Wall clock time and date at job start Thu Mar 4 2021 18:06:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35657 * 116.99389 * 2 1 4 4 C 1.38665 * 120.15764 * 0.25470 * 3 2 1 5 5 C 1.38092 * 120.08598 * 180.29672 * 4 3 2 6 6 C 1.38508 * 120.39349 * 359.72552 * 5 4 3 7 7 C 1.50700 * 119.85281 * 179.97438 * 6 5 4 8 8 O 1.42889 * 109.47098 * 245.02370 * 7 6 5 9 9 Si 1.86305 * 109.46914 * 5.02259 * 7 6 5 10 10 H 1.48499 * 109.47028 * 59.99889 * 9 7 6 11 11 H 1.48496 * 109.46792 * 179.97438 * 9 7 6 12 12 H 1.48502 * 109.47197 * 300.00051 * 9 7 6 13 13 C 1.37831 * 120.29718 * 359.97438 * 6 5 4 14 14 C 1.39674 * 119.90776 * 0.02562 * 13 6 5 15 15 C 1.47530 * 120.19203 * 180.02562 * 14 13 6 16 16 O 1.21589 * 120.00518 * 148.15441 * 15 14 13 17 17 N 1.34777 * 120.00029 * 328.43415 * 15 14 13 18 18 C 1.45487 * 116.96607 * 18.67276 * 17 15 14 19 19 C 1.52936 * 105.50554 * 81.14160 * 18 17 15 20 20 C 1.54088 * 108.12583 * 102.39754 * 19 18 17 21 21 Si 1.86970 * 109.19983 * 321.33617 * 20 19 18 22 22 C 1.86300 * 109.02304 * 199.18615 * 21 20 19 23 23 C 1.86294 * 108.96224 * 80.31991 * 21 20 19 24 24 C 1.85333 * 111.76835 * 319.77165 * 21 20 19 25 25 C 1.42427 * 116.96914 * 198.92824 * 17 15 14 26 26 H 1.09001 * 109.46753 * 299.99867 * 1 2 3 27 27 H 1.09000 * 109.47131 * 59.99976 * 1 2 3 28 28 H 1.08999 * 109.46906 * 179.97438 * 1 2 3 29 29 H 1.08003 * 119.95308 * 0.02562 * 4 3 2 30 30 H 1.08010 * 119.80439 * 179.70424 * 5 4 3 31 31 H 1.08998 * 109.46726 * 125.01895 * 7 6 5 32 32 H 0.96706 * 114.00585 * 60.00070 * 8 7 6 33 33 H 1.07998 * 120.04441 * 180.02562 * 13 6 5 34 34 H 1.08999 * 110.17751 * 200.04729 * 18 17 15 35 35 H 1.08997 * 110.17529 * 321.91263 * 18 17 15 36 36 H 1.08999 * 109.78035 * 342.70317 * 19 18 17 37 37 H 1.08998 * 109.70407 * 222.04857 * 19 18 17 38 38 H 1.08999 * 109.51733 * 201.41626 * 20 19 18 39 39 H 1.09004 * 109.55875 * 81.27911 * 20 19 18 40 40 H 1.09000 * 109.47214 * 182.26374 * 22 21 20 41 41 H 1.09004 * 109.46498 * 302.26367 * 22 21 20 42 42 H 1.08996 * 109.47302 * 62.25867 * 22 21 20 43 43 H 1.09001 * 109.47715 * 278.50903 * 23 21 20 44 44 H 1.09001 * 109.47122 * 38.51220 * 23 21 20 45 45 H 1.09003 * 109.47188 * 158.51085 * 23 21 20 46 46 H 1.08996 * 109.51664 * 324.76509 * 24 21 20 47 47 H 1.08995 * 109.51567 * 204.60748 * 24 21 20 48 48 H 1.09004 * 109.85684 * 3.72743 * 25 17 15 49 49 H 1.09009 * 109.85608 * 124.66571 * 25 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2927 2.3737 0.0053 5 6 1.9210 3.6034 -0.0009 6 6 3.3037 3.6838 -0.0067 7 6 3.9767 5.0322 -0.0140 8 8 4.6934 5.2002 -1.2387 9 14 2.6890 6.3697 0.1404 10 1 1.9440 6.1951 1.4131 11 1 3.3522 7.6983 0.1338 12 1 1.7443 6.2817 -1.0021 13 6 4.0670 2.5362 -0.0058 14 6 3.4445 1.2858 0.0004 15 6 4.2554 0.0533 0.0019 16 8 3.8442 -0.9444 0.5622 17 7 5.4546 0.0349 -0.6129 18 6 6.0757 1.3218 -0.8862 19 6 6.7365 1.7439 0.4269 20 6 8.2494 1.4763 0.3100 21 14 8.5207 -0.1259 -0.6148 22 6 10.2414 -0.7468 -0.2621 23 6 8.3539 0.1944 -2.4425 24 6 7.2960 -1.4240 -0.1149 25 6 5.9934 -1.2424 -0.9398 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 0.2140 2.3192 0.0099 30 1 1.3306 4.5079 -0.0015 31 1 4.6699 5.0967 0.8246 32 1 4.1381 5.1542 -2.0290 33 1 5.1448 2.6036 -0.0100 34 1 6.8272 1.2180 -1.6689 35 1 5.3197 2.0487 -1.1830 36 1 6.3226 1.1634 1.2514 37 1 6.5629 2.8058 0.6009 38 1 8.6838 1.3994 1.3067 39 1 8.7239 2.2944 -0.2320 40 1 10.4217 -1.6598 -0.8295 41 1 10.9681 0.0116 -0.5536 42 1 10.3413 -0.9552 0.8030 43 1 7.2986 0.2030 -2.7151 44 1 8.7996 1.1592 -2.6844 45 1 8.8660 -0.5918 -2.9973 46 1 7.0715 -1.3231 0.9469 47 1 7.7139 -2.4121 -0.3071 48 1 5.2786 -2.0232 -0.6798 49 1 6.2192 -1.2873 -2.0052 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:06:08 Heat of formation + Delta-G solvation = -42.382233 kcal Electronic energy + Delta-G solvation = -29323.560826 eV Core-core repulsion = 25570.641650 eV Total energy + Delta-G solvation = -3752.919176 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.41323 -40.65829 -39.30299 -37.89869 -37.08943 -34.53860 -32.97796 -31.86357 -30.86573 -29.17677 -28.71307 -28.60170 -27.09267 -26.08892 -25.39255 -23.53092 -22.93782 -22.16782 -20.56169 -19.08187 -18.51775 -18.32615 -17.43936 -17.22714 -16.77944 -16.43551 -16.14433 -16.07903 -15.91857 -15.41436 -15.08421 -14.98303 -14.68519 -14.59088 -14.47307 -14.01925 -13.80858 -13.72687 -13.62734 -13.52515 -13.33335 -13.16920 -12.93622 -12.77125 -12.68820 -12.49727 -12.34887 -12.20663 -12.14795 -12.04038 -11.87950 -11.71894 -11.46989 -10.89843 -10.74554 -10.48754 -10.42679 -10.33263 -10.04243 -9.61839 -9.24569 -0.23463 0.19028 1.22769 1.49217 1.56760 1.61713 1.87724 1.91638 1.96940 1.97313 2.09228 2.21993 2.55754 2.69100 3.32860 3.55659 3.64478 3.76751 3.88018 3.89431 4.00671 4.10196 4.22447 4.26667 4.29817 4.34669 4.37893 4.39855 4.56715 4.64446 4.65944 4.68868 4.73453 4.77471 4.81421 4.82727 4.84444 4.91943 4.92852 4.95403 5.03263 5.08070 5.26062 5.28438 5.39020 5.49077 5.56629 5.60357 5.67863 5.76525 6.17961 6.32658 6.79232 7.11342 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.323 6.323 3 C 0.165 3.835 4 C -0.213 4.213 5 C -0.060 4.060 6 C -0.166 4.166 7 C -0.069 4.069 8 O -0.546 6.546 9 Si 0.973 3.027 10 H -0.261 1.261 11 H -0.274 1.274 12 H -0.248 1.248 13 C -0.066 4.066 14 C -0.194 4.194 15 C 0.550 3.450 16 O -0.566 6.566 17 N -0.595 5.595 18 C 0.028 3.972 19 C -0.139 4.139 20 C -0.413 4.413 21 Si 1.060 2.940 22 C -0.463 4.463 23 C -0.467 4.467 24 C -0.446 4.446 25 C 0.117 3.883 26 H 0.070 0.930 27 H 0.074 0.926 28 H 0.109 0.891 29 H 0.158 0.842 30 H 0.145 0.855 31 H 0.130 0.870 32 H 0.390 0.610 33 H 0.200 0.800 34 H 0.134 0.866 35 H 0.126 0.874 36 H 0.056 0.944 37 H 0.095 0.905 38 H 0.075 0.925 39 H 0.097 0.903 40 H 0.067 0.933 41 H 0.074 0.926 42 H 0.062 0.938 43 H 0.077 0.923 44 H 0.085 0.915 45 H 0.074 0.926 46 H 0.059 0.941 47 H 0.087 0.913 48 H 0.067 0.933 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.378 5.386 -3.470 6.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.235 6.235 3 C 0.117 3.883 4 C -0.231 4.231 5 C -0.078 4.078 6 C -0.167 4.167 7 C -0.180 4.180 8 O -0.353 6.353 9 Si 0.798 3.202 10 H -0.186 1.186 11 H -0.199 1.199 12 H -0.172 1.172 13 C -0.083 4.083 14 C -0.198 4.198 15 C 0.341 3.659 16 O -0.445 6.445 17 N -0.327 5.327 18 C -0.092 4.092 19 C -0.177 4.177 20 C -0.499 4.499 21 Si 1.251 2.749 22 C -0.570 4.570 23 C -0.574 4.574 24 C -0.529 4.529 25 C -0.006 4.006 26 H 0.088 0.912 27 H 0.093 0.907 28 H 0.127 0.873 29 H 0.175 0.825 30 H 0.162 0.838 31 H 0.148 0.852 32 H 0.239 0.761 33 H 0.216 0.784 34 H 0.151 0.849 35 H 0.143 0.857 36 H 0.075 0.925 37 H 0.113 0.887 38 H 0.094 0.906 39 H 0.116 0.884 40 H 0.087 0.913 41 H 0.093 0.907 42 H 0.081 0.919 43 H 0.096 0.904 44 H 0.104 0.896 45 H 0.093 0.907 46 H 0.078 0.922 47 H 0.106 0.894 48 H 0.085 0.915 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.131 5.302 -2.700 5.951 hybrid contribution -0.720 -0.909 0.019 1.160 sum -0.589 4.393 -2.681 5.180 Atomic orbital electron populations 1.23421 0.76303 1.05505 1.02770 1.86230 1.23485 1.26778 1.87047 1.19333 0.91257 0.85363 0.92329 1.21391 1.01509 0.91068 1.09167 1.21319 0.94438 0.97767 0.94266 1.20373 0.93416 0.96626 1.06264 1.24880 1.04463 0.97421 0.91279 1.86489 1.38376 1.95007 1.15394 0.85357 0.76853 0.76969 0.81065 1.18575 1.19927 1.17151 1.22929 1.04219 0.88914 0.92266 1.19446 0.91100 0.94626 1.14581 1.18598 0.81764 0.87484 0.78098 1.90763 1.72645 1.37454 1.43665 1.46773 1.19132 1.07593 1.59172 1.23577 1.00973 0.84641 1.00040 1.22154 0.96426 1.02571 0.96556 1.26570 0.96992 1.17020 1.09297 0.78466 0.64340 0.65269 0.66851 1.26296 1.19456 1.06481 1.04723 1.26672 1.04786 1.06214 1.19727 1.27251 1.07463 1.14663 1.03554 1.20939 0.95550 0.84277 0.99808 0.91190 0.90709 0.87274 0.82460 0.83808 0.85202 0.76106 0.78365 0.84875 0.85702 0.92515 0.88668 0.90621 0.88436 0.91347 0.90690 0.91859 0.90416 0.89596 0.90690 0.92174 0.89446 0.91494 0.88899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.81 113.37 1.11 1.11 16 2 O -0.32 -3.30 9.05 -71.89 -0.65 -3.95 16 3 C 0.17 1.24 6.67 22.84 0.15 1.39 16 4 C -0.21 -0.25 9.03 22.34 0.20 -0.05 16 5 C -0.06 0.09 8.65 22.30 0.19 0.28 16 6 C -0.17 0.28 5.35 -19.90 -0.11 0.17 16 7 C -0.07 0.36 2.79 71.24 0.20 0.55 16 8 O -0.55 2.94 12.83 -148.98 -1.91 1.02 16 9 Si 0.97 -4.25 25.12 68.60 1.72 -2.53 16 10 H -0.26 0.64 7.11 99.48 0.71 1.35 16 11 H -0.27 0.15 7.11 99.48 0.71 0.86 16 12 H -0.25 1.24 7.04 99.48 0.70 1.94 16 13 C -0.07 -0.06 6.96 22.52 0.16 0.09 16 14 C -0.19 -1.45 5.66 -20.01 -0.11 -1.57 16 15 C 0.55 6.32 6.49 86.69 0.56 6.88 16 16 O -0.57 -11.51 15.03 13.84 0.21 -11.30 16 17 N -0.60 -2.58 2.18 -833.72 -1.82 -4.40 16 18 C 0.03 -0.06 4.94 86.55 0.43 0.37 16 19 C -0.14 0.35 4.52 30.94 0.14 0.49 16 20 C -0.41 1.94 5.09 72.35 0.37 2.31 16 21 Si 1.06 -5.26 10.05 68.60 0.69 -4.57 16 22 C -0.46 1.24 8.65 113.37 0.98 2.22 16 23 C -0.47 2.78 7.38 113.37 0.84 3.61 16 24 C -0.45 -0.57 4.96 72.76 0.36 -0.21 16 25 C 0.12 0.48 5.76 87.90 0.51 0.99 16 26 H 0.07 -0.18 7.65 -2.39 -0.02 -0.19 16 27 H 0.07 -0.28 7.67 -2.39 -0.02 -0.30 16 28 H 0.11 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.16 -0.59 6.30 -2.91 -0.02 -0.61 16 30 H 0.14 -0.79 4.83 -2.91 -0.01 -0.80 16 31 H 0.13 -0.93 7.96 -2.39 -0.02 -0.95 16 32 H 0.39 -4.41 8.70 -74.05 -0.64 -5.05 16 33 H 0.20 -0.52 1.73 -2.99 -0.01 -0.52 16 34 H 0.13 -0.83 2.84 -2.39 -0.01 -0.83 16 35 H 0.13 -0.43 4.18 -3.70 -0.02 -0.45 16 36 H 0.06 0.13 7.39 -2.39 -0.02 0.11 16 37 H 0.10 -0.52 6.90 -2.39 -0.02 -0.54 16 38 H 0.07 -0.29 7.97 -2.39 -0.02 -0.31 16 39 H 0.10 -0.74 7.97 -2.39 -0.02 -0.76 16 40 H 0.07 -0.16 7.96 -2.39 -0.02 -0.18 16 41 H 0.07 -0.26 7.96 -2.39 -0.02 -0.28 16 42 H 0.06 -0.09 7.96 -2.39 -0.02 -0.11 16 43 H 0.08 -0.45 4.91 -2.39 -0.01 -0.46 16 44 H 0.09 -0.66 7.96 -2.39 -0.02 -0.68 16 45 H 0.07 -0.42 7.96 -2.39 -0.02 -0.43 16 46 H 0.06 0.32 7.96 -2.39 -0.02 0.30 16 47 H 0.09 0.00 7.96 -2.39 -0.02 -0.02 16 48 H 0.07 0.68 6.78 -2.39 -0.02 0.67 16 49 H 0.09 -0.07 6.56 -2.38 -0.02 -0.09 16 Total: 0.00 -20.92 362.43 5.31 -15.61 By element: Atomic # 1 Polarization: -9.62 SS G_CDS: 1.09 Total: -8.53 kcal Atomic # 6 Polarization: 12.67 SS G_CDS: 5.98 Total: 18.65 kcal Atomic # 7 Polarization: -2.58 SS G_CDS: -1.82 Total: -4.40 kcal Atomic # 8 Polarization: -11.87 SS G_CDS: -2.35 Total: -14.22 kcal Atomic # 14 Polarization: -9.51 SS G_CDS: 2.41 Total: -7.10 kcal Total: -20.92 5.31 -15.61 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.774 kcal (2) G-P(sol) polarization free energy of solvation -20.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.609 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds