Wall clock time and date at job start Thu Mar 4 2021 17:41:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35717 * 117.00206 * 2 1 4 4 C 1.38678 * 119.86311 * 0.02562 * 3 2 1 5 5 C 1.38445 * 120.03285 * 179.69862 * 4 3 2 6 6 O 1.35656 * 120.12101 * 180.27462 * 5 4 3 7 7 C 1.42901 * 117.00355 * 0.27981 * 6 5 4 8 8 C 1.40291 * 119.75615 * 0.55078 * 5 4 3 9 9 C 1.47304 * 120.13552 * 179.71974 * 8 5 4 10 10 O 1.21625 * 119.99466 * 55.28077 * 9 8 5 11 11 N 1.34772 * 120.00205 * 235.27519 * 9 8 5 12 12 C 1.47114 * 118.23225 * 355.99488 * 11 9 8 13 13 C 1.54277 * 117.97608 * 134.74291 * 12 11 9 14 14 C 1.49872 * 114.55999 * 314.21780 * 13 12 11 15 15 Si 1.88797 * 108.19395 * 84.45979 * 14 13 12 16 16 C 1.86301 * 109.43842 * 50.78074 * 15 14 13 17 17 C 1.86292 * 109.44142 * 170.70320 * 15 14 13 18 18 C 1.80384 * 109.65630 * 290.72420 * 15 14 13 19 19 C 1.42772 * 118.23046 * 175.97155 * 11 9 8 20 20 C 1.39865 * 119.73042 * 359.45121 * 8 5 4 21 21 C 1.37537 * 119.96233 * 0.26926 * 20 8 5 22 22 C 1.50704 * 119.87939 * 179.97438 * 21 20 8 23 23 O 1.42900 * 109.46780 * 255.00352 * 22 21 20 24 24 Si 1.86294 * 109.47048 * 15.00281 * 22 21 20 25 25 H 1.48502 * 109.47331 * 59.99939 * 24 22 21 26 26 H 1.48497 * 109.47506 * 180.02562 * 24 22 21 27 27 H 1.48504 * 109.47266 * 300.00087 * 24 22 21 28 28 H 1.09002 * 109.47347 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47288 * 300.00223 * 1 2 3 30 30 H 1.09008 * 109.46577 * 60.00085 * 1 2 3 31 31 H 1.08002 * 119.98438 * 359.97438 * 4 3 2 32 32 H 1.09002 * 109.46615 * 300.00169 * 7 6 5 33 33 H 1.08996 * 109.46998 * 59.99433 * 7 6 5 34 34 H 1.08994 * 109.47444 * 179.97438 * 7 6 5 35 35 H 1.09008 * 107.74831 * 256.88730 * 12 11 9 36 36 H 1.09000 * 107.75173 * 12.64755 * 12 11 9 37 37 H 1.08999 * 108.52691 * 192.86682 * 13 12 11 38 38 H 1.09001 * 108.43075 * 75.49748 * 13 12 11 39 39 H 1.08996 * 109.72186 * 324.77175 * 14 13 12 40 40 H 1.08997 * 109.72075 * 204.14927 * 14 13 12 41 41 H 1.08999 * 109.47249 * 59.99944 * 16 15 14 42 42 H 1.09004 * 109.46900 * 179.97438 * 16 15 14 43 43 H 1.08998 * 109.47486 * 299.99462 * 16 15 14 44 44 H 1.09010 * 109.47200 * 60.00155 * 17 15 14 45 45 H 1.08993 * 109.47554 * 179.97438 * 17 15 14 46 46 H 1.08997 * 109.47482 * 300.00343 * 17 15 14 47 47 H 1.09001 * 109.04428 * 178.31259 * 18 15 14 48 48 H 1.08994 * 109.04666 * 297.27432 * 18 15 14 49 49 H 1.09001 * 109.90816 * 157.52444 * 19 11 9 50 50 H 1.09002 * 109.97595 * 36.40902 * 19 11 9 51 51 H 1.07998 * 120.01534 * 180.29785 * 20 8 5 52 52 H 1.08996 * 109.47077 * 135.00332 * 22 21 20 53 53 H 0.96699 * 114.00283 * 299.99369 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 6 1.2872 2.3705 0.0005 5 6 1.9121 3.6059 0.0068 6 8 1.1723 4.7430 0.0130 7 6 -0.2488 4.5925 0.0188 8 6 3.3131 3.6775 0.0010 9 6 3.9867 4.9875 0.0014 10 8 3.7349 5.8004 0.8703 11 7 4.8819 5.2853 -0.9610 12 6 5.2238 4.2420 -1.9403 13 6 5.2777 4.6379 -3.4304 14 6 4.1203 5.4680 -3.8967 15 14 4.4907 7.2750 -3.4939 16 6 6.1828 7.7187 -4.1346 17 6 3.2155 8.3648 -4.3041 18 6 4.4416 7.5208 -1.7076 19 6 5.4470 6.5963 -0.9755 20 6 4.0678 2.4999 0.0004 21 6 3.4353 1.2787 0.0000 22 6 4.2503 0.0110 -0.0012 23 8 4.2140 -0.5773 -1.3029 24 14 6.0134 0.4060 0.4528 25 1 6.0512 1.0175 1.8056 26 1 6.8168 -0.8429 0.4511 27 1 6.5780 1.3584 -0.5368 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5139 -0.8901 31 1 0.2088 2.3111 0.0005 32 1 -0.5598 4.0455 -0.8713 33 1 -0.5520 4.0409 0.9086 34 1 -0.7183 5.5761 0.0239 35 1 6.1992 3.8381 -1.6687 36 1 4.4952 3.4379 -1.8373 37 1 5.3133 3.7279 -4.0295 38 1 6.1965 5.1977 -3.6053 39 1 3.2121 5.1550 -3.3818 40 1 3.9926 5.3496 -4.9727 41 1 6.2121 7.5735 -5.2145 42 1 6.3970 8.7620 -3.9027 43 1 6.9293 7.0805 -3.6618 44 1 2.2250 8.1047 -3.9306 45 1 3.4285 9.4081 -4.0716 46 1 3.2463 8.2193 -5.3839 47 1 4.6860 8.5594 -1.4846 48 1 3.4356 7.3070 -1.3466 49 1 6.3973 6.5851 -1.5093 50 1 5.5990 6.9476 0.0451 51 1 5.1467 2.5497 0.0008 52 1 3.8360 -0.6880 0.7253 53 1 3.3252 -0.8094 -1.6050 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_12297780.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:41:10 Heat of formation + Delta-G solvation = -140.001512 kcal Electronic energy + Delta-G solvation = -34054.814649 eV Core-core repulsion = 29823.442572 eV Total energy + Delta-G solvation = -4231.372077 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.30415 -40.97897 -40.05084 -38.42099 -37.51001 -37.03031 -34.07237 -32.71946 -32.26403 -30.84733 -29.04362 -29.02426 -28.36190 -28.15838 -27.21227 -26.09913 -25.19902 -23.66065 -22.76684 -22.21475 -20.41286 -19.69274 -18.67924 -18.57482 -17.83573 -17.45963 -17.29598 -16.86713 -16.63327 -16.56967 -16.29260 -15.89041 -15.78177 -15.54980 -15.26602 -15.01857 -14.64850 -14.42232 -14.28733 -14.15925 -13.97314 -13.93363 -13.71125 -13.53650 -13.43400 -13.31777 -13.12446 -13.08420 -12.90990 -12.66274 -12.59515 -12.56420 -12.54377 -12.27672 -12.18445 -11.95027 -11.85732 -11.51480 -11.32133 -11.11828 -10.86276 -10.75778 -10.58052 -10.19345 -9.90636 -9.69270 -9.19501 -0.18279 0.03310 1.18052 1.47264 1.48487 1.52845 1.87365 1.91818 1.96968 1.97542 2.03717 2.05418 2.11727 2.38913 2.75397 3.31053 3.48742 3.56114 3.75312 3.80953 3.96509 4.07701 4.09603 4.13389 4.19840 4.24383 4.25951 4.30034 4.33594 4.34534 4.39282 4.46348 4.57761 4.60143 4.68028 4.71304 4.75998 4.76785 4.78417 4.87981 4.88305 4.90627 4.92934 4.98235 4.99864 5.02569 5.24990 5.29830 5.36107 5.50928 5.54703 5.67200 5.77046 5.96696 6.18643 6.28146 6.70261 7.09454 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.312 6.312 3 C 0.206 3.794 4 C -0.297 4.297 5 C 0.206 3.794 6 O -0.324 6.324 7 C 0.013 3.987 8 C -0.216 4.216 9 C 0.563 3.437 10 O -0.568 6.568 11 N -0.588 5.588 12 C 0.081 3.919 13 C -0.117 4.117 14 C -0.405 4.405 15 Si 1.070 2.930 16 C -0.451 4.451 17 C -0.464 4.464 18 C -0.464 4.464 19 C 0.125 3.875 20 C -0.020 4.020 21 C -0.190 4.190 22 C -0.072 4.072 23 O -0.546 6.546 24 Si 1.009 2.991 25 H -0.252 1.252 26 H -0.263 1.263 27 H -0.244 1.244 28 H 0.124 0.876 29 H 0.066 0.934 30 H 0.071 0.929 31 H 0.168 0.832 32 H 0.077 0.923 33 H 0.070 0.930 34 H 0.114 0.886 35 H 0.080 0.920 36 H 0.084 0.916 37 H 0.089 0.911 38 H 0.080 0.920 39 H 0.058 0.942 40 H 0.088 0.912 41 H 0.075 0.925 42 H 0.069 0.931 43 H 0.077 0.923 44 H 0.058 0.942 45 H 0.066 0.934 46 H 0.074 0.926 47 H 0.084 0.916 48 H 0.053 0.947 49 H 0.110 0.890 50 H 0.061 0.939 51 H 0.147 0.853 52 H 0.087 0.913 53 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.976 -3.935 -4.340 6.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.224 6.224 3 C 0.158 3.842 4 C -0.316 4.316 5 C 0.158 3.842 6 O -0.236 6.236 7 C -0.081 4.081 8 C -0.220 4.220 9 C 0.352 3.648 10 O -0.448 6.448 11 N -0.319 5.319 12 C -0.041 4.041 13 C -0.155 4.155 14 C -0.490 4.490 15 Si 1.261 2.739 16 C -0.559 4.559 17 C -0.570 4.570 18 C -0.547 4.547 19 C 0.002 3.998 20 C -0.038 4.038 21 C -0.191 4.191 22 C -0.180 4.180 23 O -0.353 6.353 24 Si 0.829 3.171 25 H -0.176 1.176 26 H -0.188 1.188 27 H -0.167 1.167 28 H 0.143 0.857 29 H 0.084 0.916 30 H 0.090 0.910 31 H 0.186 0.814 32 H 0.095 0.905 33 H 0.089 0.911 34 H 0.132 0.868 35 H 0.098 0.902 36 H 0.102 0.898 37 H 0.108 0.892 38 H 0.098 0.902 39 H 0.077 0.923 40 H 0.107 0.893 41 H 0.094 0.906 42 H 0.088 0.912 43 H 0.096 0.904 44 H 0.077 0.923 45 H 0.085 0.915 46 H 0.093 0.907 47 H 0.103 0.897 48 H 0.072 0.928 49 H 0.128 0.872 50 H 0.079 0.921 51 H 0.164 0.836 52 H 0.105 0.895 53 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges -1.493 -3.216 -3.606 5.057 hybrid contribution -2.042 0.193 0.328 2.077 sum -3.535 -3.023 -3.277 5.690 Atomic orbital electron populations 1.23495 0.75730 1.06289 1.02637 1.86041 1.23893 1.25526 1.86952 1.18710 0.91024 0.84470 0.90002 1.21408 1.02170 0.90435 1.17602 1.18754 0.89510 0.85771 0.90197 1.86164 1.21447 1.29048 1.86910 1.23473 0.75915 1.05758 1.02910 1.18986 0.91396 0.93878 1.17776 1.18286 0.78765 0.86395 0.81318 1.90771 1.63991 1.51431 1.38595 1.47128 1.42146 1.14366 1.28292 1.22356 1.02476 0.89450 0.89769 1.21033 0.99705 1.02198 0.92576 1.25694 1.00650 1.17840 1.04807 0.78022 0.66862 0.66172 0.62868 1.26203 1.17305 1.05543 1.06830 1.26298 1.12313 1.10366 1.08051 1.27018 1.01665 1.03297 1.22728 1.20813 0.96907 0.80848 1.01253 1.20909 0.99968 0.89594 0.93323 1.19498 0.91523 0.96093 1.12017 1.25039 1.11712 0.92265 0.89005 1.86655 1.34612 1.82120 1.31913 0.84542 0.72539 0.80222 0.79752 1.17565 1.18777 1.16748 0.85746 0.91585 0.91036 0.81438 0.90463 0.91107 0.86809 0.90173 0.89783 0.89247 0.90198 0.92262 0.89280 0.90619 0.91195 0.90403 0.92290 0.91519 0.90656 0.89719 0.92768 0.87223 0.92052 0.83583 0.89498 0.77275 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.11 9.80 113.37 1.11 1.01 16 2 O -0.31 0.67 9.36 -90.38 -0.85 -0.17 16 3 C 0.21 0.25 6.62 22.60 0.15 0.40 16 4 C -0.30 -0.34 8.01 22.42 0.18 -0.16 16 5 C 0.21 1.44 6.68 22.82 0.15 1.59 16 6 O -0.32 -2.65 9.72 -87.69 -0.85 -3.50 16 7 C 0.01 -0.03 9.81 113.37 1.11 1.09 16 8 C -0.22 -1.88 4.66 -20.00 -0.09 -1.97 16 9 C 0.56 6.92 6.29 86.63 0.54 7.46 16 10 O -0.57 -11.64 16.17 -2.08 -0.03 -11.68 16 11 N -0.59 -3.40 2.45 -826.82 -2.03 -5.43 16 12 C 0.08 0.03 4.90 86.70 0.42 0.46 16 13 C -0.12 0.38 5.32 30.02 0.16 0.54 16 14 C -0.40 0.85 4.83 70.98 0.34 1.20 16 15 Si 1.07 -2.86 10.48 68.60 0.72 -2.14 16 16 C -0.45 1.83 8.35 113.37 0.95 2.78 16 17 C -0.46 0.04 8.65 113.37 0.98 1.02 16 18 C -0.46 -1.62 4.51 72.65 0.33 -1.29 16 19 C 0.12 0.53 5.38 87.74 0.47 1.00 16 20 C -0.02 -0.09 6.06 22.50 0.14 0.04 16 21 C -0.19 -0.52 5.27 -19.80 -0.10 -0.62 16 22 C -0.07 -0.07 2.32 71.24 0.17 0.10 16 23 O -0.55 -0.70 12.65 -148.98 -1.89 -2.58 16 24 Si 1.01 1.40 25.74 68.60 1.77 3.16 16 25 H -0.25 -0.55 7.11 99.48 0.71 0.15 16 26 H -0.26 -0.87 7.11 99.48 0.71 -0.16 16 27 H -0.24 -0.08 6.73 99.48 0.67 0.59 16 28 H 0.12 -1.48 8.14 -2.39 -0.02 -1.50 16 29 H 0.07 -0.62 7.65 -2.39 -0.02 -0.64 16 30 H 0.07 -0.75 7.65 -2.38 -0.02 -0.77 16 31 H 0.17 -0.80 4.50 -2.91 -0.01 -0.81 16 32 H 0.08 -0.48 7.65 -2.39 -0.02 -0.50 16 33 H 0.07 -0.33 7.67 -2.39 -0.02 -0.34 16 34 H 0.11 -0.46 8.14 -2.39 -0.02 -0.48 16 35 H 0.08 -0.20 8.12 -2.38 -0.02 -0.22 16 36 H 0.08 0.12 4.64 -2.39 -0.01 0.11 16 37 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 38 H 0.08 -0.50 5.94 -2.39 -0.01 -0.51 16 39 H 0.06 0.08 7.90 -2.39 -0.02 0.06 16 40 H 0.09 -0.38 7.99 -2.39 -0.02 -0.40 16 41 H 0.07 -0.35 7.96 -2.39 -0.02 -0.37 16 42 H 0.07 -0.24 7.96 -2.39 -0.02 -0.26 16 43 H 0.08 -0.42 6.53 -2.39 -0.02 -0.43 16 44 H 0.06 0.09 7.96 -2.38 -0.02 0.08 16 45 H 0.07 0.02 7.96 -2.39 -0.02 0.00 16 46 H 0.07 -0.11 7.96 -2.39 -0.02 -0.13 16 47 H 0.08 0.20 7.89 -2.39 -0.02 0.19 16 48 H 0.05 0.52 7.41 -2.39 -0.02 0.50 16 49 H 0.11 -0.25 7.14 -2.39 -0.02 -0.26 16 50 H 0.06 0.54 7.40 -2.39 -0.02 0.52 16 51 H 0.15 0.36 4.20 -2.91 -0.01 0.35 16 52 H 0.09 -0.09 7.82 -2.39 -0.02 -0.11 16 53 H 0.38 -1.26 8.59 -74.06 -0.64 -1.90 16 Total: 0.00 -20.29 405.92 4.86 -15.43 By element: Atomic # 1 Polarization: -8.73 SS G_CDS: 1.01 Total: -7.72 kcal Atomic # 6 Polarization: 7.63 SS G_CDS: 7.01 Total: 14.64 kcal Atomic # 7 Polarization: -3.40 SS G_CDS: -2.03 Total: -5.43 kcal Atomic # 8 Polarization: -14.31 SS G_CDS: -3.62 Total: -17.93 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: 2.48 Total: 1.02 kcal Total: -20.29 4.86 -15.43 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12297780.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.572 kcal (2) G-P(sol) polarization free energy of solvation -20.289 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.859 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.430 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds