Wall clock time and date at job start Thu Mar 4 2021 17:37:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86304 * 109.00389 * 2 1 4 4 C 1.86972 * 109.01896 * 241.16984 * 2 1 3 5 5 C 1.54096 * 109.19427 * 199.18375 * 4 2 1 6 6 C 1.52933 * 108.12562 * 321.33096 * 5 4 2 7 7 N 1.45487 * 105.50473 * 102.40041 * 6 5 4 8 8 C 1.34777 * 116.96548 * 81.13856 * 7 6 5 9 9 O 1.21714 * 119.99804 * 185.19030 * 8 7 6 10 10 C 1.46566 * 119.99986 * 5.19243 * 8 7 6 11 11 C 1.40848 * 126.57989 * 232.94888 * 10 8 7 12 12 C 1.40095 * 132.86558 * 0.02562 * 11 10 8 13 13 C 1.36452 * 119.25348 * 179.97438 * 12 11 10 14 14 C 1.50701 * 120.29508 * 179.97438 * 13 12 11 15 15 O 1.42890 * 109.47358 * 239.99609 * 14 13 12 16 16 Si 1.86305 * 109.47211 * 119.99437 * 14 13 12 17 17 H 1.48498 * 109.47095 * 180.02562 * 16 14 13 18 18 H 1.48503 * 109.47118 * 300.00439 * 16 14 13 19 19 H 1.48500 * 109.46655 * 60.00062 * 16 14 13 20 20 C 1.40152 * 119.40811 * 0.24702 * 13 12 11 21 21 C 1.35189 * 120.32189 * 359.49908 * 20 13 12 22 22 N 1.36239 * 120.70195 * 0.49404 * 21 20 13 23 23 N 1.40017 * 132.00833 * 179.78792 * 22 21 20 24 24 C 1.30739 * 109.60372 * 179.97438 * 23 22 21 25 25 C 1.42426 * 126.06414 * 260.85757 * 7 6 5 26 26 C 1.55254 * 107.47691 * 64.51537 * 25 7 6 27 27 H 1.09002 * 109.47341 * 301.08995 * 1 2 3 28 28 H 1.09000 * 109.47514 * 61.09672 * 1 2 3 29 29 H 1.08999 * 109.46672 * 181.09420 * 1 2 3 30 30 H 1.08999 * 109.46852 * 159.53852 * 3 2 1 31 31 H 1.09000 * 109.46922 * 279.53974 * 3 2 1 32 32 H 1.08996 * 109.47123 * 39.54359 * 3 2 1 33 33 H 1.08998 * 109.52070 * 319.09866 * 4 2 1 34 34 H 1.09003 * 109.51934 * 79.21384 * 4 2 1 35 35 H 1.09000 * 109.73987 * 81.05047 * 5 4 2 36 36 H 1.09003 * 109.73795 * 201.70464 * 5 4 2 37 37 H 1.08997 * 110.18358 * 343.49769 * 6 5 4 38 38 H 1.09000 * 110.45463 * 221.44968 * 6 5 4 39 39 H 1.07997 * 120.37174 * 359.93239 * 12 11 10 40 40 H 1.09007 * 109.46960 * 359.97438 * 14 13 12 41 41 H 0.96701 * 114.00144 * 300.00516 * 15 14 13 42 42 H 1.08002 * 119.83725 * 179.75349 * 20 13 12 43 43 H 1.08000 * 119.64661 * 180.28167 * 21 20 13 44 44 H 1.07999 * 125.63276 * 179.97438 * 24 23 22 45 45 H 1.09006 * 109.85494 * 184.00752 * 25 7 6 46 46 H 1.08995 * 109.85878 * 304.95346 * 25 7 6 47 47 H 1.09003 * 109.50864 * 57.36744 * 26 25 7 48 48 H 1.09005 * 109.51378 * 177.51847 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4697 1.7615 0.0000 4 6 2.4723 -0.8524 -1.5486 5 6 3.9369 -1.2863 -1.3452 6 6 4.6551 -0.1854 -0.5634 7 7 4.7482 -0.6762 0.8030 8 6 5.7456 -1.5409 1.0751 9 8 5.8190 -2.0590 2.1740 10 6 6.7419 -1.8573 0.0478 11 6 7.1132 -3.1421 -0.3940 12 6 6.6958 -4.4306 -0.0359 13 6 7.2541 -5.5093 -0.6577 14 6 6.8230 -6.9058 -0.2903 15 8 7.9494 -7.6407 0.1922 16 14 6.1248 -7.7559 -1.7939 17 1 5.6994 -9.1318 -1.4318 18 1 4.9541 -6.9922 -2.2955 19 1 7.1639 -7.8210 -2.8528 20 6 8.2362 -5.3071 -1.6368 21 6 8.6201 -4.0544 -1.9700 22 7 8.0683 -2.9711 -1.3551 23 7 8.2853 -1.5961 -1.5065 24 6 7.5097 -0.9367 -0.6862 25 6 3.8869 -0.3236 1.8811 26 6 2.4670 -0.8469 1.5338 27 1 -0.3634 0.5307 0.8800 28 1 -0.3634 0.4967 -0.8996 29 1 -0.3632 -1.0275 0.0196 30 1 3.4983 1.7915 0.3593 31 1 2.4270 2.1605 -1.0135 32 1 1.8388 2.3631 0.6543 33 1 1.8569 -1.7297 -1.7475 34 1 2.4092 -0.1645 -2.3918 35 1 3.9697 -2.2194 -0.7828 36 1 4.4182 -1.4231 -2.3136 37 1 4.0746 0.7367 -0.5929 38 1 5.6518 -0.0169 -0.9712 39 1 5.9411 -4.5686 0.7242 40 1 6.0606 -6.8580 0.4873 41 1 8.6689 -7.7234 -0.4486 42 1 8.6856 -6.1560 -2.1305 43 1 9.3746 -3.9110 -2.7293 44 1 7.4666 0.1380 -0.5881 45 1 4.2377 -0.7885 2.8025 46 1 3.8649 0.7598 1.9983 47 1 2.5071 -1.9228 1.3639 48 1 1.7881 -0.6328 2.3593 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:37:26 Heat of formation + Delta-G solvation = 26.986049 kcal Electronic energy + Delta-G solvation = -29673.531396 eV Core-core repulsion = 25854.998343 eV Total energy + Delta-G solvation = -3818.533053 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 347.158 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.33665 -41.16338 -39.37336 -37.59259 -37.27305 -34.44588 -33.86530 -32.13184 -31.78598 -29.95963 -29.33817 -28.81477 -27.27309 -26.79371 -25.20099 -24.35139 -23.19471 -22.73248 -22.31020 -20.17077 -18.96240 -18.61758 -18.08154 -17.54654 -17.39291 -16.80958 -16.59639 -16.21958 -15.85630 -15.61534 -15.32128 -15.21309 -15.07129 -14.86728 -14.70083 -14.43245 -14.23930 -14.07050 -13.85973 -13.64555 -13.58535 -13.40988 -13.25360 -13.23949 -12.96483 -12.72975 -12.60529 -12.43676 -12.28611 -12.11675 -11.94699 -11.94282 -11.79648 -11.51921 -10.90849 -10.81022 -10.79148 -10.56260 -10.42837 -10.31550 -9.49704 -8.69105 -0.52532 -0.13510 0.95788 1.03887 1.20491 1.27800 1.41183 1.73196 1.74712 1.77868 1.78448 1.91184 2.14495 2.39277 2.56305 3.05312 3.16163 3.32733 3.45081 3.66631 3.74822 3.84141 3.92744 4.04466 4.08665 4.20351 4.30307 4.32514 4.34536 4.41529 4.46983 4.49258 4.60439 4.66855 4.68802 4.69906 4.70351 4.72976 4.78845 5.01140 5.04217 5.05778 5.13240 5.21314 5.26554 5.29007 5.39935 5.46312 5.48262 5.66609 5.85460 6.33858 6.35427 6.40058 7.35865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.003 2.997 3 C -0.461 4.461 4 C -0.411 4.411 5 C -0.120 4.120 6 C 0.066 3.934 7 N -0.599 5.599 8 C 0.592 3.408 9 O -0.535 6.535 10 C -0.302 4.302 11 C 0.157 3.843 12 C -0.096 4.096 13 C -0.070 4.070 14 C -0.081 4.081 15 O -0.530 6.530 16 Si 0.950 3.050 17 H -0.243 1.243 18 H -0.248 1.248 19 H -0.246 1.246 20 C -0.166 4.166 21 C 0.125 3.875 22 N -0.268 5.268 23 N -0.310 5.310 24 C 0.116 3.884 25 C 0.118 3.882 26 C -0.429 4.429 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.077 0.923 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.076 0.924 35 H 0.070 0.930 36 H 0.064 0.936 37 H 0.112 0.888 38 H 0.089 0.911 39 H 0.154 0.846 40 H 0.124 0.876 41 H 0.376 0.624 42 H 0.160 0.840 43 H 0.177 0.823 44 H 0.200 0.800 45 H 0.102 0.898 46 H 0.071 0.929 47 H 0.079 0.921 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.342 -0.148 -4.633 4.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.198 2.802 3 C -0.567 4.567 4 C -0.497 4.497 5 C -0.159 4.159 6 C -0.055 4.055 7 N -0.331 5.331 8 C 0.380 3.620 9 O -0.412 6.412 10 C -0.317 4.317 11 C 0.037 3.963 12 C -0.115 4.115 13 C -0.076 4.076 14 C -0.191 4.191 15 O -0.335 6.335 16 Si 0.769 3.231 17 H -0.166 1.166 18 H -0.171 1.171 19 H -0.169 1.169 20 C -0.188 4.188 21 C 0.000 4.000 22 N -0.033 5.033 23 N -0.131 5.131 24 C -0.064 4.064 25 C -0.005 4.005 26 C -0.516 4.516 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.095 0.905 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.095 0.905 35 H 0.089 0.911 36 H 0.083 0.917 37 H 0.130 0.870 38 H 0.107 0.893 39 H 0.171 0.829 40 H 0.142 0.858 41 H 0.223 0.777 42 H 0.177 0.823 43 H 0.194 0.806 44 H 0.217 0.783 45 H 0.120 0.880 46 H 0.089 0.911 47 H 0.098 0.902 48 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -1.112 -0.610 -5.163 5.316 hybrid contribution -0.096 0.383 0.370 0.541 sum -1.208 -0.226 -4.793 4.948 Atomic orbital electron populations 1.26139 1.20750 1.04397 1.04430 0.79322 0.66806 0.67012 0.67061 1.26643 1.06025 1.19232 1.04817 1.26550 1.00197 1.07656 1.15258 1.21912 0.95044 0.98481 1.00421 1.22471 1.03229 0.99124 0.80724 1.46796 1.30069 1.45842 1.10413 1.17230 0.80143 0.78607 0.86014 1.90808 1.75098 1.51528 1.23734 1.19577 1.10892 0.90723 1.10497 1.19172 0.91073 0.94702 0.91343 1.20478 1.02157 0.88041 1.00872 1.20410 0.95459 0.96867 0.94846 1.25081 0.93762 0.89618 1.10595 1.86619 1.28362 1.74466 1.44016 0.85708 0.81198 0.80870 0.75304 1.16557 1.17117 1.16920 1.20707 1.00873 0.96329 1.00877 1.21522 0.97960 0.83203 0.97360 1.46002 1.25760 1.06341 1.25149 1.77630 1.26389 0.82519 1.26521 1.23978 0.91480 1.00243 0.90721 1.20906 0.88624 0.99976 0.91022 1.26923 1.00963 1.08031 1.15642 0.91214 0.91280 0.91327 0.90467 0.90936 0.90878 0.90780 0.90513 0.91134 0.91697 0.87013 0.89326 0.82864 0.85805 0.77685 0.82264 0.80588 0.78347 0.87959 0.91080 0.90242 0.89663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.65 8.65 101.05 0.87 1.52 16 2 Si 1.00 -2.63 10.05 -169.99 -1.71 -4.33 16 3 C -0.46 1.16 7.38 101.05 0.75 1.90 16 4 C -0.41 0.71 5.09 37.73 0.19 0.90 16 5 C -0.12 0.09 5.49 -26.19 -0.14 -0.05 16 6 C 0.07 -0.09 5.21 -4.62 -0.02 -0.11 16 7 N -0.60 -0.35 2.18 -177.78 -0.39 -0.73 16 8 C 0.59 2.03 6.81 -12.90 -0.09 1.94 16 9 O -0.54 -3.75 16.12 5.18 0.08 -3.67 16 10 C -0.30 -0.80 4.73 -104.68 -0.50 -1.30 16 11 C 0.16 0.41 6.79 -84.07 -0.57 -0.16 16 12 C -0.10 -0.12 9.70 -39.53 -0.38 -0.51 16 13 C -0.07 0.05 4.53 -104.55 -0.47 -0.42 16 14 C -0.08 0.15 2.84 36.01 0.10 0.25 16 15 O -0.53 0.53 12.87 -35.23 -0.45 0.08 16 16 Si 0.95 -2.10 27.27 -169.99 -4.64 -6.74 16 17 H -0.24 0.17 7.11 56.52 0.40 0.58 16 18 H -0.25 0.23 7.11 56.52 0.40 0.63 16 19 H -0.25 0.70 7.05 56.52 0.40 1.10 16 20 C -0.17 0.39 8.38 -39.95 -0.33 0.06 16 21 C 0.13 -0.14 11.17 -16.68 -0.19 -0.32 16 22 N -0.27 -0.52 3.86 -10.55 -0.04 -0.56 16 23 N -0.31 -0.82 12.57 30.75 0.39 -0.43 16 24 C 0.12 0.15 9.80 -17.14 -0.17 -0.02 16 25 C 0.12 0.03 5.82 -4.99 -0.03 0.00 16 26 C -0.43 0.41 4.96 38.35 0.19 0.60 16 27 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 28 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 29 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H 0.08 -0.20 4.91 -51.93 -0.25 -0.46 16 31 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 32 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.07 -0.10 7.97 -51.93 -0.41 -0.52 16 34 H 0.08 -0.17 7.97 -51.93 -0.41 -0.58 16 35 H 0.07 0.04 7.39 -51.93 -0.38 -0.34 16 36 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.11 -0.32 2.84 -51.93 -0.15 -0.46 16 38 H 0.09 -0.17 4.40 -51.93 -0.23 -0.40 16 39 H 0.15 0.15 7.95 -52.49 -0.42 -0.27 16 40 H 0.12 -0.28 7.71 -51.93 -0.40 -0.68 16 41 H 0.38 -1.86 8.07 45.56 0.37 -1.49 16 42 H 0.16 -0.92 7.26 -52.49 -0.38 -1.30 16 43 H 0.18 -0.68 8.06 -52.49 -0.42 -1.10 16 44 H 0.20 -0.41 7.37 -52.49 -0.39 -0.79 16 45 H 0.10 0.24 6.57 -51.93 -0.34 -0.10 16 46 H 0.07 -0.10 6.55 -51.93 -0.34 -0.44 16 47 H 0.08 0.01 7.96 -51.93 -0.41 -0.40 16 48 H 0.08 -0.13 7.96 -51.93 -0.41 -0.55 16 LS Contribution 372.45 15.07 5.61 5.61 Total: 0.00 -9.01 372.45 -8.22 -17.23 By element: Atomic # 1 Polarization: -4.47 SS G_CDS: -6.28 Total: -10.75 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: -0.79 Total: 4.29 kcal Atomic # 7 Polarization: -1.68 SS G_CDS: -0.04 Total: -1.72 kcal Atomic # 8 Polarization: -3.22 SS G_CDS: -0.37 Total: -3.59 kcal Atomic # 14 Polarization: -4.73 SS G_CDS: -6.34 Total: -11.07 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -9.01 -8.22 -17.23 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.216 kcal (2) G-P(sol) polarization free energy of solvation -9.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.230 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds