Wall clock time and date at job start Thu Mar 4 2021 18:05:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86303 * 109.44264 * 2 1 4 4 C 1.88793 * 109.44149 * 119.92699 * 2 1 3 5 5 C 1.49869 * 108.19532 * 50.78122 * 4 2 1 6 6 C 1.54331 * 114.59189 * 84.44874 * 5 4 2 7 7 N 1.47115 * 117.93458 * 314.27228 * 6 5 4 8 8 C 1.34776 * 118.23303 * 134.71786 * 7 6 5 9 9 O 1.21700 * 120.00241 * 355.13167 * 8 7 6 10 10 C 1.46435 * 120.00297 * 175.12644 * 8 7 6 11 11 C 1.34806 * 120.00156 * 185.20108 * 10 8 7 12 12 C 1.47209 * 119.99782 * 180.02562 * 11 10 8 13 13 C 1.39834 * 120.16889 * 359.71733 * 12 11 10 14 14 C 1.37894 * 119.82356 * 179.78858 * 13 12 11 15 15 C 1.38401 * 120.17128 * 0.47023 * 14 13 12 16 16 C 1.50705 * 119.82911 * 179.76320 * 15 14 13 17 17 O 1.42899 * 109.46986 * 245.02461 * 16 15 14 18 18 Si 1.86303 * 109.46864 * 5.02078 * 16 15 14 19 19 H 1.48509 * 109.46969 * 60.00180 * 18 16 15 20 20 H 1.48499 * 109.46957 * 180.02562 * 18 16 15 21 21 H 1.48492 * 109.47233 * 300.00286 * 18 16 15 22 22 C 1.38407 * 120.34576 * 359.78671 * 15 14 13 23 23 C 1.37891 * 120.16807 * 359.97438 * 22 15 14 24 24 C 1.42771 * 123.53536 * 314.69402 * 7 6 5 25 25 C 1.54958 * 107.20703 * 96.96839 * 24 7 6 26 26 H 1.09000 * 109.47016 * 300.07925 * 1 2 3 27 27 H 1.09003 * 109.47040 * 60.07285 * 1 2 3 28 28 H 1.08994 * 109.47267 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47235 * 179.97438 * 3 2 1 30 30 H 1.08999 * 109.46905 * 299.92676 * 3 2 1 31 31 H 1.09001 * 109.47154 * 59.92481 * 3 2 1 32 32 H 1.09008 * 109.72802 * 170.47102 * 4 2 1 33 33 H 1.09003 * 109.72893 * 291.09296 * 4 2 1 34 34 H 1.09008 * 108.45750 * 205.85373 * 5 4 2 35 35 H 1.08998 * 108.45765 * 323.19249 * 5 4 2 36 36 H 1.08996 * 107.77298 * 192.10714 * 6 5 4 37 37 H 1.09003 * 107.69095 * 76.36612 * 6 5 4 38 38 H 1.08001 * 119.99549 * 5.19732 * 10 8 7 39 39 H 1.07994 * 119.99909 * 359.97438 * 11 10 8 40 40 H 1.08000 * 120.08964 * 0.02922 * 13 12 11 41 41 H 1.07998 * 119.91524 * 180.23665 * 14 13 12 42 42 H 1.08995 * 109.47065 * 125.02332 * 16 15 14 43 43 H 0.96696 * 113.99980 * 59.99635 * 17 16 15 44 44 H 1.07998 * 119.91617 * 179.97438 * 22 15 14 45 45 H 1.08002 * 120.08453 * 179.97438 * 23 22 15 46 46 H 1.08997 * 109.90691 * 337.54155 * 24 7 6 47 47 H 1.09003 * 109.97451 * 216.42834 * 24 7 6 48 48 H 1.09001 * 109.04408 * 163.35005 * 25 24 7 49 49 H 1.09004 * 109.04672 * 44.47043 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4831 1.7568 0.0000 4 6 2.4914 -0.8882 1.5429 5 6 1.7982 -2.2138 1.6347 6 6 2.4534 -3.3398 0.8073 7 7 2.8526 -3.0358 -0.5756 8 6 4.0677 -3.4434 -0.9927 9 8 4.8366 -3.9667 -0.2078 10 6 4.4628 -3.2568 -2.3903 11 6 5.6338 -3.7574 -2.8324 12 6 6.0312 -3.5692 -4.2373 13 6 5.1939 -2.8769 -5.1177 14 6 5.5752 -2.7010 -6.4312 15 6 6.7785 -3.2160 -6.8811 16 6 7.1851 -3.0238 -8.3195 17 8 7.2373 -4.2933 -8.9734 18 14 5.9400 -1.9346 -9.1765 19 1 5.8857 -0.6153 -8.4969 20 1 6.3403 -1.7458 -10.5940 21 1 4.6014 -2.5751 -9.1218 22 6 7.6101 -3.9070 -6.0171 23 6 7.2451 -4.0870 -4.6996 24 6 2.0221 -2.3328 -1.4999 25 6 2.4633 -0.8476 -1.4748 26 1 -0.3633 0.5151 0.8893 27 1 -0.3633 0.5127 -0.8907 28 1 -0.3633 -1.0276 0.0005 29 1 3.5731 1.7574 0.0005 30 1 2.1206 2.2700 -0.8906 31 1 2.1184 2.2708 0.8893 32 1 3.5681 -1.0405 1.4670 33 1 2.2656 -0.2929 2.4277 34 1 1.7767 -2.5202 2.6806 35 1 0.7702 -2.0900 1.2943 36 1 1.7571 -4.1777 0.7756 37 1 3.3421 -3.6714 1.3444 38 1 3.8159 -2.7181 -3.0670 39 1 6.2807 -4.2958 -2.1557 40 1 4.2530 -2.4776 -4.7690 41 1 4.9315 -2.1632 -7.1115 42 1 8.1676 -2.5537 -8.3596 43 1 6.3956 -4.7693 -8.9759 44 1 8.5473 -4.3063 -6.3757 45 1 7.8949 -4.6268 -4.0267 46 1 0.9781 -2.4151 -1.1977 47 1 2.1514 -2.7415 -2.5021 48 1 2.0706 -0.3449 -2.3586 49 1 3.5521 -0.7996 -1.4943 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:44 Heat of formation + Delta-G solvation = -62.942965 kcal Electronic energy + Delta-G solvation = -26371.203254 eV Core-core repulsion = 22807.848549 eV Total energy + Delta-G solvation = -3563.354705 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 333.167 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.26595 -40.59255 -37.90024 -37.48127 -35.27171 -34.40050 -32.28304 -31.40230 -31.21814 -29.13007 -28.54868 -27.90628 -26.63963 -24.64049 -24.21231 -23.72753 -22.26206 -20.93474 -19.46741 -19.02213 -18.27883 -17.37565 -17.01266 -16.74195 -16.56472 -16.27254 -15.78583 -15.40288 -15.25899 -15.08521 -14.89248 -14.79813 -14.59506 -14.43525 -14.15151 -14.08450 -13.84934 -13.58244 -13.55143 -13.35843 -13.26409 -13.19980 -13.07772 -12.92708 -12.66564 -12.34492 -12.30868 -12.23031 -12.09022 -11.71200 -11.61994 -11.34584 -10.91625 -10.87112 -10.68161 -10.48341 -10.32816 -10.05570 -9.62864 -9.26396 -0.57055 0.31258 0.89175 1.07723 1.35865 1.44866 1.70113 1.80935 1.81375 1.84696 2.04521 2.29271 2.59119 2.76981 3.36354 3.45524 3.56108 3.71445 3.80433 3.84363 3.97501 3.99963 4.11487 4.15017 4.24512 4.25390 4.33231 4.40485 4.45844 4.50795 4.59753 4.64847 4.68528 4.69272 4.70345 4.76929 4.79110 4.89299 4.90496 4.99909 5.04989 5.10021 5.16080 5.17936 5.32492 5.39720 5.41351 5.47097 5.51599 5.56543 5.69229 5.82478 6.41381 6.46864 7.24519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.022 2.978 3 C -0.451 4.451 4 C -0.402 4.402 5 C -0.115 4.115 6 C 0.103 3.897 7 N -0.596 5.596 8 C 0.545 3.455 9 O -0.542 6.542 10 C -0.215 4.215 11 C -0.018 4.018 12 C -0.071 4.071 13 C -0.096 4.096 14 C -0.127 4.127 15 C -0.109 4.109 16 C -0.083 4.083 17 O -0.537 6.537 18 Si 0.949 3.051 19 H -0.250 1.250 20 H -0.253 1.253 21 H -0.251 1.251 22 C -0.091 4.091 23 C -0.092 4.092 24 C 0.122 3.878 25 C -0.461 4.461 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.076 0.924 34 H 0.076 0.924 35 H 0.061 0.939 36 H 0.062 0.938 37 H 0.091 0.909 38 H 0.135 0.865 39 H 0.137 0.863 40 H 0.130 0.870 41 H 0.124 0.876 42 H 0.119 0.881 43 H 0.377 0.623 44 H 0.132 0.868 45 H 0.132 0.868 46 H 0.084 0.916 47 H 0.081 0.919 48 H 0.087 0.913 49 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.491 2.033 -1.742 4.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.216 2.784 3 C -0.559 4.559 4 C -0.488 4.488 5 C -0.153 4.153 6 C -0.019 4.019 7 N -0.328 5.328 8 C 0.337 3.663 9 O -0.421 6.421 10 C -0.236 4.236 11 C -0.038 4.038 12 C -0.071 4.071 13 C -0.113 4.113 14 C -0.145 4.145 15 C -0.109 4.109 16 C -0.194 4.194 17 O -0.342 6.342 18 Si 0.772 3.228 19 H -0.173 1.173 20 H -0.177 1.177 21 H -0.175 1.175 22 C -0.109 4.109 23 C -0.110 4.110 24 C -0.002 4.002 25 C -0.547 4.547 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.094 0.906 35 H 0.079 0.921 36 H 0.080 0.920 37 H 0.109 0.891 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.148 0.852 41 H 0.141 0.859 42 H 0.137 0.863 43 H 0.224 0.776 44 H 0.150 0.850 45 H 0.150 0.850 46 H 0.102 0.898 47 H 0.099 0.901 48 H 0.106 0.894 49 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -3.110 2.439 -1.821 4.352 hybrid contribution -0.340 -0.236 0.276 0.498 sum -3.450 2.202 -1.545 4.375 Atomic orbital electron populations 1.26228 1.20715 1.04290 1.04524 0.78710 0.66923 0.66378 0.66370 1.26135 1.06256 1.19063 1.04410 1.25670 1.05228 1.02711 1.15178 1.20991 0.99502 0.94572 1.00227 1.21679 1.01775 0.97041 0.81425 1.46928 1.16573 1.56997 1.12301 1.18415 0.81237 0.78183 0.88512 1.90810 1.51292 1.44017 1.56025 1.23066 0.99353 1.05751 0.95383 1.22430 0.94987 0.93280 0.93103 1.19067 0.95337 0.99693 0.93015 1.21326 0.99335 0.97771 0.92916 1.20995 0.96359 1.00776 0.96385 1.20488 0.94886 0.98868 0.96657 1.25026 1.10370 0.92766 0.91215 1.86532 1.38152 1.31432 1.78077 0.85680 0.77798 0.79034 0.80275 1.17328 1.17706 1.17530 1.20998 0.99761 0.97577 0.92607 1.21476 0.95434 0.98199 0.95939 1.20899 0.95220 0.90420 0.93646 1.26846 1.07433 1.02893 1.17568 0.91203 0.91200 0.91249 0.91334 0.91327 0.91211 0.90607 0.90507 0.90570 0.92071 0.91982 0.89094 0.84792 0.84508 0.85227 0.85870 0.86280 0.77599 0.84979 0.85005 0.89755 0.90061 0.89397 0.89811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.12 8.35 101.05 0.84 1.97 16 2 Si 1.02 -2.92 10.48 -169.99 -1.78 -4.70 16 3 C -0.45 0.64 8.65 101.05 0.87 1.52 16 4 C -0.40 0.46 4.83 35.60 0.17 0.63 16 5 C -0.11 0.15 5.32 -27.59 -0.15 0.00 16 6 C 0.10 0.03 5.98 -3.01 -0.02 0.01 16 7 N -0.60 -0.21 2.45 -175.61 -0.43 -0.64 16 8 C 0.55 1.48 7.14 -12.96 -0.09 1.38 16 9 O -0.54 -3.49 15.39 5.19 0.08 -3.41 16 10 C -0.22 -0.11 8.01 -37.50 -0.30 -0.41 16 11 C -0.02 -0.01 9.46 -37.16 -0.35 -0.37 16 12 C -0.07 -0.02 5.87 -105.06 -0.62 -0.64 16 13 C -0.10 0.05 9.41 -39.11 -0.37 -0.32 16 14 C -0.13 0.06 8.65 -39.65 -0.34 -0.28 16 15 C -0.11 0.03 5.36 -104.50 -0.56 -0.53 16 16 C -0.08 0.09 2.80 36.01 0.10 0.19 16 17 O -0.54 0.12 12.83 -35.23 -0.45 -0.33 16 18 Si 0.95 -1.16 25.12 -169.99 -4.27 -5.43 16 19 H -0.25 0.16 7.11 56.52 0.40 0.56 16 20 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 21 H -0.25 0.30 7.04 56.52 0.40 0.70 16 22 C -0.09 0.01 9.66 -39.65 -0.38 -0.38 16 23 C -0.09 0.00 9.80 -39.11 -0.38 -0.38 16 24 C 0.12 -0.27 5.15 -4.97 -0.03 -0.30 16 25 C -0.46 1.22 4.29 38.19 0.16 1.38 16 26 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 28 H 0.07 -0.19 6.53 -51.93 -0.34 -0.53 16 29 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 31 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 32 H 0.08 0.03 7.91 -51.92 -0.41 -0.38 16 33 H 0.08 -0.11 7.99 -51.93 -0.42 -0.53 16 34 H 0.08 -0.11 8.14 -51.92 -0.42 -0.53 16 35 H 0.06 -0.15 5.94 -51.93 -0.31 -0.46 16 36 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 37 H 0.09 0.22 6.69 -51.93 -0.35 -0.12 16 38 H 0.13 -0.25 4.11 -52.49 -0.22 -0.47 16 39 H 0.14 0.19 7.53 -52.49 -0.40 -0.21 16 40 H 0.13 -0.32 6.17 -52.49 -0.32 -0.64 16 41 H 0.12 -0.23 4.84 -52.49 -0.25 -0.48 16 42 H 0.12 -0.21 7.96 -51.93 -0.41 -0.63 16 43 H 0.38 -1.27 8.70 45.56 0.40 -0.87 16 44 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 45 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 46 H 0.08 -0.30 7.14 -51.93 -0.37 -0.67 16 47 H 0.08 -0.26 6.11 -51.93 -0.32 -0.58 16 48 H 0.09 -0.34 7.89 -51.93 -0.41 -0.75 16 49 H 0.08 -0.12 7.11 -51.93 -0.37 -0.49 16 LS Contribution 381.07 15.07 5.74 5.74 Total: 0.00 -6.71 381.07 -9.60 -16.31 By element: Atomic # 1 Polarization: -3.98 SS G_CDS: -7.05 Total: -11.03 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: -1.43 Total: 3.48 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -0.43 Total: -0.64 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.37 Total: -3.73 kcal Atomic # 14 Polarization: -4.08 SS G_CDS: -6.05 Total: -10.13 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -6.71 -9.60 -16.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.631 kcal (2) G-P(sol) polarization free energy of solvation -6.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.312 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds