Wall clock time and date at job start Thu Mar 4 2021 17:41:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86299 * 109.00862 * 2 1 4 4 C 1.86974 * 109.02105 * 118.90949 * 2 1 3 5 5 C 1.54093 * 109.19985 * 80.36260 * 4 2 1 6 6 C 1.52373 * 108.11800 * 321.40308 * 5 4 2 7 7 N 1.45473 * 105.78535 * 102.41408 * 6 5 4 8 8 C 1.34775 * 116.96743 * 80.98344 * 7 6 5 9 9 O 1.21592 * 120.00095 * 194.42559 * 8 7 6 10 10 C 1.47583 * 119.99914 * 14.42445 * 8 7 6 11 11 C 1.40199 * 119.83283 * 330.20837 * 10 8 7 12 12 C 1.36228 * 120.37982 * 179.75319 * 11 10 8 13 13 C 1.39877 * 119.96012 * 0.52740 * 12 11 10 14 14 C 1.46260 * 133.84606 * 179.73795 * 13 12 11 15 15 C 1.50699 * 126.47998 * 359.97367 * 14 13 12 16 16 O 1.42894 * 109.46849 * 284.99891 * 15 14 13 17 17 Si 1.86298 * 109.46941 * 165.00076 * 15 14 13 18 18 H 1.48509 * 109.47153 * 59.99760 * 17 15 14 19 19 H 1.48502 * 109.47133 * 179.97438 * 17 15 14 20 20 H 1.48504 * 109.47266 * 300.00129 * 17 15 14 21 21 C 1.34451 * 107.03217 * 179.97438 * 14 13 12 22 22 N 1.36560 * 109.98991 * 359.97438 * 21 14 13 23 23 C 1.37827 * 109.85882 * 359.97438 * 22 21 14 24 24 C 1.38650 * 133.37581 * 179.97438 * 23 22 21 25 25 C 1.42434 * 126.06789 * 261.00235 * 7 6 5 26 26 C 1.55256 * 107.53715 * 64.18681 * 25 7 6 27 27 H 1.08996 * 109.47470 * 280.64935 * 1 2 3 28 28 H 1.09003 * 109.47189 * 40.65520 * 1 2 3 29 29 H 1.09001 * 109.46939 * 160.64708 * 1 2 3 30 30 H 1.08999 * 109.47069 * 178.90386 * 3 2 1 31 31 H 1.09001 * 109.47414 * 298.90861 * 3 2 1 32 32 H 1.09002 * 109.46576 * 58.90773 * 3 2 1 33 33 H 1.09003 * 109.51424 * 320.45082 * 4 2 1 34 34 H 1.08994 * 109.56352 * 200.31353 * 4 2 1 35 35 H 1.08996 * 109.73598 * 201.74051 * 5 4 2 36 36 H 1.09005 * 109.76909 * 81.08098 * 5 4 2 37 37 H 1.09005 * 110.17708 * 343.34968 * 6 5 4 38 38 H 1.08999 * 110.28870 * 221.54163 * 6 5 4 39 39 H 1.08007 * 119.81009 * 0.02684 * 11 10 8 40 40 H 1.07999 * 120.02106 * 180.23818 * 12 11 10 41 41 H 1.08994 * 109.47062 * 45.00057 * 15 14 13 42 42 H 0.96701 * 114.00238 * 300.00199 * 16 15 14 43 43 H 1.08008 * 125.00218 * 179.97438 * 21 14 13 44 44 H 0.97000 * 125.06945 * 180.02562 * 22 21 14 45 45 H 1.07996 * 120.16844 * 359.97438 * 24 23 22 46 46 H 1.08998 * 109.85380 * 183.71310 * 25 7 6 47 47 H 1.09000 * 109.85543 * 304.66016 * 25 7 6 48 48 H 1.08997 * 109.50961 * 57.39812 * 26 25 7 49 49 H 1.09000 * 109.51053 * 177.55112 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4698 1.7614 0.0000 4 6 2.4724 -0.8545 1.5474 5 6 2.4072 -2.3804 1.3427 6 6 1.1379 -2.7001 0.5628 7 7 1.5658 -2.9480 -0.8053 8 6 2.0600 -4.1717 -1.0789 9 8 2.6704 -4.3636 -2.1128 10 6 1.8602 -5.2787 -0.1235 11 6 1.7528 -5.0059 1.2475 12 6 1.5633 -6.0187 2.1387 13 6 1.4859 -7.3405 1.6878 14 6 1.2989 -8.6290 2.3542 15 6 1.1289 -8.8559 3.8343 16 8 2.3909 -8.7045 4.4873 17 14 0.4802 -10.5774 4.1281 18 1 1.4420 -11.5687 3.5824 19 1 0.3133 -10.8012 5.5866 20 1 -0.8313 -10.7347 3.4494 21 6 1.3072 -9.5726 1.3964 22 7 1.4837 -8.9937 0.1723 23 6 1.5959 -7.6271 0.3124 24 6 1.7827 -6.5897 -0.5883 25 6 1.5116 -2.0177 -1.8825 26 6 2.4664 -0.8437 -1.5354 27 1 -0.3634 0.1899 1.0099 28 1 -0.3634 0.7796 -0.6695 29 1 -0.3633 -0.9696 -0.3406 30 1 3.5596 1.7703 0.0197 31 1 2.1185 2.2668 -0.8996 32 1 2.0863 2.2777 0.8801 33 1 1.8421 -0.5731 2.3910 34 1 3.5019 -0.5575 1.7470 35 1 2.3804 -2.8808 2.3106 36 1 3.2789 -2.7145 0.7799 37 1 0.4533 -1.8524 0.5949 38 1 0.6558 -3.5876 0.9727 39 1 1.8163 -3.9865 1.5987 40 1 1.4775 -5.8016 3.1931 41 1 0.4231 -8.1283 4.2347 42 1 3.0693 -9.3214 4.1800 43 1 1.1915 -10.6323 1.5698 44 1 1.5233 -9.4727 -0.6703 45 1 1.8704 -6.7972 -1.6445 46 1 1.8372 -2.4995 -2.8044 47 1 0.4939 -1.6451 -1.9990 48 1 3.4716 -1.2298 -1.3665 49 1 2.4828 -0.1317 -2.3605 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:41:49 Heat of formation + Delta-G solvation = 22.980174 kcal Electronic energy + Delta-G solvation = -29115.417136 eV Core-core repulsion = 25362.136286 eV Total energy + Delta-G solvation = -3753.280849 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 346.163 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.61738 -41.64997 -38.10834 -37.90850 -37.46232 -34.35497 -33.21456 -31.94488 -30.69784 -29.99147 -29.34246 -28.81539 -27.08417 -26.46724 -25.13416 -23.71896 -22.85137 -22.69881 -20.84097 -20.23414 -19.23534 -18.66330 -17.64698 -17.40293 -16.84122 -16.42813 -16.15197 -16.09193 -15.75326 -15.29016 -15.16300 -15.04289 -14.85744 -14.72252 -14.62992 -14.52622 -14.34824 -13.95204 -13.88599 -13.66933 -13.61154 -13.32195 -13.10685 -12.81052 -12.71915 -12.52947 -12.47976 -12.44862 -12.10964 -12.08269 -11.96624 -11.80320 -11.47569 -10.89343 -10.78476 -10.68613 -10.54812 -10.45385 -10.31490 -9.52677 -9.21932 -8.72722 -0.15441 0.48690 1.15900 1.35907 1.41886 1.51028 1.72951 1.74383 1.78093 1.88757 1.90540 2.04142 2.24088 2.55895 2.92281 3.46734 3.57857 3.65051 3.72757 3.81586 3.91992 3.96022 4.17345 4.22936 4.29682 4.35330 4.38207 4.44659 4.52916 4.56984 4.61453 4.64308 4.66612 4.70406 4.70887 4.72155 4.74968 4.81638 4.87420 4.98352 5.05115 5.17572 5.26309 5.33407 5.39477 5.46968 5.49055 5.52506 5.56044 5.68868 5.81327 6.07368 6.34037 6.40652 6.64366 7.26347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.462 4.462 2 Si 1.005 2.995 3 C -0.450 4.450 4 C -0.409 4.409 5 C -0.139 4.139 6 C 0.036 3.964 7 N -0.598 5.598 8 C 0.555 3.445 9 O -0.533 6.533 10 C -0.116 4.116 11 C -0.172 4.172 12 C -0.074 4.074 13 C -0.064 4.064 14 C -0.209 4.209 15 C -0.043 4.043 16 O -0.540 6.540 17 Si 0.946 3.054 18 H -0.254 1.254 19 H -0.250 1.250 20 H -0.251 1.251 21 C 0.065 3.935 22 N -0.585 5.585 23 C 0.082 3.918 24 C -0.064 4.064 25 C 0.119 3.881 26 C -0.431 4.431 27 H 0.072 0.928 28 H 0.072 0.928 29 H 0.077 0.923 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.069 0.931 33 H 0.080 0.920 34 H 0.077 0.923 35 H 0.085 0.915 36 H 0.078 0.922 37 H 0.113 0.887 38 H 0.119 0.881 39 H 0.183 0.817 40 H 0.131 0.869 41 H 0.114 0.886 42 H 0.374 0.626 43 H 0.172 0.828 44 H 0.421 0.579 45 H 0.130 0.870 46 H 0.099 0.901 47 H 0.072 0.928 48 H 0.080 0.920 49 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.712 -0.473 2.168 3.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.568 4.568 2 Si 1.200 2.800 3 C -0.557 4.557 4 C -0.495 4.495 5 C -0.176 4.176 6 C -0.085 4.085 7 N -0.330 5.330 8 C 0.344 3.656 9 O -0.410 6.410 10 C -0.121 4.121 11 C -0.190 4.190 12 C -0.093 4.093 13 C -0.069 4.069 14 C -0.217 4.217 15 C -0.154 4.154 16 O -0.345 6.345 17 Si 0.768 3.232 18 H -0.177 1.177 19 H -0.174 1.174 20 H -0.174 1.174 21 C -0.063 4.063 22 N -0.187 5.187 23 C -0.024 4.024 24 C -0.085 4.085 25 C -0.003 4.003 26 C -0.518 4.518 27 H 0.092 0.908 28 H 0.091 0.909 29 H 0.095 0.905 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.098 0.902 34 H 0.096 0.904 35 H 0.103 0.897 36 H 0.097 0.903 37 H 0.131 0.869 38 H 0.136 0.864 39 H 0.199 0.801 40 H 0.148 0.852 41 H 0.132 0.868 42 H 0.221 0.779 43 H 0.189 0.811 44 H 0.258 0.742 45 H 0.148 0.852 46 H 0.117 0.883 47 H 0.090 0.910 48 H 0.099 0.901 49 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.034 -0.986 1.948 3.738 hybrid contribution 0.510 -0.300 -0.889 1.068 sum -2.524 -1.286 1.059 3.025 Atomic orbital electron populations 1.26657 1.20665 1.04601 1.04895 0.79287 0.67092 0.66662 0.66987 1.26139 1.06194 1.18970 1.04445 1.26534 1.06883 1.00698 1.15389 1.22114 0.98124 0.96471 1.00931 1.23184 0.98094 1.05980 0.81216 1.46686 1.63215 1.12775 1.10331 1.18477 0.78395 0.82947 0.85763 1.90782 1.39260 1.83427 1.27581 1.19443 1.06220 0.92509 0.93915 1.22814 1.01087 1.03037 0.92088 1.20303 0.99023 0.90050 0.99921 1.19185 1.02915 0.93441 0.91321 1.20719 1.13834 0.91655 0.95515 1.24254 0.90375 1.12553 0.88255 1.86516 1.21337 1.62801 1.63816 0.85802 0.80553 0.75058 0.81767 1.17746 1.17379 1.17412 1.21757 1.02298 0.98404 0.83873 1.41688 1.63185 1.05074 1.08777 1.18065 1.05530 0.83782 0.95057 1.20005 1.00302 0.89461 0.98781 1.20906 0.99171 0.89529 0.90733 1.26949 1.04750 1.04301 1.15775 0.90845 0.90891 0.90477 0.91285 0.91245 0.91228 0.90164 0.90405 0.89710 0.90302 0.86928 0.86404 0.80064 0.85157 0.86780 0.77901 0.81135 0.74171 0.85200 0.88282 0.91001 0.90116 0.89687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 1.19 7.40 101.05 0.75 1.94 16 2 Si 1.00 -2.76 10.04 -169.99 -1.71 -4.47 16 3 C -0.45 0.66 8.65 101.05 0.87 1.54 16 4 C -0.41 0.97 5.08 37.73 0.19 1.17 16 5 C -0.14 0.23 4.28 -26.48 -0.11 0.12 16 6 C 0.04 -0.06 4.93 -4.91 -0.02 -0.08 16 7 N -0.60 -0.46 2.19 -178.95 -0.39 -0.85 16 8 C 0.55 2.00 6.70 -12.45 -0.08 1.92 16 9 O -0.53 -3.78 15.79 5.29 0.08 -3.69 16 10 C -0.12 -0.30 5.62 -104.95 -0.59 -0.89 16 11 C -0.17 -0.13 7.11 -39.57 -0.28 -0.41 16 12 C -0.07 -0.08 10.03 -39.69 -0.40 -0.48 16 13 C -0.06 -0.13 6.35 -105.04 -0.67 -0.80 16 14 C -0.21 -0.09 5.57 -102.74 -0.57 -0.66 16 15 C -0.04 0.03 3.06 36.01 0.11 0.14 16 16 O -0.54 -0.14 12.88 -35.23 -0.45 -0.60 16 17 Si 0.95 -1.43 26.08 -169.99 -4.43 -5.86 16 18 H -0.25 0.47 7.03 56.52 0.40 0.87 16 19 H -0.25 -0.05 7.11 56.52 0.40 0.36 16 20 H -0.25 0.19 7.11 56.52 0.40 0.59 16 21 C 0.07 -0.06 10.43 -16.78 -0.18 -0.24 16 22 N -0.58 0.31 6.07 -10.68 -0.06 0.25 16 23 C 0.08 0.16 7.26 -84.00 -0.61 -0.45 16 24 C -0.06 -0.17 9.61 -39.03 -0.37 -0.54 16 25 C 0.12 0.05 5.78 -4.98 -0.03 0.03 16 26 C -0.43 0.31 4.96 38.35 0.19 0.50 16 27 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 28 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 29 H 0.08 -0.20 4.92 -51.93 -0.26 -0.45 16 30 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 32 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 33 H 0.08 -0.26 7.97 -51.93 -0.41 -0.67 16 34 H 0.08 -0.15 7.97 -51.93 -0.41 -0.57 16 35 H 0.08 -0.24 6.76 -51.93 -0.35 -0.59 16 36 H 0.08 0.00 7.39 -51.93 -0.38 -0.38 16 37 H 0.11 -0.35 2.83 -51.93 -0.15 -0.49 16 38 H 0.12 -0.23 4.48 -51.97 -0.23 -0.46 16 39 H 0.18 -0.26 1.27 -67.12 -0.09 -0.34 16 40 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 41 H 0.11 -0.14 7.96 -51.93 -0.41 -0.55 16 42 H 0.37 -1.05 8.70 45.56 0.40 -0.65 16 43 H 0.17 -0.63 6.29 -52.48 -0.33 -0.96 16 44 H 0.42 -1.35 8.96 -40.82 -0.37 -1.72 16 45 H 0.13 0.30 7.90 -52.49 -0.41 -0.11 16 46 H 0.10 0.25 6.69 -51.93 -0.35 -0.10 16 47 H 0.07 -0.09 6.58 -51.93 -0.34 -0.44 16 48 H 0.08 0.05 7.95 -51.93 -0.41 -0.36 16 49 H 0.08 -0.11 7.96 -51.93 -0.41 -0.52 16 LS Contribution 367.56 15.07 5.54 5.54 Total: 0.00 -8.21 367.56 -9.45 -17.66 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -6.22 Total: -10.75 kcal Atomic # 6 Polarization: 4.59 SS G_CDS: -1.80 Total: 2.79 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.46 Total: -0.61 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -0.37 Total: -4.29 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: -6.14 Total: -10.33 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.21 -9.45 -17.66 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.636 kcal (2) G-P(sol) polarization free energy of solvation -8.206 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.655 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.980 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds