Wall clock time and date at job start Thu Mar 4 2021 18:05:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86299 * 109.00588 * 2 1 4 4 C 1.86973 * 109.02164 * 241.16640 * 2 1 3 5 5 C 1.54218 * 109.28869 * 199.06442 * 4 2 1 6 6 C 1.52382 * 108.06412 * 321.63752 * 5 4 2 7 7 N 1.45481 * 105.89577 * 102.24071 * 6 5 4 8 8 C 1.34778 * 116.96395 * 80.91310 * 7 6 5 9 9 O 1.21594 * 119.99545 * 194.46876 * 8 7 6 10 10 C 1.47568 * 120.00200 * 14.47058 * 8 7 6 11 11 C 1.36500 * 120.00830 * 149.95699 * 10 8 7 12 12 N 1.35951 * 120.50390 * 179.76265 * 11 10 8 13 13 C 1.36995 * 132.41387 * 180.20598 * 12 11 10 14 14 C 1.50706 * 126.42627 * 0.25305 * 13 12 11 15 15 O 1.42898 * 109.47246 * 30.00675 * 14 13 12 16 16 Si 1.86303 * 109.46631 * 150.00062 * 14 13 12 17 17 H 1.48502 * 109.47433 * 60.00604 * 16 14 13 18 18 H 1.48509 * 109.46825 * 180.02562 * 16 14 13 19 19 H 1.48503 * 109.47469 * 299.99795 * 16 14 13 20 20 C 1.34999 * 107.14530 * 180.27814 * 13 12 11 21 21 N 1.33586 * 108.65600 * 359.97438 * 20 13 12 22 22 C 1.32412 * 109.21902 * 0.02562 * 21 20 13 23 23 C 1.41252 * 132.11312 * 180.02562 * 22 21 20 24 24 Br 1.89097 * 120.25627 * 359.95050 * 23 22 21 25 25 C 1.35706 * 119.48744 * 179.97438 * 23 22 21 26 26 C 1.42428 * 126.06699 * 260.88033 * 7 6 5 27 27 C 1.55259 * 107.47138 * 64.26936 * 26 7 6 28 28 H 1.09001 * 109.47016 * 301.09566 * 1 2 3 29 29 H 1.08997 * 109.46977 * 61.09231 * 1 2 3 30 30 H 1.09000 * 109.47172 * 181.09558 * 1 2 3 31 31 H 1.09000 * 109.47197 * 159.80435 * 3 2 1 32 32 H 1.09006 * 109.47235 * 279.80441 * 3 2 1 33 33 H 1.08996 * 109.47395 * 39.80605 * 3 2 1 34 34 H 1.09002 * 109.51558 * 319.09976 * 4 2 1 35 35 H 1.09002 * 109.51558 * 79.21445 * 4 2 1 36 36 H 1.08997 * 109.95809 * 201.87875 * 5 4 2 37 37 H 1.08994 * 109.55155 * 81.15951 * 5 4 2 38 38 H 1.08996 * 110.18042 * 343.10932 * 6 5 4 39 39 H 1.09000 * 110.17782 * 221.37137 * 6 5 4 40 40 H 1.08002 * 119.74685 * 359.97438 * 11 10 8 41 41 H 1.08997 * 109.47155 * 269.99832 * 14 13 12 42 42 H 0.96697 * 114.00030 * 59.99375 * 15 14 13 43 43 H 1.08001 * 125.67387 * 180.02562 * 20 13 12 44 44 H 1.08001 * 120.23458 * 180.02562 * 25 23 22 45 45 H 1.08997 * 109.86141 * 183.75334 * 26 7 6 46 46 H 1.08997 * 109.85984 * 304.70981 * 26 7 6 47 47 H 1.08989 * 109.51645 * 57.36555 * 27 26 7 48 48 H 1.09001 * 109.50994 * 177.52304 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4698 1.7614 0.0000 4 6 2.4724 -0.8525 -1.5485 5 6 3.9391 -1.2850 -1.3483 6 6 4.6520 -0.1897 -0.5646 7 7 4.7482 -0.6765 0.8030 8 6 5.7456 -1.5412 1.0751 9 8 5.7291 -2.1826 2.1080 10 6 6.8574 -1.7096 0.1196 11 6 8.1006 -2.0468 0.5713 12 7 9.1311 -2.2092 -0.3005 13 6 10.4481 -2.5420 -0.1228 14 6 11.1272 -2.8373 1.1898 15 8 10.1800 -3.3994 2.1003 16 14 12.5154 -4.0482 0.9119 17 1 13.4998 -3.4642 -0.0343 18 1 13.1843 -4.3398 2.2053 19 1 11.9686 -5.3064 0.3433 20 6 11.0235 -2.5550 -1.3439 21 7 10.0987 -2.2418 -2.2555 22 6 8.9422 -2.0273 -1.6473 23 6 7.6656 -1.6733 -2.1373 24 35 7.3933 -1.4198 -3.9913 25 6 6.6361 -1.5160 -1.2672 26 6 3.8870 -0.3237 1.8811 27 6 2.4671 -0.8469 1.5339 28 1 -0.3633 0.5308 0.8800 29 1 -0.3633 0.4968 -0.8996 30 1 -0.3633 -1.0275 0.0196 31 1 3.5000 1.7909 0.3548 32 1 2.4226 2.1620 -1.0127 33 1 1.8417 2.3621 0.6579 34 1 1.8570 -1.7298 -1.7474 35 1 2.4094 -0.1646 -2.3917 36 1 4.4227 -1.4196 -2.3158 37 1 3.9707 -2.2189 -0.7873 38 1 4.0723 0.7328 -0.5954 39 1 5.6477 -0.0212 -0.9747 40 1 8.2661 -2.1890 1.6291 41 1 11.5286 -1.9139 1.6071 42 1 9.7813 -4.2251 1.7931 43 1 12.0592 -2.7819 -1.5497 44 1 5.6549 -1.2459 -1.6287 45 1 4.2377 -0.7886 2.8025 46 1 3.8651 0.7597 1.9983 47 1 2.5069 -1.9228 1.3640 48 1 1.7882 -0.6327 2.3594 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:09 Heat of formation + Delta-G solvation = 69.654988 kcal Electronic energy + Delta-G solvation = -31999.418028 eV Core-core repulsion = 27842.917236 eV Total energy + Delta-G solvation = -4156.500791 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 425.068 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -44.31924 -42.19806 -38.71819 -38.30698 -38.03909 -35.40068 -34.36785 -32.91095 -31.90532 -30.99291 -30.27330 -29.17090 -28.69730 -27.48758 -26.52494 -25.89935 -24.13258 -23.42896 -22.84914 -22.49669 -20.63562 -19.62352 -18.80130 -18.21038 -17.85907 -17.50623 -17.30670 -16.54964 -16.39621 -16.11539 -15.89615 -15.77193 -15.38651 -15.14747 -15.00277 -14.75023 -14.60716 -14.51670 -13.89706 -13.83187 -13.74909 -13.56055 -13.36574 -13.18943 -13.05998 -12.99223 -12.83994 -12.71503 -12.62871 -12.42116 -12.12366 -12.07055 -11.99325 -11.83371 -11.53262 -11.37050 -11.31715 -11.07306 -10.85753 -10.74051 -10.45290 -10.44584 -10.08319 -9.71735 -9.05013 -0.89887 -0.37042 0.18979 0.85356 1.17292 1.28164 1.50613 1.56844 1.71438 1.84217 1.90978 1.94095 1.95766 1.99903 2.11191 2.68982 2.82029 2.93364 3.11025 3.29734 3.44332 3.47453 3.71323 3.82854 3.89114 4.03843 4.20575 4.22886 4.32857 4.34141 4.39086 4.43212 4.47124 4.59553 4.62514 4.70872 4.80989 4.83973 4.84577 4.87096 4.94908 4.95941 4.97970 5.21548 5.26027 5.41313 5.49484 5.56349 5.59291 5.62502 5.70299 6.02769 6.35403 6.48058 6.85973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.467 4.467 2 Si 1.063 2.937 3 C -0.472 4.472 4 C -0.415 4.415 5 C -0.150 4.150 6 C 0.029 3.971 7 N -0.583 5.583 8 C 0.566 3.434 9 O -0.557 6.557 10 C -0.169 4.169 11 C 0.155 3.845 12 N -0.356 5.356 13 C -0.085 4.085 14 C -0.051 4.051 15 O -0.552 6.552 16 Si 1.013 2.987 17 H -0.237 1.237 18 H -0.260 1.260 19 H -0.264 1.264 20 C 0.029 3.971 21 N -0.495 5.495 22 C 0.225 3.775 23 C -0.084 4.084 24 Br 0.006 6.994 25 C -0.083 4.083 26 C 0.112 3.888 27 C -0.444 4.444 28 H 0.067 0.933 29 H 0.071 0.929 30 H 0.063 0.937 31 H 0.080 0.920 32 H 0.083 0.917 33 H 0.074 0.926 34 H 0.079 0.921 35 H 0.097 0.903 36 H 0.096 0.904 37 H 0.070 0.930 38 H 0.142 0.858 39 H 0.113 0.887 40 H 0.194 0.806 41 H 0.139 0.861 42 H 0.389 0.611 43 H 0.211 0.789 44 H 0.226 0.774 45 H 0.081 0.919 46 H 0.098 0.902 47 H 0.067 0.933 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.352 3.160 -0.250 3.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.573 4.573 2 Si 1.254 2.746 3 C -0.578 4.578 4 C -0.500 4.500 5 C -0.187 4.187 6 C -0.092 4.092 7 N -0.314 5.314 8 C 0.353 3.647 9 O -0.436 6.436 10 C -0.177 4.177 11 C 0.029 3.971 12 N -0.029 5.029 13 C -0.197 4.197 14 C -0.161 4.161 15 O -0.358 6.358 16 Si 0.832 3.168 17 H -0.160 1.160 18 H -0.184 1.184 19 H -0.188 1.188 20 C -0.121 4.121 21 N -0.214 5.214 22 C -0.020 4.020 23 C -0.167 4.167 24 Br 0.091 6.909 25 C -0.107 4.107 26 C -0.010 4.010 27 C -0.528 4.528 28 H 0.086 0.914 29 H 0.090 0.910 30 H 0.082 0.918 31 H 0.098 0.902 32 H 0.102 0.898 33 H 0.093 0.907 34 H 0.098 0.902 35 H 0.115 0.885 36 H 0.113 0.887 37 H 0.088 0.912 38 H 0.159 0.841 39 H 0.130 0.870 40 H 0.210 0.790 41 H 0.157 0.843 42 H 0.238 0.762 43 H 0.227 0.773 44 H 0.241 0.759 45 H 0.099 0.901 46 H 0.116 0.884 47 H 0.086 0.914 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.453 2.905 -0.982 3.393 hybrid contribution -0.579 -0.480 1.056 1.297 sum -2.032 2.425 0.074 3.164 Atomic orbital electron populations 1.26344 1.22257 1.04146 1.04531 0.78422 0.65162 0.66097 0.64940 1.26721 1.06171 1.19195 1.05741 1.26642 0.98227 1.08518 1.16629 1.22198 0.97076 0.98455 1.01014 1.23381 1.04896 1.00850 0.80029 1.46734 1.29132 1.44222 1.11264 1.17931 0.82090 0.79946 0.84689 1.90827 1.78476 1.45851 1.28441 1.19341 0.93885 1.10031 0.94442 1.22195 0.85214 0.92518 0.97198 1.42683 1.08720 1.43610 1.07871 1.22453 0.82417 1.14411 1.00376 1.25064 0.98909 1.07491 0.84590 1.86482 1.59829 1.44147 1.45340 0.84831 0.75213 0.76378 0.80399 1.15962 1.18426 1.18791 1.22921 1.00828 1.01409 0.86904 1.70815 0.97910 1.20607 1.32057 1.20771 0.95680 1.05276 0.80290 1.20639 0.91542 1.10306 0.94175 1.96813 1.96018 1.95477 1.02552 1.23545 1.02844 0.93611 0.90710 1.21103 0.89088 1.01368 0.89441 1.27170 1.00198 1.07688 1.17737 0.91389 0.91007 0.91811 0.90180 0.89817 0.90665 0.90229 0.88461 0.88655 0.91165 0.84102 0.87006 0.78950 0.84330 0.76181 0.77275 0.75911 0.90069 0.88403 0.91439 0.89003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.47 2.47 8.65 113.37 0.98 3.45 16 2 Si 1.06 -9.35 10.05 68.60 0.69 -8.66 16 3 C -0.47 4.33 7.38 113.37 0.84 5.16 16 4 C -0.42 3.44 5.08 72.39 0.37 3.81 16 5 C -0.15 0.97 4.30 30.80 0.13 1.10 16 6 C 0.03 -0.19 4.92 86.37 0.42 0.24 16 7 N -0.58 1.14 2.19 -835.15 -1.83 -0.69 16 8 C 0.57 2.03 6.69 86.70 0.58 2.61 16 9 O -0.56 -5.83 15.76 -4.01 -0.06 -5.89 16 10 C -0.17 -0.38 5.58 -20.35 -0.11 -0.49 16 11 C 0.15 0.49 9.89 83.65 0.83 1.31 16 12 N -0.36 -1.65 2.93 -337.71 -0.99 -2.64 16 13 C -0.09 -0.17 6.24 41.01 0.26 0.08 16 14 C -0.05 0.15 3.06 71.24 0.22 0.37 16 15 O -0.55 0.75 10.91 -148.98 -1.63 -0.88 16 16 Si 1.01 -4.26 26.60 68.60 1.83 -2.43 16 17 H -0.24 1.24 6.84 99.48 0.68 1.92 16 18 H -0.26 0.40 7.11 99.48 0.71 1.11 16 19 H -0.26 0.42 7.11 99.48 0.71 1.12 16 20 C 0.03 0.11 10.44 83.68 0.87 0.98 16 21 N -0.49 -4.58 11.30 -194.11 -2.19 -6.78 16 22 C 0.23 1.69 7.59 134.19 1.02 2.71 16 23 C -0.08 -0.35 6.24 22.42 0.14 -0.21 16 24 Br 0.01 0.02 33.72 -20.37 -0.69 -0.67 16 25 C -0.08 -0.01 6.89 22.55 0.16 0.14 16 26 C 0.11 -0.27 5.78 87.90 0.51 0.24 16 27 C -0.44 1.90 4.96 72.76 0.36 2.26 16 28 H 0.07 -0.32 7.96 -2.39 -0.02 -0.34 16 29 H 0.07 -0.39 7.96 -2.39 -0.02 -0.41 16 30 H 0.06 -0.26 7.96 -2.39 -0.02 -0.28 16 31 H 0.08 -0.78 4.91 -2.39 -0.01 -0.79 16 32 H 0.08 -0.86 7.96 -2.38 -0.02 -0.88 16 33 H 0.07 -0.63 7.96 -2.39 -0.02 -0.65 16 34 H 0.08 -0.58 7.97 -2.39 -0.02 -0.60 16 35 H 0.10 -1.04 7.97 -2.39 -0.02 -1.06 16 36 H 0.10 -0.78 6.70 -2.39 -0.02 -0.80 16 37 H 0.07 -0.24 7.39 -2.39 -0.02 -0.26 16 38 H 0.14 -1.47 2.84 -2.39 -0.01 -1.47 16 39 H 0.11 -0.77 4.46 -2.41 -0.01 -0.78 16 40 H 0.19 0.45 6.49 -2.91 -0.02 0.43 16 41 H 0.14 -0.77 7.96 -2.39 -0.02 -0.79 16 42 H 0.39 -2.26 8.70 -74.06 -0.64 -2.90 16 43 H 0.21 -0.48 6.72 -2.91 -0.02 -0.50 16 44 H 0.23 -1.00 1.35 -13.27 -0.02 -1.01 16 45 H 0.08 0.19 6.69 -2.39 -0.02 0.18 16 46 H 0.10 -0.66 6.56 -2.39 -0.02 -0.68 16 47 H 0.07 -0.07 7.96 -2.39 -0.02 -0.09 16 48 H 0.09 -0.48 7.96 -2.39 -0.02 -0.50 16 Total: 0.00 -18.69 380.69 3.80 -14.89 By element: Atomic # 1 Polarization: -11.13 SS G_CDS: 1.11 Total: -10.02 kcal Atomic # 6 Polarization: 16.20 SS G_CDS: 7.57 Total: 23.77 kcal Atomic # 7 Polarization: -5.09 SS G_CDS: -5.02 Total: -10.11 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -1.69 Total: -6.77 kcal Atomic # 14 Polarization: -13.61 SS G_CDS: 2.51 Total: -11.09 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -18.69 3.80 -14.89 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.544 kcal (2) G-P(sol) polarization free energy of solvation -18.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.857 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.889 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds