Wall clock time and date at job start Thu Mar 4 2021 17:37:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86304 * 109.00389 * 2 1 4 4 C 1.86972 * 109.01896 * 241.16984 * 2 1 3 5 5 C 1.54096 * 109.19427 * 199.18375 * 4 2 1 6 6 C 1.52933 * 108.12562 * 321.33096 * 5 4 2 7 7 N 1.45487 * 105.50473 * 102.40041 * 6 5 4 8 8 C 1.34777 * 116.96548 * 81.13856 * 7 6 5 9 9 O 1.21714 * 119.99804 * 185.19030 * 8 7 6 10 10 C 1.46566 * 119.99986 * 5.19243 * 8 7 6 11 11 C 1.40848 * 126.57989 * 232.94888 * 10 8 7 12 12 C 1.40095 * 132.86558 * 0.02562 * 11 10 8 13 13 C 1.36452 * 119.25348 * 179.97438 * 12 11 10 14 14 C 1.50701 * 120.29508 * 179.97438 * 13 12 11 15 15 O 1.42890 * 109.47358 * 239.99609 * 14 13 12 16 16 Si 1.86305 * 109.47211 * 119.99437 * 14 13 12 17 17 H 1.48498 * 109.47095 * 180.02562 * 16 14 13 18 18 H 1.48503 * 109.47118 * 300.00439 * 16 14 13 19 19 H 1.48500 * 109.46655 * 60.00062 * 16 14 13 20 20 C 1.40152 * 119.40811 * 0.24702 * 13 12 11 21 21 C 1.35189 * 120.32189 * 359.49908 * 20 13 12 22 22 N 1.36239 * 120.70195 * 0.49404 * 21 20 13 23 23 N 1.40017 * 132.00833 * 179.78792 * 22 21 20 24 24 C 1.30739 * 109.60372 * 179.97438 * 23 22 21 25 25 C 1.42426 * 126.06414 * 260.85757 * 7 6 5 26 26 C 1.55254 * 107.47691 * 64.51537 * 25 7 6 27 27 H 1.09002 * 109.47341 * 301.08995 * 1 2 3 28 28 H 1.09000 * 109.47514 * 61.09672 * 1 2 3 29 29 H 1.08999 * 109.46672 * 181.09420 * 1 2 3 30 30 H 1.08999 * 109.46852 * 159.53852 * 3 2 1 31 31 H 1.09000 * 109.46922 * 279.53974 * 3 2 1 32 32 H 1.08996 * 109.47123 * 39.54359 * 3 2 1 33 33 H 1.08998 * 109.52070 * 319.09866 * 4 2 1 34 34 H 1.09003 * 109.51934 * 79.21384 * 4 2 1 35 35 H 1.09000 * 109.73987 * 81.05047 * 5 4 2 36 36 H 1.09003 * 109.73795 * 201.70464 * 5 4 2 37 37 H 1.08997 * 110.18358 * 343.49769 * 6 5 4 38 38 H 1.09000 * 110.45463 * 221.44968 * 6 5 4 39 39 H 1.07997 * 120.37174 * 359.93239 * 12 11 10 40 40 H 1.09007 * 109.46960 * 359.97438 * 14 13 12 41 41 H 0.96701 * 114.00144 * 300.00516 * 15 14 13 42 42 H 1.08002 * 119.83725 * 179.75349 * 20 13 12 43 43 H 1.08000 * 119.64661 * 180.28167 * 21 20 13 44 44 H 1.07999 * 125.63276 * 179.97438 * 24 23 22 45 45 H 1.09006 * 109.85494 * 184.00752 * 25 7 6 46 46 H 1.08995 * 109.85878 * 304.95346 * 25 7 6 47 47 H 1.09003 * 109.50864 * 57.36744 * 26 25 7 48 48 H 1.09005 * 109.51378 * 177.51847 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4697 1.7615 0.0000 4 6 2.4723 -0.8524 -1.5486 5 6 3.9369 -1.2863 -1.3452 6 6 4.6551 -0.1854 -0.5634 7 7 4.7482 -0.6762 0.8030 8 6 5.7456 -1.5409 1.0751 9 8 5.8190 -2.0590 2.1740 10 6 6.7419 -1.8573 0.0478 11 6 7.1132 -3.1421 -0.3940 12 6 6.6958 -4.4306 -0.0359 13 6 7.2541 -5.5093 -0.6577 14 6 6.8230 -6.9058 -0.2903 15 8 7.9494 -7.6407 0.1922 16 14 6.1248 -7.7559 -1.7939 17 1 5.6994 -9.1318 -1.4318 18 1 4.9541 -6.9922 -2.2955 19 1 7.1639 -7.8210 -2.8528 20 6 8.2362 -5.3071 -1.6368 21 6 8.6201 -4.0544 -1.9700 22 7 8.0683 -2.9711 -1.3551 23 7 8.2853 -1.5961 -1.5065 24 6 7.5097 -0.9367 -0.6862 25 6 3.8869 -0.3236 1.8811 26 6 2.4670 -0.8469 1.5338 27 1 -0.3634 0.5307 0.8800 28 1 -0.3634 0.4967 -0.8996 29 1 -0.3632 -1.0275 0.0196 30 1 3.4983 1.7915 0.3593 31 1 2.4270 2.1605 -1.0135 32 1 1.8388 2.3631 0.6543 33 1 1.8569 -1.7297 -1.7475 34 1 2.4092 -0.1645 -2.3918 35 1 3.9697 -2.2194 -0.7828 36 1 4.4182 -1.4231 -2.3136 37 1 4.0746 0.7367 -0.5929 38 1 5.6518 -0.0169 -0.9712 39 1 5.9411 -4.5686 0.7242 40 1 6.0606 -6.8580 0.4873 41 1 8.6689 -7.7234 -0.4486 42 1 8.6856 -6.1560 -2.1305 43 1 9.3746 -3.9110 -2.7293 44 1 7.4666 0.1380 -0.5881 45 1 4.2377 -0.7885 2.8025 46 1 3.8649 0.7598 1.9983 47 1 2.5071 -1.9228 1.3639 48 1 1.7881 -0.6328 2.3593 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:37:25 Heat of formation + Delta-G solvation = 30.702709 kcal Electronic energy + Delta-G solvation = -29673.370229 eV Core-core repulsion = 25854.998343 eV Total energy + Delta-G solvation = -3818.371886 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 347.158 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.37450 -41.28726 -39.33374 -37.77491 -37.21073 -34.44947 -33.86832 -32.13786 -31.81545 -29.93859 -29.16659 -28.69283 -27.25746 -26.73638 -25.21070 -24.36945 -23.17803 -22.71877 -22.32852 -20.24244 -19.01096 -18.53339 -18.08204 -17.58465 -17.43369 -16.82940 -16.56232 -16.26892 -15.80983 -15.57950 -15.30841 -15.20583 -14.99652 -14.84671 -14.69303 -14.32704 -14.16178 -14.04795 -13.72881 -13.54524 -13.52817 -13.42221 -13.19022 -13.15210 -12.88878 -12.69201 -12.54893 -12.39427 -12.20048 -12.12666 -11.91119 -11.85174 -11.75310 -11.55046 -10.98209 -10.75776 -10.74574 -10.44758 -10.43162 -10.25649 -9.59636 -8.73668 -0.52568 -0.12125 1.05641 1.07435 1.10572 1.44451 1.55920 1.74256 1.87930 1.91577 1.93844 1.95907 2.13717 2.31792 2.68098 3.06503 3.23445 3.43513 3.60859 3.72677 3.76559 3.87039 3.97373 4.08597 4.14023 4.27373 4.31579 4.37016 4.40524 4.45021 4.57767 4.58885 4.69732 4.73614 4.77760 4.80544 4.81695 4.84162 4.93348 4.98060 5.07892 5.09842 5.14508 5.24310 5.28070 5.38389 5.46243 5.59012 5.67352 5.68017 5.78495 6.26300 6.32465 6.68120 7.17526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.463 4.463 2 Si 1.061 2.939 3 C -0.466 4.466 4 C -0.420 4.420 5 C -0.118 4.118 6 C 0.063 3.937 7 N -0.588 5.588 8 C 0.590 3.410 9 O -0.585 6.585 10 C -0.327 4.327 11 C 0.144 3.856 12 C -0.128 4.128 13 C -0.057 4.057 14 C -0.084 4.084 15 O -0.546 6.546 16 Si 0.989 3.011 17 H -0.265 1.265 18 H -0.271 1.271 19 H -0.221 1.221 20 C -0.160 4.160 21 C 0.117 3.883 22 N -0.274 5.274 23 N -0.332 5.332 24 C 0.122 3.878 25 C 0.112 3.888 26 C -0.442 4.442 27 H 0.070 0.930 28 H 0.071 0.929 29 H 0.062 0.938 30 H 0.080 0.920 31 H 0.082 0.918 32 H 0.076 0.924 33 H 0.068 0.932 34 H 0.089 0.911 35 H 0.050 0.950 36 H 0.062 0.938 37 H 0.133 0.867 38 H 0.098 0.902 39 H 0.141 0.859 40 H 0.119 0.881 41 H 0.394 0.606 42 H 0.202 0.798 43 H 0.207 0.793 44 H 0.226 0.774 45 H 0.074 0.926 46 H 0.095 0.905 47 H 0.061 0.939 48 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.696 0.304 -6.629 6.672 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.570 4.570 2 Si 1.252 2.748 3 C -0.573 4.573 4 C -0.505 4.505 5 C -0.157 4.157 6 C -0.057 4.057 7 N -0.319 5.319 8 C 0.379 3.621 9 O -0.465 6.465 10 C -0.342 4.342 11 C 0.024 3.976 12 C -0.148 4.148 13 C -0.063 4.063 14 C -0.192 4.192 15 O -0.354 6.354 16 Si 0.809 3.191 17 H -0.189 1.189 18 H -0.196 1.196 19 H -0.143 1.143 20 C -0.181 4.181 21 C -0.009 4.009 22 N -0.039 5.039 23 N -0.153 5.153 24 C -0.058 4.058 25 C -0.011 4.011 26 C -0.526 4.526 27 H 0.089 0.911 28 H 0.091 0.909 29 H 0.081 0.919 30 H 0.099 0.901 31 H 0.101 0.899 32 H 0.095 0.905 33 H 0.087 0.913 34 H 0.107 0.893 35 H 0.069 0.931 36 H 0.081 0.919 37 H 0.150 0.850 38 H 0.116 0.884 39 H 0.159 0.841 40 H 0.137 0.863 41 H 0.244 0.756 42 H 0.219 0.781 43 H 0.224 0.776 44 H 0.243 0.757 45 H 0.093 0.907 46 H 0.113 0.887 47 H 0.080 0.920 48 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -0.453 -0.154 -7.181 7.197 hybrid contribution -0.315 0.105 0.999 1.053 sum -0.769 -0.049 -6.182 6.230 Atomic orbital electron populations 1.26300 1.21891 1.04129 1.04638 0.78438 0.65289 0.66411 0.64634 1.26650 1.06263 1.18726 1.05634 1.26698 0.99279 1.07916 1.16585 1.21851 0.95954 0.97865 1.00015 1.22692 1.04161 0.99560 0.79313 1.46852 1.28998 1.44813 1.11216 1.17468 0.80680 0.78431 0.85499 1.90768 1.76504 1.53589 1.25685 1.19591 1.11861 0.91467 1.11296 1.19374 0.91448 0.95089 0.91732 1.20505 1.03473 0.88645 1.02141 1.20682 0.94788 0.96664 0.94155 1.25195 0.93714 0.89079 1.11243 1.86596 1.29103 1.74326 1.45351 0.85165 0.80602 0.78558 0.74780 1.18922 1.19592 1.14272 1.21209 0.99706 0.97283 0.99860 1.22258 0.98191 0.82833 0.97574 1.46234 1.25699 1.06767 1.25182 1.77547 1.27283 0.83043 1.27433 1.24368 0.90428 1.01276 0.89707 1.20994 0.89046 1.01096 0.89977 1.27173 1.00403 1.07290 1.17744 0.91125 0.90945 0.91888 0.90101 0.89928 0.90510 0.91263 0.89268 0.93123 0.91906 0.84964 0.88435 0.84119 0.86294 0.75620 0.78140 0.77649 0.75741 0.90716 0.88726 0.92043 0.89091 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 1.38 8.65 113.37 0.98 2.36 16 2 Si 1.06 -5.63 10.05 68.60 0.69 -4.94 16 3 C -0.47 3.07 7.38 113.37 0.84 3.90 16 4 C -0.42 1.40 5.09 72.35 0.37 1.77 16 5 C -0.12 0.05 5.49 30.94 0.17 0.22 16 6 C 0.06 -0.14 5.21 86.55 0.45 0.31 16 7 N -0.59 -1.72 2.18 -834.59 -1.82 -3.54 16 8 C 0.59 5.78 6.81 86.41 0.59 6.37 16 9 O -0.58 -10.65 16.12 -4.39 -0.07 -10.72 16 10 C -0.33 -2.45 4.73 -19.90 -0.09 -2.55 16 11 C 0.14 1.05 6.79 39.49 0.27 1.31 16 12 C -0.13 -0.64 9.70 22.30 0.22 -0.43 16 13 C -0.06 0.06 4.53 -19.82 -0.09 -0.03 16 14 C -0.08 0.27 2.84 71.24 0.20 0.47 16 15 O -0.55 1.37 12.87 -148.98 -1.92 -0.55 16 16 Si 0.99 -4.85 27.27 68.60 1.87 -2.97 16 17 H -0.27 0.30 7.11 99.48 0.71 1.01 16 18 H -0.27 0.30 7.11 99.48 0.71 1.01 16 19 H -0.22 1.94 7.05 99.48 0.70 2.64 16 20 C -0.16 0.98 8.38 22.03 0.18 1.17 16 21 C 0.12 -0.37 11.17 83.31 0.93 0.56 16 22 N -0.27 -1.21 3.86 -187.28 -0.72 -1.94 16 23 N -0.33 -1.90 12.57 -56.62 -0.71 -2.62 16 24 C 0.12 0.42 9.80 85.42 0.84 1.25 16 25 C 0.11 0.26 5.82 87.90 0.51 0.77 16 26 C -0.44 0.13 4.96 72.76 0.36 0.50 16 27 H 0.07 -0.21 7.96 -2.39 -0.02 -0.23 16 28 H 0.07 -0.25 7.96 -2.39 -0.02 -0.27 16 29 H 0.06 -0.11 7.96 -2.39 -0.02 -0.13 16 30 H 0.08 -0.57 4.91 -2.39 -0.01 -0.58 16 31 H 0.08 -0.64 7.96 -2.39 -0.02 -0.66 16 32 H 0.08 -0.49 7.96 -2.39 -0.02 -0.51 16 33 H 0.07 -0.14 7.97 -2.39 -0.02 -0.16 16 34 H 0.09 -0.49 7.97 -2.39 -0.02 -0.51 16 35 H 0.05 0.19 7.39 -2.39 -0.02 0.17 16 36 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 37 H 0.13 -0.87 2.84 -2.39 -0.01 -0.88 16 38 H 0.10 -0.37 4.40 -2.39 -0.01 -0.38 16 39 H 0.14 0.90 7.95 -2.91 -0.02 0.87 16 40 H 0.12 -0.31 7.71 -2.38 -0.02 -0.33 16 41 H 0.39 -4.58 8.07 -74.06 -0.60 -5.18 16 42 H 0.20 -3.03 7.26 -2.91 -0.02 -3.05 16 43 H 0.21 -2.04 8.06 -2.91 -0.02 -2.06 16 44 H 0.23 -0.93 7.37 -2.91 -0.02 -0.95 16 45 H 0.07 0.61 6.57 -2.38 -0.02 0.59 16 46 H 0.09 -0.25 6.55 -2.39 -0.02 -0.27 16 47 H 0.06 0.20 7.96 -2.39 -0.02 0.18 16 48 H 0.09 -0.16 7.96 -2.38 -0.02 -0.18 16 Total: 0.00 -24.35 372.45 5.18 -19.16 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: 1.14 Total: -9.85 kcal Atomic # 6 Polarization: 11.24 SS G_CDS: 6.72 Total: 17.97 kcal Atomic # 7 Polarization: -4.84 SS G_CDS: -3.25 Total: -8.09 kcal Atomic # 8 Polarization: -9.28 SS G_CDS: -1.99 Total: -11.27 kcal Atomic # 14 Polarization: -10.47 SS G_CDS: 2.56 Total: -7.91 kcal Total: -24.35 5.18 -19.16 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.864 kcal (2) G-P(sol) polarization free energy of solvation -24.346 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.161 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds