Wall clock time and date at job start Thu Mar 4 2021 18:05:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86299 * 109.00588 * 2 1 4 4 C 1.86973 * 109.02164 * 241.16640 * 2 1 3 5 5 C 1.54218 * 109.28869 * 199.06442 * 4 2 1 6 6 C 1.52382 * 108.06412 * 321.63752 * 5 4 2 7 7 N 1.45481 * 105.89577 * 102.24071 * 6 5 4 8 8 C 1.34778 * 116.96395 * 80.91310 * 7 6 5 9 9 O 1.21594 * 119.99545 * 194.46876 * 8 7 6 10 10 C 1.47568 * 120.00200 * 14.47058 * 8 7 6 11 11 C 1.36500 * 120.00830 * 149.95699 * 10 8 7 12 12 N 1.35951 * 120.50390 * 179.76265 * 11 10 8 13 13 C 1.36995 * 132.41387 * 180.20598 * 12 11 10 14 14 C 1.50706 * 126.42627 * 0.25305 * 13 12 11 15 15 O 1.42898 * 109.47246 * 30.00675 * 14 13 12 16 16 Si 1.86303 * 109.46631 * 150.00062 * 14 13 12 17 17 H 1.48502 * 109.47433 * 60.00604 * 16 14 13 18 18 H 1.48509 * 109.46825 * 180.02562 * 16 14 13 19 19 H 1.48503 * 109.47469 * 299.99795 * 16 14 13 20 20 C 1.34999 * 107.14530 * 180.27814 * 13 12 11 21 21 N 1.33586 * 108.65600 * 359.97438 * 20 13 12 22 22 C 1.32412 * 109.21902 * 0.02562 * 21 20 13 23 23 C 1.41252 * 132.11312 * 180.02562 * 22 21 20 24 24 Br 1.89097 * 120.25627 * 359.95050 * 23 22 21 25 25 C 1.35706 * 119.48744 * 179.97438 * 23 22 21 26 26 C 1.42428 * 126.06699 * 260.88033 * 7 6 5 27 27 C 1.55259 * 107.47138 * 64.26936 * 26 7 6 28 28 H 1.09001 * 109.47016 * 301.09566 * 1 2 3 29 29 H 1.08997 * 109.46977 * 61.09231 * 1 2 3 30 30 H 1.09000 * 109.47172 * 181.09558 * 1 2 3 31 31 H 1.09000 * 109.47197 * 159.80435 * 3 2 1 32 32 H 1.09006 * 109.47235 * 279.80441 * 3 2 1 33 33 H 1.08996 * 109.47395 * 39.80605 * 3 2 1 34 34 H 1.09002 * 109.51558 * 319.09976 * 4 2 1 35 35 H 1.09002 * 109.51558 * 79.21445 * 4 2 1 36 36 H 1.08997 * 109.95809 * 201.87875 * 5 4 2 37 37 H 1.08994 * 109.55155 * 81.15951 * 5 4 2 38 38 H 1.08996 * 110.18042 * 343.10932 * 6 5 4 39 39 H 1.09000 * 110.17782 * 221.37137 * 6 5 4 40 40 H 1.08002 * 119.74685 * 359.97438 * 11 10 8 41 41 H 1.08997 * 109.47155 * 269.99832 * 14 13 12 42 42 H 0.96697 * 114.00030 * 59.99375 * 15 14 13 43 43 H 1.08001 * 125.67387 * 180.02562 * 20 13 12 44 44 H 1.08001 * 120.23458 * 180.02562 * 25 23 22 45 45 H 1.08997 * 109.86141 * 183.75334 * 26 7 6 46 46 H 1.08997 * 109.85984 * 304.70981 * 26 7 6 47 47 H 1.08989 * 109.51645 * 57.36555 * 27 26 7 48 48 H 1.09001 * 109.50994 * 177.52304 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4698 1.7614 0.0000 4 6 2.4724 -0.8525 -1.5485 5 6 3.9391 -1.2850 -1.3483 6 6 4.6520 -0.1897 -0.5646 7 7 4.7482 -0.6765 0.8030 8 6 5.7456 -1.5412 1.0751 9 8 5.7291 -2.1826 2.1080 10 6 6.8574 -1.7096 0.1196 11 6 8.1006 -2.0468 0.5713 12 7 9.1311 -2.2092 -0.3005 13 6 10.4481 -2.5420 -0.1228 14 6 11.1272 -2.8373 1.1898 15 8 10.1800 -3.3994 2.1003 16 14 12.5154 -4.0482 0.9119 17 1 13.4998 -3.4642 -0.0343 18 1 13.1843 -4.3398 2.2053 19 1 11.9686 -5.3064 0.3433 20 6 11.0235 -2.5550 -1.3439 21 7 10.0987 -2.2418 -2.2555 22 6 8.9422 -2.0273 -1.6473 23 6 7.6656 -1.6733 -2.1373 24 35 7.3933 -1.4198 -3.9913 25 6 6.6361 -1.5160 -1.2672 26 6 3.8870 -0.3237 1.8811 27 6 2.4671 -0.8469 1.5339 28 1 -0.3633 0.5308 0.8800 29 1 -0.3633 0.4968 -0.8996 30 1 -0.3633 -1.0275 0.0196 31 1 3.5000 1.7909 0.3548 32 1 2.4226 2.1620 -1.0127 33 1 1.8417 2.3621 0.6579 34 1 1.8570 -1.7298 -1.7474 35 1 2.4094 -0.1646 -2.3917 36 1 4.4227 -1.4196 -2.3158 37 1 3.9707 -2.2189 -0.7873 38 1 4.0723 0.7328 -0.5954 39 1 5.6477 -0.0212 -0.9747 40 1 8.2661 -2.1890 1.6291 41 1 11.5286 -1.9139 1.6071 42 1 9.7813 -4.2251 1.7931 43 1 12.0592 -2.7819 -1.5497 44 1 5.6549 -1.2459 -1.6287 45 1 4.2377 -0.7886 2.8025 46 1 3.8651 0.7597 1.9983 47 1 2.5069 -1.9228 1.3640 48 1 1.7882 -0.6327 2.3594 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:11 Heat of formation + Delta-G solvation = 63.277325 kcal Electronic energy + Delta-G solvation = -31999.694584 eV Core-core repulsion = 27842.917236 eV Total energy + Delta-G solvation = -4156.777348 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 425.068 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -44.23237 -42.18335 -38.66095 -38.29551 -38.07517 -35.33850 -34.46700 -32.87850 -31.86867 -31.05364 -30.21420 -29.45487 -28.91604 -27.61069 -26.59274 -25.86224 -24.11839 -23.44801 -22.99023 -22.44508 -20.65864 -19.62042 -18.76052 -18.21039 -17.88369 -17.44362 -17.26620 -16.58908 -16.44275 -16.13411 -15.95978 -15.74430 -15.41798 -15.22248 -15.10867 -14.83127 -14.75871 -14.60473 -14.05910 -13.88903 -13.83847 -13.75829 -13.42375 -13.39921 -13.14953 -12.98995 -12.92523 -12.80245 -12.79649 -12.53116 -12.25322 -12.19364 -12.14265 -11.93003 -11.45090 -11.28801 -11.21205 -11.05884 -10.99862 -10.91604 -10.69047 -10.61733 -9.99656 -9.76642 -8.98339 -0.81117 -0.30366 0.26638 0.80356 1.21899 1.27850 1.35844 1.44056 1.61584 1.64185 1.66815 1.75749 1.87039 1.93295 2.20720 2.44804 2.86267 2.94194 3.03119 3.32755 3.38483 3.49794 3.59963 3.70565 3.84539 4.01495 4.05291 4.17495 4.20945 4.23559 4.25848 4.38864 4.40780 4.44767 4.51399 4.53371 4.58884 4.61603 4.64250 4.65023 4.68565 4.83536 4.98332 5.02121 5.16270 5.27664 5.31672 5.37146 5.42140 5.53492 5.65152 6.01908 6.17627 6.57700 6.91180 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.004 2.996 3 C -0.464 4.464 4 C -0.408 4.408 5 C -0.145 4.145 6 C 0.035 3.965 7 N -0.593 5.593 8 C 0.567 3.433 9 O -0.519 6.519 10 C -0.169 4.169 11 C 0.157 3.843 12 N -0.352 5.352 13 C -0.089 4.089 14 C -0.051 4.051 15 O -0.541 6.541 16 Si 0.972 3.028 17 H -0.243 1.243 18 H -0.244 1.244 19 H -0.247 1.247 20 C 0.042 3.958 21 N -0.464 5.464 22 C 0.244 3.756 23 C -0.069 4.069 24 Br 0.005 6.995 25 C -0.099 4.099 26 C 0.119 3.881 27 C -0.431 4.431 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.080 0.920 35 H 0.082 0.918 36 H 0.086 0.914 37 H 0.081 0.919 38 H 0.122 0.878 39 H 0.109 0.891 40 H 0.191 0.809 41 H 0.126 0.874 42 H 0.380 0.620 43 H 0.190 0.810 44 H 0.207 0.793 45 H 0.103 0.897 46 H 0.076 0.924 47 H 0.082 0.918 48 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.083 2.110 0.270 2.977 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.199 2.801 3 C -0.570 4.570 4 C -0.494 4.494 5 C -0.183 4.183 6 C -0.086 4.086 7 N -0.325 5.325 8 C 0.354 3.646 9 O -0.395 6.395 10 C -0.176 4.176 11 C 0.031 3.969 12 N -0.025 5.025 13 C -0.200 4.200 14 C -0.161 4.161 15 O -0.346 6.346 16 Si 0.791 3.209 17 H -0.166 1.166 18 H -0.167 1.167 19 H -0.170 1.170 20 C -0.109 4.109 21 N -0.182 5.182 22 C -0.001 4.001 23 C -0.151 4.151 24 Br 0.090 6.910 25 C -0.123 4.123 26 C -0.004 4.004 27 C -0.518 4.518 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.093 0.907 34 H 0.099 0.901 35 H 0.101 0.899 36 H 0.104 0.896 37 H 0.100 0.900 38 H 0.139 0.861 39 H 0.126 0.874 40 H 0.208 0.792 41 H 0.144 0.856 42 H 0.228 0.772 43 H 0.207 0.793 44 H 0.223 0.777 45 H 0.121 0.879 46 H 0.094 0.906 47 H 0.101 0.899 48 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.159 1.844 -0.458 2.226 hybrid contribution -0.604 -0.139 0.841 1.044 sum -1.763 1.706 0.383 2.483 Atomic orbital electron populations 1.26127 1.20515 1.04527 1.04558 0.79310 0.67133 0.66866 0.66805 1.26663 1.05953 1.19304 1.05064 1.26553 0.98995 1.08136 1.15709 1.22188 0.96277 0.99039 1.00805 1.23157 1.04241 0.99984 0.81202 1.46653 1.30087 1.45305 1.10476 1.17820 0.81630 0.79919 0.85189 1.90845 1.77592 1.44175 1.26932 1.19311 0.94104 1.10068 0.94153 1.22101 0.85093 0.92600 0.97152 1.42578 1.08240 1.43575 1.08136 1.22051 0.82816 1.15514 0.99657 1.24849 0.99135 1.06531 0.85570 1.86503 1.59570 1.43447 1.45039 0.85408 0.76172 0.77792 0.81566 1.16604 1.16722 1.17036 1.22502 1.00100 1.01318 0.86958 1.70861 0.97070 1.19424 1.30832 1.20512 0.95281 1.04629 0.79682 1.20522 0.91543 1.09251 0.93827 1.96835 1.96121 1.95434 1.02584 1.23323 1.02494 0.95038 0.91413 1.20993 0.88796 1.00253 0.90335 1.26942 1.00666 1.08279 1.15881 0.91162 0.91156 0.91222 0.90566 0.90721 0.90702 0.90098 0.89918 0.89623 0.89997 0.86084 0.87374 0.79186 0.85594 0.77201 0.79306 0.77724 0.87914 0.90591 0.89946 0.89387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.11 8.65 101.05 0.87 1.98 16 2 Si 1.00 -3.99 10.05 -169.99 -1.71 -5.70 16 3 C -0.46 1.70 7.38 101.05 0.75 2.45 16 4 C -0.41 1.45 5.08 37.79 0.19 1.64 16 5 C -0.15 0.42 4.30 -26.41 -0.11 0.31 16 6 C 0.04 -0.10 4.92 -4.91 -0.02 -0.13 16 7 N -0.59 0.64 2.19 -177.94 -0.39 0.25 16 8 C 0.57 0.74 6.69 -12.45 -0.08 0.65 16 9 O -0.52 -2.25 15.76 5.28 0.08 -2.17 16 10 C -0.17 -0.13 5.58 -105.37 -0.59 -0.71 16 11 C 0.16 0.17 9.89 -16.35 -0.16 0.01 16 12 N -0.35 -0.68 2.93 -58.09 -0.17 -0.85 16 13 C -0.09 -0.07 6.24 -81.43 -0.51 -0.58 16 14 C -0.05 0.08 3.06 36.01 0.11 0.19 16 15 O -0.54 0.48 10.91 -35.23 -0.38 0.09 16 16 Si 0.97 -1.98 26.60 -169.99 -4.52 -6.50 16 17 H -0.24 0.52 6.84 56.52 0.39 0.91 16 18 H -0.24 0.20 7.11 56.52 0.40 0.60 16 19 H -0.25 0.24 7.11 56.52 0.40 0.64 16 20 C 0.04 0.07 10.44 -17.94 -0.19 -0.12 16 21 N -0.46 -1.96 11.30 -12.71 -0.14 -2.10 16 22 C 0.24 0.82 7.59 -155.92 -1.18 -0.37 16 23 C -0.07 -0.13 6.24 -39.34 -0.25 -0.37 16 24 Br 0.00 0.01 33.72 -68.01 -2.29 -2.29 16 25 C -0.10 0.00 6.89 -39.14 -0.27 -0.27 16 26 C 0.12 -0.16 5.78 -4.98 -0.03 -0.19 16 27 C -0.43 1.00 4.96 38.35 0.19 1.19 16 28 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 29 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 30 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 31 H 0.08 -0.29 4.91 -51.93 -0.26 -0.55 16 32 H 0.07 -0.29 7.96 -51.93 -0.41 -0.70 16 33 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 34 H 0.08 -0.26 7.97 -51.93 -0.41 -0.68 16 35 H 0.08 -0.35 7.97 -51.93 -0.41 -0.76 16 36 H 0.09 -0.30 6.70 -51.93 -0.35 -0.65 16 37 H 0.08 -0.15 7.39 -51.93 -0.38 -0.53 16 38 H 0.12 -0.52 2.84 -51.93 -0.15 -0.67 16 39 H 0.11 -0.32 4.46 -51.95 -0.23 -0.56 16 40 H 0.19 0.11 6.49 -52.49 -0.34 -0.23 16 41 H 0.13 -0.32 7.96 -51.93 -0.41 -0.74 16 42 H 0.38 -1.24 8.70 45.56 0.40 -0.85 16 43 H 0.19 -0.21 6.72 -52.49 -0.35 -0.56 16 44 H 0.21 -0.42 1.35 -63.52 -0.09 -0.51 16 45 H 0.10 0.04 6.69 -51.93 -0.35 -0.31 16 46 H 0.08 -0.23 6.56 -51.93 -0.34 -0.57 16 47 H 0.08 -0.09 7.96 -51.94 -0.41 -0.51 16 48 H 0.09 -0.25 7.96 -51.93 -0.41 -0.66 16 LS Contribution 380.69 15.07 5.74 5.74 Total: 0.00 -7.63 380.69 -10.46 -18.09 By element: Atomic # 1 Polarization: -4.86 SS G_CDS: -5.38 Total: -10.25 kcal Atomic # 6 Polarization: 6.97 SS G_CDS: -1.28 Total: 5.69 kcal Atomic # 7 Polarization: -1.99 SS G_CDS: -0.70 Total: -2.70 kcal Atomic # 8 Polarization: -1.78 SS G_CDS: -0.30 Total: -2.08 kcal Atomic # 14 Polarization: -5.97 SS G_CDS: -6.23 Total: -12.20 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -7.63 -10.46 -18.09 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.365 kcal (2) G-P(sol) polarization free energy of solvation -7.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.734 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.088 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds