 0.094 0.906 27 H 0.092 0.908 28 H 0.094 0.906 29 H 0.099 0.901 30 H 0.100 0.900 31 H 0.102 0.898 32 H 0.087 0.913 33 H 0.143 0.857 34 H 0.112 0.888 35 H 0.169 0.831 36 H 0.132 0.868 37 H 0.221 0.779 38 H 0.186 0.814 39 H 0.279 0.721 40 H 0.124 0.876 41 H 0.091 0.909 42 H 0.099 0.901 43 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.951 2.882 -5.109 6.566 hybrid contribution -0.673 0.697 -0.216 0.993 sum -3.624 3.579 -5.324 7.368 Atomic orbital electron populations 1.26125 1.20455 1.04565 1.04592 0.79261 0.67144 0.66756 0.66656 1.26665 1.05998 1.19367 1.04985 1.26521 0.98987 1.08136 1.15849 1.22293 0.96758 0.99189 0.99932 1.22900 1.03089 1.00282 0.81965 1.46751 1.30869 1.45680 1.10154 1.17366 0.80052 0.78959 0.86653 1.90851 1.73688 1.52464 1.22672 1.20373 1.00270 1.13021 0.83210 1.21196 0.92007 0.98515 0.98389 1.19896 0.99246 1.08771 0.93673 1.24291 0.84486 0.98659 1.08316 1.86513 1.54576 1.26552 1.66855 0.85803 0.81402 0.81299 0.74610 1.17695 1.17614 1.17604 1.21944 0.89168 1.02631 0.98379 1.43787 1.18830 1.45802 1.07055 1.20954 0.88524 1.00212 0.90861 1.26958 1.00896 1.08147 1.15861 0.91067 0.91178 0.91198 0.90577 0.90834 0.90566 0.90105 0.90045 0.89826 0.91256 0.85739 0.88821 0.83147 0.86791 0.77919 0.81433 0.72098 0.87609 0.90850 0.90110 0.89355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.07 8.65 101.05 0.87 1.94 16 2 Si 1.01 -3.84 10.05 -169.99 -1.71 -5.55 16 3 C -0.46 1.65 7.38 101.05 0.75 2.39 16 4 C -0.41 1.48 5.09 37.73 0.19 1.67 16 5 C -0.14 0.44 4.39 -26.19 -0.12 0.32 16 6 C 0.04 -0.11 4.96 -4.62 -0.02 -0.14 16 7 N -0.60 0.06 2.18 -177.74 -0.39 -0.32 16 8 C 0.58 1.80 6.95 -12.85 -0.09 1.72 16 9 O -0.52 -3.54 15.92 5.19 0.08 -3.45 16 10 C -0.06 -0.11 6.43 -81.98 -0.53 -0.64 16 11 C -0.07 -0.20 10.62 -39.12 -0.42 -0.62 16 12 C -0.21 -0.16 5.44 -105.02 -0.57 -0.73 16 13 C -0.05 0.00 3.02 36.01 0.11 0.11 16 14 O -0.54 -0.57 12.88 -35.23 -0.45 -1.03 16 15 Si 0.95 -1.03 25.87 -169.99 -4.40 -5.42 16 16 H -0.25 0.32 7.11 56.52 0.40 0.72 16 17 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 18 H -0.25 0.20 7.11 56.52 0.40 0.60 16 19 C 0.02 -0.01 10.45 -16.91 -0.18 -0.19 16 20 N -0.55 0.50 4.51 -9.39 -0.04 0.46 16 21 C 0.12 -0.04 5.82 -4.99 -0.03 -0.07 16 22 C -0.43 0.73 4.96 38.35 0.19 0.92 16 23 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 24 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 25 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H 0.08 -0.27 4.90 -51.93 -0.25 -0.52 16 27 H 0.07 -0.29 7.96 -51.93 -0.41 -0.70 16 28 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 29 H 0.08 -0.25 7.97 -51.93 -0.41 -0.67 16 30 H 0.08 -0.36 7.97 -51.93 -0.41 -0.78 16 31 H 0.08 -0.10 7.38 -51.93 -0.38 -0.48 16 32 H 0.07 -0.31 6.71 -51.93 -0.35 -0.66 16 33 H 0.13 -0.54 2.83 -51.93 -0.15 -0.68 16 34 H 0.09 -0.32 4.92 -51.93 -0.26 -0.58 16 35 H 0.15 0.52 8.06 -52.48 -0.42 0.10 16 36 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 37 H 0.37 -0.84 8.70 45.56 0.40 -0.44 16 38 H 0.17 -0.58 6.19 -52.49 -0.32 -0.91 16 39 H 0.43 -1.38 2.78 -40.82 -0.11 -1.49 16 40 H 0.11 0.20 6.56 -51.92 -0.34 -0.14 16 41 H 0.07 -0.15 6.56 -51.93 -0.34 -0.49 16 42 H 0.08 -0.03 7.96 -51.93 -0.41 -0.45 16 43 H 0.09 -0.19 7.96 -51.93 -0.41 -0.61 16 LS Contribution 322.13 15.07 4.85 4.85 Total: 0.00 -7.18 322.13 -7.35 -14.54 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -5.47 Total: -10.76 kcal Atomic # 6 Polarization: 6.51 SS G_CDS: 0.16 Total: 6.68 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.43 Total: 0.14 kcal Atomic # 8 Polarization: -4.11 SS G_CDS: -0.37 Total: -4.48 kcal Atomic # 14 Polarization: -4.86 SS G_CDS: -6.11 Total: -10.97 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -7.18 -7.35 -14.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.883 kcal (2) G-P(sol) polarization free energy of solvation -7.182 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.354 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.537 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds