Wall clock time and date at job start Thu Mar 4 2021 17:37:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.37647 * 125.68399 * 2 1 4 4 C 1.46680 * 126.23119 * 0.02562 * 3 2 1 5 5 O 1.21701 * 119.99818 * 352.06003 * 4 3 2 6 6 N 1.34780 * 120.00335 * 172.06405 * 4 3 2 7 7 C 1.46268 * 122.81689 * 2.53771 * 6 4 3 8 8 C 1.45978 * 114.58135 * 79.19497 * 7 6 4 9 9 C 1.55337 * 108.92109 * 60.35170 * 8 7 6 10 10 Si 1.84147 * 109.13021 * 290.55375 * 9 8 7 11 11 C 1.86296 * 108.84693 * 207.39381 * 10 9 8 12 12 C 1.86301 * 108.84335 * 325.85954 * 10 9 8 13 13 C 1.88549 * 112.66071 * 86.57374 * 10 9 8 14 14 C 1.44480 * 122.81913 * 182.24205 * 6 4 3 15 15 C 1.37867 * 107.53801 * 179.97438 * 3 2 1 16 16 C 1.39840 * 107.08656 * 359.97438 * 15 3 2 17 17 C 1.35458 * 107.85801 * 359.73899 * 16 15 3 18 18 C 1.50701 * 125.55742 * 180.29834 * 17 16 15 19 19 O 1.42903 * 109.46637 * 210.15302 * 18 17 16 20 20 Si 1.86300 * 109.47205 * 330.15047 * 18 17 16 21 21 H 1.48496 * 109.46753 * 60.00831 * 20 18 17 22 22 H 1.48506 * 109.46946 * 180.02562 * 20 18 17 23 23 H 1.48496 * 109.47497 * 300.00508 * 20 18 17 24 24 H 1.08996 * 109.46944 * 95.12723 * 1 2 3 25 25 H 1.09003 * 109.47262 * 335.12763 * 1 2 3 26 26 H 1.08996 * 109.47709 * 215.12832 * 1 2 3 27 27 H 1.08998 * 108.45903 * 200.51619 * 7 6 4 28 28 H 1.09004 * 108.46264 * 318.03596 * 7 6 4 29 29 H 1.08993 * 109.56302 * 180.18750 * 8 7 6 30 30 H 1.08999 * 109.56087 * 300.41285 * 8 7 6 31 31 H 1.08999 * 109.53015 * 50.45419 * 9 8 7 32 32 H 1.09007 * 109.52783 * 170.59050 * 9 8 7 33 33 H 1.09007 * 109.47249 * 60.00357 * 11 10 9 34 34 H 1.09003 * 109.47166 * 179.97438 * 11 10 9 35 35 H 1.09000 * 109.47633 * 299.99928 * 11 10 9 36 36 H 1.09002 * 109.47192 * 39.05731 * 12 10 9 37 37 H 1.09005 * 109.47086 * 159.05242 * 12 10 9 38 38 H 1.08996 * 109.47397 * 279.05260 * 12 10 9 39 39 H 1.09001 * 110.07926 * 80.92679 * 13 10 9 40 40 H 1.08997 * 110.08081 * 202.42249 * 13 10 9 41 41 H 1.09003 * 109.89408 * 50.60023 * 14 6 4 42 42 H 1.09004 * 109.88976 * 171.70687 * 14 6 4 43 43 H 1.08007 * 126.45974 * 179.97438 * 15 3 2 44 44 H 1.08001 * 126.06841 * 180.02562 * 16 15 3 45 45 H 1.08993 * 109.47348 * 90.15884 * 18 17 16 46 46 H 0.96703 * 114.00243 * 60.00392 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1180 0.0000 4 6 1.8125 2.5124 0.0005 5 8 0.6313 2.7668 -0.1446 6 7 2.7023 3.5119 0.1616 7 6 4.1410 3.2799 0.2867 8 6 4.8285 3.0334 -0.9772 9 6 4.6492 4.2715 -1.8980 10 14 2.8904 4.3756 -2.4336 11 6 2.8132 5.2423 -4.0809 12 6 2.2183 2.6492 -2.6308 13 6 1.8102 5.3100 -1.2027 14 6 2.3156 4.9028 0.2190 15 6 3.5780 0.6887 0.0006 16 6 3.5521 -0.7095 0.0015 17 6 2.2554 -1.1010 0.0074 18 6 1.7707 -2.5279 0.0167 19 8 0.5126 -2.6080 -0.6561 20 14 3.0111 -3.6107 -0.8550 21 1 4.3185 -3.5275 -0.1557 22 1 2.5332 -5.0168 -0.8463 23 1 3.1699 -3.1510 -2.2580 24 1 -0.3633 -0.0918 -1.0235 25 1 -0.3634 0.9324 0.4322 26 1 -0.3634 -0.8404 0.5913 27 1 4.5914 4.1523 0.7602 28 1 4.2966 2.4179 0.9355 29 1 5.8894 2.8687 -0.7896 30 1 4.4022 2.1535 -1.4590 31 1 4.9174 5.1749 -1.3502 32 1 5.2921 4.1714 -2.7726 33 1 3.3897 4.6793 -4.8151 34 1 1.7756 5.3091 -4.4081 35 1 3.2292 6.2451 -3.9838 36 1 2.6058 2.0152 -1.8333 37 1 1.1298 2.6749 -2.5780 38 1 2.5259 2.2476 -3.5962 39 1 1.9227 6.3846 -1.3466 40 1 0.7662 5.0233 -1.3280 41 1 1.5123 5.0348 0.9439 42 1 3.1731 5.5148 0.4987 43 1 4.4584 1.3142 0.0004 44 1 4.4132 -1.3614 0.0026 45 1 1.6541 -2.8653 1.0465 46 1 0.5414 -2.3225 -1.5795 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:37:14 Heat of formation + Delta-G solvation = -8.928404 kcal Electronic energy + Delta-G solvation = -26238.332983 eV Core-core repulsion = 22868.346895 eV Total energy + Delta-G solvation = -3369.986088 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.163 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.94085 -40.89538 -38.11895 -37.75207 -34.37614 -33.75456 -32.10366 -30.50780 -29.32370 -28.43518 -27.72897 -26.93031 -26.73485 -24.23233 -22.73371 -22.37379 -20.95496 -19.79316 -18.65589 -18.01976 -17.53518 -16.93348 -16.41261 -16.27917 -15.94780 -15.54659 -15.47024 -14.89481 -14.81722 -14.74658 -14.60202 -14.25666 -13.94652 -13.90489 -13.73288 -13.54375 -13.36541 -13.29593 -13.13201 -13.01972 -12.78788 -12.62021 -12.34037 -12.25636 -12.03531 -11.97619 -11.77864 -11.61586 -11.01689 -10.74181 -10.68235 -10.42938 -10.41851 -9.80892 -9.65689 -9.02708 0.38379 1.07422 1.45821 1.55004 1.64453 1.69826 1.81971 1.94310 1.98993 2.05356 2.28064 2.32154 2.75811 3.31270 3.48701 3.61421 3.92153 3.95615 4.18926 4.25139 4.30182 4.35238 4.42574 4.47670 4.53380 4.62876 4.66252 4.70534 4.71416 4.73080 4.75509 4.78422 4.86310 4.86730 4.99586 5.07755 5.10422 5.19136 5.32396 5.35894 5.46739 5.49606 5.56256 5.67010 5.78710 5.98111 6.13778 6.38139 6.49891 7.09566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.073 3.927 2 N -0.403 5.403 3 C -0.071 4.071 4 C 0.600 3.400 5 O -0.576 6.576 6 N -0.599 5.599 7 C 0.070 3.930 8 C -0.151 4.151 9 C -0.399 4.399 10 Si 1.043 2.957 11 C -0.464 4.464 12 C -0.484 4.484 13 C -0.435 4.435 14 C 0.120 3.880 15 C -0.158 4.158 16 C -0.219 4.219 17 C 0.007 3.993 18 C -0.065 4.065 19 O -0.553 6.553 20 Si 1.016 2.984 21 H -0.240 1.240 22 H -0.270 1.270 23 H -0.265 1.265 24 H 0.078 0.922 25 H 0.079 0.921 26 H 0.099 0.901 27 H 0.115 0.885 28 H 0.095 0.905 29 H 0.114 0.886 30 H 0.073 0.927 31 H 0.098 0.902 32 H 0.087 0.913 33 H 0.067 0.933 34 H 0.053 0.947 35 H 0.076 0.924 36 H 0.086 0.914 37 H 0.038 0.962 38 H 0.057 0.943 39 H 0.092 0.908 40 H 0.053 0.947 41 H 0.053 0.947 42 H 0.127 0.873 43 H 0.197 0.803 44 H 0.167 0.833 45 H 0.132 0.868 46 H 0.386 0.614 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.019 0.177 0.929 7.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.076 5.076 3 C -0.184 4.184 4 C 0.392 3.608 5 O -0.458 6.458 6 N -0.331 5.331 7 C -0.051 4.051 8 C -0.189 4.189 9 C -0.488 4.488 10 Si 1.234 2.766 11 C -0.570 4.570 12 C -0.588 4.588 13 C -0.520 4.520 14 C -0.003 4.003 15 C -0.183 4.183 16 C -0.242 4.242 17 C -0.111 4.111 18 C -0.174 4.174 19 O -0.359 6.359 20 Si 0.837 3.163 21 H -0.163 1.163 22 H -0.195 1.195 23 H -0.189 1.189 24 H 0.096 0.904 25 H 0.098 0.902 26 H 0.118 0.882 27 H 0.134 0.866 28 H 0.113 0.887 29 H 0.132 0.868 30 H 0.091 0.909 31 H 0.116 0.884 32 H 0.106 0.894 33 H 0.086 0.914 34 H 0.072 0.928 35 H 0.095 0.905 36 H 0.104 0.896 37 H 0.057 0.943 38 H 0.077 0.923 39 H 0.111 0.889 40 H 0.072 0.928 41 H 0.072 0.928 42 H 0.145 0.855 43 H 0.214 0.786 44 H 0.184 0.816 45 H 0.150 0.850 46 H 0.235 0.765 Dipole moment (debyes) X Y Z Total from point charges 6.334 -0.407 1.055 6.434 hybrid contribution -1.138 0.477 -0.564 1.357 sum 5.195 0.070 0.490 5.219 Atomic orbital electron populations 1.22237 0.75794 1.04621 1.04128 1.43866 1.07077 1.04458 1.52214 1.20136 0.91397 0.87352 1.19529 1.16809 0.84786 0.84012 0.75175 1.90779 1.17948 1.84967 1.52091 1.47245 1.07988 1.06332 1.71512 1.21049 0.78470 1.06118 0.99457 1.21155 1.03022 0.98829 0.95861 1.26144 1.16750 1.01211 1.04673 0.78676 0.67956 0.64589 0.65342 1.26353 1.03566 1.08644 1.18429 1.27262 1.05141 1.21668 1.04679 1.27587 1.08647 1.08700 1.07042 1.21661 1.01836 0.80059 0.96713 1.22766 0.95692 0.95825 1.04059 1.21064 0.95455 0.96032 1.11693 1.21517 0.91288 0.89662 1.08593 1.25085 0.94327 0.93566 1.04462 1.86476 1.30405 1.89284 1.29760 0.84759 0.76479 0.76349 0.78703 1.16322 1.19479 1.18893 0.90394 0.90213 0.88236 0.86647 0.88733 0.86760 0.90871 0.88376 0.89411 0.91370 0.92765 0.90515 0.89565 0.94260 0.92329 0.88933 0.92839 0.92810 0.85464 0.78635 0.81607 0.85048 0.76481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.37 9.26 127.77 1.18 1.56 16 2 N -0.40 -2.32 3.16 -519.73 -1.64 -3.96 16 3 C -0.07 -0.41 5.15 40.35 0.21 -0.20 16 4 C 0.60 4.53 4.15 86.45 0.36 4.89 16 5 O -0.58 -8.33 13.23 -4.35 -0.06 -8.39 16 6 N -0.60 -0.32 1.62 -838.05 -1.36 -1.68 16 7 C 0.07 -0.46 4.42 84.27 0.37 -0.09 16 8 C -0.15 1.13 4.23 29.24 0.12 1.26 16 9 C -0.40 2.68 4.72 72.79 0.34 3.03 16 10 Si 1.04 -1.25 9.98 68.60 0.68 -0.56 16 11 C -0.46 -0.40 8.65 113.37 0.98 0.58 16 12 C -0.48 -2.74 6.85 113.37 0.78 -1.96 16 13 C -0.43 -0.65 5.03 73.12 0.37 -0.29 16 14 C 0.12 -0.08 5.72 87.90 0.50 0.43 16 15 C -0.16 -0.13 7.23 22.57 0.16 0.04 16 16 C -0.22 -0.11 9.37 22.01 0.21 0.10 16 17 C 0.01 0.02 6.15 41.34 0.25 0.27 16 18 C -0.07 0.10 2.90 71.24 0.21 0.31 16 19 O -0.55 0.18 10.50 -148.98 -1.56 -1.38 16 20 Si 1.02 -2.97 26.54 68.60 1.82 -1.15 16 21 H -0.24 0.95 6.79 99.48 0.68 1.63 16 22 H -0.27 -0.01 7.11 99.48 0.71 0.70 16 23 H -0.26 0.17 7.11 99.48 0.71 0.88 16 24 H 0.08 0.30 8.14 -2.39 -0.02 0.28 16 25 H 0.08 0.72 6.22 -2.39 -0.01 0.71 16 26 H 0.10 0.29 7.11 -2.39 -0.02 0.27 16 27 H 0.12 -1.37 7.17 -2.39 -0.02 -1.39 16 28 H 0.09 -0.68 5.24 -2.38 -0.01 -0.69 16 29 H 0.11 -1.37 8.14 -2.39 -0.02 -1.39 16 30 H 0.07 -0.32 3.99 -2.39 -0.01 -0.33 16 31 H 0.10 -0.98 7.90 -2.39 -0.02 -0.99 16 32 H 0.09 -0.63 7.95 -2.38 -0.02 -0.65 16 33 H 0.07 0.04 7.96 -2.38 -0.02 0.02 16 34 H 0.05 0.18 7.96 -2.39 -0.02 0.16 16 35 H 0.08 -0.08 7.96 -2.39 -0.02 -0.10 16 36 H 0.09 0.44 1.86 -2.39 0.00 0.44 16 37 H 0.04 0.44 7.27 -2.38 -0.02 0.43 16 38 H 0.06 0.30 7.96 -2.39 -0.02 0.29 16 39 H 0.09 -0.16 8.00 -2.39 -0.02 -0.18 16 40 H 0.05 0.44 7.50 -2.39 -0.02 0.42 16 41 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 42 H 0.13 -1.06 7.17 -2.39 -0.02 -1.07 16 43 H 0.20 -1.02 3.17 -2.91 -0.01 -1.03 16 44 H 0.17 -0.67 6.64 -2.91 -0.02 -0.69 16 45 H 0.13 -0.47 7.96 -2.39 -0.02 -0.49 16 46 H 0.39 -1.85 8.70 -74.06 -0.64 -2.49 16 Total: 0.00 -17.35 330.01 5.01 -12.34 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: 1.08 Total: -5.12 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: 6.05 Total: 9.91 kcal Atomic # 7 Polarization: -2.64 SS G_CDS: -3.00 Total: -5.64 kcal Atomic # 8 Polarization: -8.15 SS G_CDS: -1.62 Total: -9.77 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.51 Total: -1.71 kcal Total: -17.35 5.01 -12.34 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.412 kcal (2) G-P(sol) polarization free energy of solvation -17.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds