Wall clock time and date at job start Thu Mar 4 2021 17:41:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86294 * 1 3 3 C 1.86303 * 109.44015 * 2 1 4 4 C 1.88799 * 109.44147 * 119.92423 * 2 1 3 5 5 C 1.49874 * 108.19207 * 50.78233 * 4 2 1 6 6 C 1.54333 * 114.58760 * 84.45359 * 5 4 2 7 7 N 1.47121 * 117.93537 * 314.26075 * 6 5 4 8 8 C 1.34772 * 118.22834 * 134.72079 * 7 6 5 9 9 O 1.21284 * 119.99979 * 179.97438 * 8 7 6 10 10 C 1.50705 * 120.00258 * 359.97438 * 8 7 6 11 11 C 1.50707 * 109.46966 * 179.97438 * 10 8 7 12 12 C 1.38228 * 119.99613 * 269.72037 * 11 10 8 13 13 C 1.38234 * 119.99704 * 179.74649 * 12 11 10 14 14 C 1.38237 * 120.00161 * 0.55407 * 13 12 11 15 15 C 1.50697 * 120.00236 * 179.72092 * 14 13 12 16 16 O 1.42901 * 109.47435 * 244.97773 * 15 14 13 17 17 Si 1.86300 * 109.47113 * 4.98065 * 15 14 13 18 18 H 1.48504 * 109.47338 * 59.99694 * 17 15 14 19 19 H 1.48496 * 109.46948 * 179.97438 * 17 15 14 20 20 H 1.48497 * 109.47238 * 299.99749 * 17 15 14 21 21 C 1.38234 * 119.99618 * 359.70081 * 14 13 12 22 22 C 1.38229 * 120.00025 * 0.02562 * 21 14 13 23 23 C 1.42774 * 123.53698 * 314.70878 * 7 6 5 24 24 C 1.54950 * 107.21088 * 96.96223 * 23 7 6 25 25 H 1.08996 * 109.47250 * 300.07869 * 1 2 3 26 26 H 1.09005 * 109.46871 * 60.07779 * 1 2 3 27 27 H 1.08999 * 109.47512 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46999 * 179.97438 * 3 2 1 29 29 H 1.08997 * 109.47108 * 299.92458 * 3 2 1 30 30 H 1.08996 * 109.47097 * 59.92409 * 3 2 1 31 31 H 1.09002 * 109.72754 * 170.47128 * 4 2 1 32 32 H 1.08998 * 109.72375 * 291.09767 * 4 2 1 33 33 H 1.09008 * 108.45437 * 205.85374 * 5 4 2 34 34 H 1.09000 * 108.45658 * 323.19464 * 5 4 2 35 35 H 1.09001 * 107.76556 * 192.10691 * 6 5 4 36 36 H 1.08998 * 107.69398 * 76.36579 * 6 5 4 37 37 H 1.09006 * 109.46383 * 299.99380 * 10 8 7 38 38 H 1.08998 * 109.47285 * 59.99692 * 10 8 7 39 39 H 1.08004 * 120.00493 * 0.02562 * 12 11 10 40 40 H 1.08002 * 120.00057 * 180.27206 * 13 12 11 41 41 H 1.09010 * 109.46847 * 124.97517 * 15 14 13 42 42 H 0.96701 * 113.99967 * 60.00240 * 16 15 14 43 43 H 1.07998 * 119.99849 * 180.02562 * 21 14 13 44 44 H 1.08011 * 119.99898 * 179.97438 * 22 21 14 45 45 H 1.08997 * 109.90809 * 337.53291 * 23 7 6 46 46 H 1.09004 * 109.97040 * 216.42889 * 23 7 6 47 47 H 1.09001 * 109.04513 * 163.35044 * 24 23 7 48 48 H 1.09000 * 109.04663 * 44.46738 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.4830 1.7568 0.0000 4 6 2.4913 -0.8881 1.5430 5 6 1.7982 -2.2138 1.6348 6 6 2.4535 -3.3398 0.8074 7 7 2.8527 -3.0359 -0.5756 8 6 4.0678 -3.4434 -0.9925 9 8 4.4294 -3.2104 -2.1265 10 6 4.9772 -4.1886 -0.0498 11 6 6.2642 -4.5280 -0.7566 12 6 6.3831 -5.7239 -1.4395 13 6 7.5618 -6.0329 -2.0922 14 6 8.6256 -5.1511 -2.0524 15 6 9.9127 -5.4907 -2.7587 16 8 10.9573 -5.6473 -1.7962 17 14 9.6996 -7.0796 -3.7079 18 1 8.6141 -6.9169 -4.7082 19 1 10.9678 -7.4139 -4.4044 20 1 9.3469 -8.1740 -2.7683 21 6 8.5085 -3.9575 -1.3650 22 6 7.3279 -3.6460 -0.7171 23 6 2.0222 -2.3328 -1.4999 24 6 2.4633 -0.8476 -1.4748 25 1 -0.3633 0.5150 0.8892 26 1 -0.3633 0.5127 -0.8907 27 1 -0.3634 -1.0276 0.0005 28 1 3.5730 1.7574 0.0005 29 1 2.1205 2.2700 -0.8906 30 1 2.1183 2.2708 0.8893 31 1 3.5680 -1.0404 1.4671 32 1 2.2655 -0.2929 2.4277 33 1 1.7766 -2.5202 2.6807 34 1 0.7702 -2.0900 1.2943 35 1 1.7571 -4.1777 0.7758 36 1 3.3421 -3.6714 1.3446 37 1 5.1922 -3.5639 0.8173 38 1 4.4889 -5.1070 0.2761 39 1 5.5535 -6.4149 -1.4669 40 1 7.6531 -6.9653 -2.6294 41 1 10.1716 -4.6873 -3.4485 42 1 10.7940 -6.3468 -1.1488 43 1 9.3394 -3.2683 -1.3343 44 1 7.2365 -2.7135 -0.1797 45 1 0.9782 -2.4150 -1.1977 46 1 2.1514 -2.7416 -2.5021 47 1 2.0706 -0.3449 -2.3586 48 1 3.5521 -0.7996 -1.4942 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:41:37 Heat of formation + Delta-G solvation = -83.277594 kcal Electronic energy + Delta-G solvation = -25496.855333 eV Core-core repulsion = 22060.844993 eV Total energy + Delta-G solvation = -3436.010340 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 321.167 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.46120 -40.29110 -37.78565 -37.30662 -34.44080 -33.91865 -31.97182 -31.83772 -29.61442 -28.96883 -28.52903 -27.23752 -25.91249 -23.99669 -23.78949 -22.51765 -21.82416 -19.74993 -18.44226 -18.33686 -17.38297 -17.01079 -16.83261 -16.25923 -16.19014 -15.82143 -15.54296 -15.15392 -15.00250 -14.83169 -14.60534 -14.42072 -14.18970 -14.13944 -14.06531 -13.63208 -13.58267 -13.35339 -13.27422 -13.17425 -13.01104 -12.93228 -12.78586 -12.70557 -12.27909 -12.21647 -12.12272 -11.99861 -11.81870 -11.49759 -10.88988 -10.75686 -10.64903 -10.37243 -10.36195 -9.80187 -9.61977 -9.55093 0.30428 0.52509 1.20107 1.46642 1.56933 1.65828 1.71922 1.83589 1.84977 1.95579 2.03508 2.62892 2.78856 3.49763 3.60213 3.60309 3.65418 3.78338 3.90331 3.96478 4.06137 4.17030 4.24282 4.30853 4.32219 4.39437 4.50100 4.51132 4.60248 4.63295 4.66413 4.69337 4.70841 4.71173 4.73517 4.75155 4.78175 4.94984 5.05207 5.07149 5.12742 5.28119 5.39930 5.43351 5.46351 5.50703 5.60272 5.64373 5.74023 6.05775 6.32397 6.58574 7.25331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.019 2.981 3 C -0.451 4.451 4 C -0.400 4.400 5 C -0.118 4.118 6 C 0.099 3.901 7 N -0.602 5.602 8 C 0.510 3.490 9 O -0.522 6.522 10 C -0.106 4.106 11 C -0.062 4.062 12 C -0.100 4.100 13 C -0.123 4.123 14 C -0.120 4.120 15 C -0.080 4.080 16 O -0.539 6.539 17 Si 0.950 3.050 18 H -0.250 1.250 19 H -0.255 1.255 20 H -0.252 1.252 21 C -0.087 4.087 22 C -0.104 4.104 23 C 0.132 3.868 24 C -0.452 4.452 25 H 0.068 0.932 26 H 0.069 0.931 27 H 0.068 0.932 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.074 0.926 32 H 0.078 0.922 33 H 0.078 0.922 34 H 0.064 0.936 35 H 0.066 0.934 36 H 0.081 0.919 37 H 0.105 0.895 38 H 0.104 0.896 39 H 0.123 0.877 40 H 0.120 0.880 41 H 0.117 0.883 42 H 0.376 0.624 43 H 0.127 0.873 44 H 0.122 0.878 45 H 0.078 0.922 46 H 0.082 0.918 47 H 0.082 0.918 48 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.361 -0.719 4.677 5.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.213 2.787 3 C -0.559 4.559 4 C -0.486 4.486 5 C -0.157 4.157 6 C -0.024 4.024 7 N -0.336 5.336 8 C 0.298 3.702 9 O -0.397 6.397 10 C -0.145 4.145 11 C -0.063 4.063 12 C -0.118 4.118 13 C -0.141 4.141 14 C -0.120 4.120 15 C -0.191 4.191 16 O -0.343 6.343 17 Si 0.773 3.227 18 H -0.174 1.174 19 H -0.179 1.179 20 H -0.176 1.176 21 C -0.105 4.105 22 C -0.122 4.122 23 C 0.009 3.991 24 C -0.539 4.539 25 H 0.087 0.913 26 H 0.088 0.912 27 H 0.087 0.913 28 H 0.086 0.914 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.093 0.907 32 H 0.097 0.903 33 H 0.096 0.904 34 H 0.082 0.918 35 H 0.084 0.916 36 H 0.099 0.901 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.141 0.859 40 H 0.137 0.863 41 H 0.135 0.865 42 H 0.223 0.777 43 H 0.145 0.855 44 H 0.140 0.860 45 H 0.097 0.903 46 H 0.100 0.900 47 H 0.101 0.899 48 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -3.031 -0.903 3.241 4.528 hybrid contribution -0.375 0.122 0.531 0.661 sum -3.406 -0.780 3.771 5.142 Atomic orbital electron populations 1.26228 1.20777 1.04239 1.04504 0.78799 0.66967 0.66512 0.66416 1.26135 1.06221 1.19121 1.04388 1.25624 1.04919 1.02726 1.15286 1.21017 0.99988 0.94518 1.00130 1.21901 1.01412 0.97746 0.81316 1.47174 1.16751 1.57445 1.12215 1.20596 0.81699 0.79393 0.88520 1.90754 1.73292 1.55689 1.19955 1.20791 0.93436 1.01982 0.98327 1.19300 0.94024 0.94655 0.98287 1.20876 0.97336 0.96609 0.96971 1.20979 0.93766 0.99182 1.00168 1.20273 0.95837 0.95726 1.00170 1.24974 0.86619 1.11526 0.95996 1.86518 1.42672 1.60049 1.45110 0.85675 0.80809 0.76328 0.79857 1.17392 1.17902 1.17608 1.20951 0.97416 0.96028 0.96151 1.21014 0.92906 0.98746 0.99548 1.20645 0.93837 0.90490 0.94139 1.26717 1.07522 1.02767 1.16850 0.91256 0.91183 0.91298 0.91364 0.91307 0.91267 0.90728 0.90326 0.90364 0.91765 0.91598 0.90069 0.87673 0.87798 0.85939 0.86269 0.86490 0.77736 0.85482 0.86005 0.90342 0.90015 0.89911 0.89981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.97 8.35 101.05 0.84 1.81 16 2 Si 1.02 -2.64 10.48 -169.99 -1.78 -4.42 16 3 C -0.45 0.47 8.65 101.05 0.87 1.34 16 4 C -0.40 1.12 4.83 35.61 0.17 1.29 16 5 C -0.12 0.41 5.32 -27.58 -0.15 0.27 16 6 C 0.10 -0.31 5.83 -3.00 -0.02 -0.33 16 7 N -0.60 0.34 2.45 -173.97 -0.43 -0.09 16 8 C 0.51 0.82 7.19 -10.99 -0.08 0.74 16 9 O -0.52 -3.08 15.25 5.55 0.08 -3.00 16 10 C -0.11 0.10 4.11 -29.03 -0.12 -0.02 16 11 C -0.06 -0.09 4.37 -104.62 -0.46 -0.54 16 12 C -0.10 -0.16 9.70 -39.59 -0.38 -0.54 16 13 C -0.12 -0.21 8.67 -39.58 -0.34 -0.56 16 14 C -0.12 -0.21 5.35 -104.63 -0.56 -0.77 16 15 C -0.08 -0.06 2.80 36.00 0.10 0.05 16 16 O -0.54 -0.56 12.83 -35.23 -0.45 -1.01 16 17 Si 0.95 0.39 25.14 -169.99 -4.27 -3.88 16 18 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 19 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 20 H -0.25 -0.07 7.04 56.52 0.40 0.33 16 21 C -0.09 -0.17 9.69 -39.59 -0.38 -0.55 16 22 C -0.10 -0.17 9.70 -39.59 -0.38 -0.55 16 23 C 0.13 -0.02 5.36 -4.97 -0.03 -0.05 16 24 C -0.45 0.18 4.47 38.19 0.17 0.36 16 25 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 26 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 27 H 0.07 -0.17 6.53 -51.93 -0.34 -0.51 16 28 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 29 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.07 -0.17 7.90 -51.93 -0.41 -0.58 16 32 H 0.08 -0.24 7.99 -51.93 -0.42 -0.65 16 33 H 0.08 -0.33 8.14 -51.92 -0.42 -0.75 16 34 H 0.06 -0.24 5.94 -51.93 -0.31 -0.55 16 35 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 36 H 0.08 -0.36 5.49 -51.93 -0.29 -0.64 16 37 H 0.11 -0.31 7.38 -51.93 -0.38 -0.70 16 38 H 0.10 -0.32 7.87 -51.93 -0.41 -0.73 16 39 H 0.12 -0.01 8.06 -52.48 -0.42 -0.43 16 40 H 0.12 0.06 4.87 -52.49 -0.26 -0.20 16 41 H 0.12 0.02 7.96 -51.92 -0.41 -0.40 16 42 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 43 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 44 H 0.12 0.01 8.06 -52.48 -0.42 -0.41 16 45 H 0.08 -0.17 7.14 -51.93 -0.37 -0.54 16 46 H 0.08 0.15 7.46 -51.93 -0.39 -0.24 16 47 H 0.08 -0.04 7.89 -51.93 -0.41 -0.45 16 48 H 0.08 0.13 7.28 -51.93 -0.38 -0.25 16 LS Contribution 372.49 15.07 5.61 5.61 Total: 0.00 -7.14 372.49 -9.32 -16.46 By element: Atomic # 1 Polarization: -4.26 SS G_CDS: -7.35 Total: -11.61 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: -0.74 Total: 1.93 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.43 Total: -0.09 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.37 Total: -4.01 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: -6.06 Total: -8.30 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -7.14 -9.32 -16.46 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.813 kcal (2) G-P(sol) polarization free energy of solvation -7.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.465 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds