Wall clock time and date at job start Thu Mar 4 2021 18:15:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86298 * 109.00290 * 2 1 4 4 C 1.86978 * 109.01858 * 241.16999 * 2 1 3 5 5 C 1.54095 * 109.19683 * 199.18126 * 4 2 1 6 6 C 1.52938 * 108.12289 * 321.33473 * 5 4 2 7 7 N 1.45483 * 105.50249 * 102.39910 * 6 5 4 8 8 C 1.34778 * 116.96985 * 81.13506 * 7 6 5 9 9 O 1.21638 * 120.00376 * 184.78371 * 8 7 6 10 10 C 1.47067 * 119.99506 * 4.78621 * 8 7 6 11 11 C 1.35866 * 125.42123 * 164.94460 * 10 8 7 12 12 C 1.41590 * 107.72144 * 179.97438 * 11 10 8 13 13 C 1.40067 * 133.37620 * 180.02562 * 12 11 10 14 14 C 1.36475 * 119.82868 * 179.97438 * 13 12 11 15 15 C 1.38900 * 120.61368 * 0.25839 * 14 13 12 16 16 C 1.50703 * 119.67224 * 179.74471 * 15 14 13 17 17 O 1.42902 * 109.46735 * 244.99647 * 16 15 14 18 18 Si 1.86292 * 109.47355 * 4.99864 * 16 15 14 19 19 H 1.48500 * 109.47261 * 60.00042 * 18 16 15 20 20 H 1.48501 * 109.47194 * 180.02562 * 18 16 15 21 21 H 1.48505 * 109.47048 * 299.99902 * 18 16 15 22 22 C 1.37714 * 120.65030 * 359.49700 * 15 14 13 23 23 C 1.39183 * 119.80490 * 0.47591 * 22 15 14 24 24 N 1.37492 * 133.18575 * 179.74998 * 23 22 15 25 25 C 1.42436 * 126.06704 * 260.85419 * 7 6 5 26 26 C 1.55250 * 107.47507 * 64.51491 * 25 7 6 27 27 H 1.09002 * 109.47035 * 301.08999 * 1 2 3 28 28 H 1.08997 * 109.47150 * 61.09839 * 1 2 3 29 29 H 1.09002 * 109.46853 * 181.09178 * 1 2 3 30 30 H 1.09006 * 109.46562 * 159.48578 * 3 2 1 31 31 H 1.09000 * 109.47417 * 279.48527 * 3 2 1 32 32 H 1.08996 * 109.47371 * 39.49148 * 3 2 1 33 33 H 1.08999 * 109.51909 * 319.10152 * 4 2 1 34 34 H 1.09004 * 109.51361 * 79.21226 * 4 2 1 35 35 H 1.08994 * 109.73630 * 81.05341 * 5 4 2 36 36 H 1.08993 * 109.73578 * 201.70442 * 5 4 2 37 37 H 1.08993 * 110.18148 * 343.49633 * 6 5 4 38 38 H 1.08994 * 110.45272 * 221.43849 * 6 5 4 39 39 H 1.07997 * 126.13814 * 359.97389 * 11 10 8 40 40 H 1.07995 * 120.08517 * 0.02562 * 13 12 11 41 41 H 1.07998 * 119.69382 * 179.97438 * 14 13 12 42 42 H 1.08999 * 109.47189 * 124.99903 * 16 15 14 43 43 H 0.96690 * 114.00119 * 60.00480 * 17 16 15 44 44 H 1.08002 * 120.09606 * 180.26029 * 22 15 14 45 45 H 0.96996 * 125.60160 * 0.03857 * 24 23 22 46 46 H 1.08992 * 109.85807 * 184.01098 * 25 7 6 47 47 H 1.08998 * 109.85311 * 304.95919 * 25 7 6 48 48 H 1.08999 * 109.51232 * 57.37308 * 26 25 7 49 49 H 1.08998 * 109.51352 * 177.52533 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4697 1.7615 0.0000 4 6 2.4724 -0.8524 -1.5486 5 6 3.9369 -1.2863 -1.3453 6 6 4.6551 -0.1854 -0.5635 7 7 4.7483 -0.6763 0.8028 8 6 5.7456 -1.5410 1.0750 9 8 5.8232 -2.0532 2.1755 10 6 6.7401 -1.8652 0.0412 11 6 7.9334 -2.4767 0.2607 12 6 8.5884 -2.6044 -0.9881 13 6 9.8214 -3.1433 -1.3769 14 6 10.1875 -3.1214 -2.6915 15 6 9.3505 -2.5641 -3.6497 16 6 9.7785 -2.5461 -5.0945 17 8 9.9556 -1.1940 -5.5219 18 14 11.3853 -3.4709 -5.2779 19 1 11.2012 -4.8759 -4.8337 20 1 11.8074 -3.4525 -6.7015 21 1 12.4284 -2.8208 -4.4444 22 6 8.1312 -2.0325 -3.2931 23 6 7.7352 -2.0435 -1.9588 24 7 6.6099 -1.5965 -1.3075 25 6 3.8869 -0.3238 1.8811 26 6 2.4671 -0.8469 1.5338 27 1 -0.3633 0.5307 0.8801 28 1 -0.3633 0.4967 -0.8996 29 1 -0.3633 -1.0275 0.0196 30 1 3.4981 1.7915 0.3602 31 1 2.4279 2.1602 -1.0136 32 1 1.8382 2.3632 0.6535 33 1 1.8569 -1.7297 -1.7476 34 1 2.4092 -0.1644 -2.3918 35 1 3.9697 -2.2194 -0.7830 36 1 4.4181 -1.4231 -2.3137 37 1 4.0746 0.7366 -0.5930 38 1 5.6518 -0.0169 -0.9712 39 1 8.3139 -2.8063 1.2162 40 1 10.4803 -3.5757 -0.6386 41 1 11.1389 -3.5371 -2.9888 42 1 9.0129 -3.0232 -5.7063 43 1 10.6238 -0.7073 -5.0204 44 1 7.4856 -1.6052 -4.0461 45 1 5.8493 -1.1643 -1.7264 46 1 4.2377 -0.7886 2.8024 47 1 3.8649 0.7597 1.9983 48 1 2.5070 -1.9229 1.3639 49 1 1.7882 -0.6329 2.3592 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_13158378.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:15:26 Heat of formation + Delta-G solvation = 12.135290 kcal Electronic energy + Delta-G solvation = -29118.234395 eV Core-core repulsion = 25364.483276 eV Total energy + Delta-G solvation = -3753.751119 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 346.163 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.11054 -41.19265 -39.01081 -38.22210 -36.91065 -34.54476 -33.18938 -32.13743 -30.64851 -30.42511 -29.52050 -28.97302 -27.19818 -26.91098 -24.89994 -23.73406 -23.03090 -22.26836 -21.81900 -20.81390 -18.79001 -18.69458 -18.14256 -17.36921 -16.98704 -16.64994 -16.26680 -16.04859 -15.68720 -15.55486 -15.30127 -15.16956 -14.94785 -14.85800 -14.73145 -14.52622 -14.31452 -14.17605 -13.95627 -13.79660 -13.72402 -13.42964 -13.19030 -13.17961 -12.96367 -12.84292 -12.55099 -12.52022 -12.27985 -12.16230 -12.08788 -11.97274 -11.49367 -11.19184 -11.05381 -10.88768 -10.78583 -10.64081 -10.43754 -9.83044 -9.26814 -8.76201 -0.29202 0.55645 1.02444 1.16340 1.45893 1.53753 1.54978 1.58863 1.62064 1.77889 1.91239 1.98597 2.25757 2.39504 2.81187 3.20614 3.38033 3.45132 3.55766 3.66824 3.73386 3.89924 4.01645 4.06512 4.10167 4.19394 4.26044 4.29446 4.34123 4.44122 4.46520 4.49011 4.51618 4.57056 4.58423 4.60343 4.61796 4.67348 4.84172 4.88969 4.93581 5.00226 5.06748 5.23106 5.32201 5.34033 5.38183 5.43847 5.51105 5.57801 5.66284 5.98967 6.08768 6.30914 6.53573 6.98908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.007 2.993 3 C -0.464 4.464 4 C -0.410 4.410 5 C -0.143 4.143 6 C 0.037 3.963 7 N -0.598 5.598 8 C 0.574 3.426 9 O -0.515 6.515 10 C 0.015 3.985 11 C -0.104 4.104 12 C -0.115 4.115 13 C -0.051 4.051 14 C -0.155 4.155 15 C -0.090 4.090 16 C -0.080 4.080 17 O -0.539 6.539 18 Si 0.954 3.046 19 H -0.249 1.249 20 H -0.256 1.256 21 H -0.251 1.251 22 C -0.100 4.100 23 C 0.105 3.895 24 N -0.588 5.588 25 C 0.116 3.884 26 C -0.432 4.432 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.075 0.925 31 H 0.073 0.927 32 H 0.075 0.925 33 H 0.080 0.920 34 H 0.081 0.919 35 H 0.082 0.918 36 H 0.071 0.929 37 H 0.126 0.874 38 H 0.099 0.901 39 H 0.157 0.843 40 H 0.130 0.870 41 H 0.122 0.878 42 H 0.118 0.882 43 H 0.377 0.623 44 H 0.127 0.873 45 H 0.428 0.572 46 H 0.106 0.894 47 H 0.075 0.925 48 H 0.081 0.919 49 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.760 2.493 -2.282 3.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.201 2.799 3 C -0.570 4.570 4 C -0.495 4.495 5 C -0.181 4.181 6 C -0.086 4.086 7 N -0.330 5.330 8 C 0.363 3.637 9 O -0.390 6.390 10 C -0.094 4.094 11 C -0.130 4.130 12 C -0.120 4.120 13 C -0.069 4.069 14 C -0.174 4.174 15 C -0.092 4.092 16 C -0.191 4.191 17 O -0.344 6.344 18 Si 0.777 3.223 19 H -0.173 1.173 20 H -0.181 1.181 21 H -0.175 1.175 22 C -0.121 4.121 23 C -0.005 4.005 24 N -0.206 5.206 25 C -0.006 4.006 26 C -0.518 4.518 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.094 0.906 31 H 0.092 0.908 32 H 0.095 0.905 33 H 0.099 0.901 34 H 0.100 0.900 35 H 0.101 0.899 36 H 0.089 0.911 37 H 0.144 0.856 38 H 0.116 0.884 39 H 0.174 0.826 40 H 0.148 0.852 41 H 0.140 0.860 42 H 0.135 0.865 43 H 0.224 0.776 44 H 0.145 0.855 45 H 0.281 0.719 46 H 0.124 0.876 47 H 0.093 0.907 48 H 0.099 0.901 49 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -1.637 1.710 -2.213 3.240 hybrid contribution -0.498 0.547 0.158 0.757 sum -2.135 2.257 -2.055 3.725 Atomic orbital electron populations 1.26122 1.20402 1.04577 1.04615 0.79268 0.67207 0.66769 0.66617 1.26665 1.05977 1.19352 1.05049 1.26532 0.98926 1.08176 1.15886 1.22275 0.96775 0.99005 1.00057 1.22992 1.03524 1.00378 0.81680 1.46779 1.30530 1.45336 1.10368 1.17528 0.80355 0.79351 0.86506 1.90852 1.73912 1.51476 1.22749 1.20060 0.98377 1.07842 0.83139 1.20954 0.92958 1.01089 0.98047 1.18242 0.96112 1.04741 0.92894 1.20357 0.94084 0.96707 0.95790 1.20519 1.00118 1.03496 0.93252 1.19975 0.94323 0.99202 0.95715 1.24996 1.11276 0.89872 0.92931 1.86512 1.63570 1.23141 1.61191 0.85612 0.76128 0.79786 0.80770 1.17310 1.18063 1.17484 1.19845 0.97073 1.03176 0.92011 1.18473 0.88343 0.99793 0.93870 1.43892 1.18375 1.52314 1.06052 1.20995 0.88590 1.00368 0.90693 1.26952 1.00773 1.08182 1.15937 0.91064 0.91142 0.91192 0.90610 0.90766 0.90543 0.90070 0.89972 0.89912 0.91086 0.85615 0.88386 0.82580 0.85221 0.86002 0.86451 0.77578 0.85489 0.71881 0.87564 0.90656 0.90059 0.89257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.06 8.65 101.05 0.87 1.93 16 2 Si 1.01 -3.81 10.05 -169.99 -1.71 -5.51 16 3 C -0.46 1.62 7.38 101.05 0.75 2.37 16 4 C -0.41 1.37 5.09 37.73 0.19 1.56 16 5 C -0.14 0.37 4.41 -26.19 -0.12 0.26 16 6 C 0.04 -0.09 4.96 -4.62 -0.02 -0.12 16 7 N -0.60 0.16 2.18 -177.61 -0.39 -0.23 16 8 C 0.57 1.55 6.94 -12.68 -0.09 1.46 16 9 O -0.51 -3.06 15.89 5.24 0.08 -2.98 16 10 C 0.01 0.03 6.38 -82.29 -0.53 -0.49 16 11 C -0.10 -0.26 10.57 -39.15 -0.41 -0.68 16 12 C -0.12 -0.25 6.16 -106.93 -0.66 -0.91 16 13 C -0.05 -0.05 10.06 -39.53 -0.40 -0.45 16 14 C -0.16 -0.07 8.59 -39.97 -0.34 -0.42 16 15 C -0.09 -0.03 5.35 -104.57 -0.56 -0.59 16 16 C -0.08 0.06 2.79 36.01 0.10 0.16 16 17 O -0.54 0.11 12.83 -35.23 -0.45 -0.35 16 18 Si 0.95 -0.77 25.11 -169.99 -4.27 -5.04 16 19 H -0.25 0.02 7.11 56.52 0.40 0.42 16 20 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 21 H -0.25 0.17 7.03 56.52 0.40 0.57 16 22 C -0.10 -0.06 9.69 -39.42 -0.38 -0.44 16 23 C 0.11 0.15 7.25 -83.97 -0.61 -0.45 16 24 N -0.59 -0.16 4.57 -7.35 -0.03 -0.19 16 25 C 0.12 -0.08 5.82 -4.98 -0.03 -0.10 16 26 C -0.43 0.82 4.96 38.35 0.19 1.01 16 27 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 28 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 29 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 30 H 0.08 -0.27 4.91 -51.93 -0.25 -0.52 16 31 H 0.07 -0.28 7.96 -51.93 -0.41 -0.70 16 32 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 33 H 0.08 -0.24 7.97 -51.93 -0.41 -0.65 16 34 H 0.08 -0.34 7.97 -51.93 -0.41 -0.75 16 35 H 0.08 -0.08 7.39 -51.93 -0.38 -0.46 16 36 H 0.07 -0.25 6.71 -51.93 -0.35 -0.60 16 37 H 0.13 -0.51 2.84 -51.93 -0.15 -0.66 16 38 H 0.10 -0.26 4.88 -51.93 -0.25 -0.52 16 39 H 0.16 0.29 8.06 -52.49 -0.42 -0.14 16 40 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 41 H 0.12 -0.11 4.80 -52.49 -0.25 -0.36 16 42 H 0.12 -0.19 7.96 -51.93 -0.41 -0.61 16 43 H 0.38 -1.21 8.70 45.56 0.40 -0.82 16 44 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 45 H 0.43 -0.82 2.70 -40.82 -0.11 -0.93 16 46 H 0.11 0.14 6.57 -51.93 -0.34 -0.20 16 47 H 0.08 -0.18 6.55 -51.93 -0.34 -0.52 16 48 H 0.08 -0.05 7.96 -51.93 -0.41 -0.47 16 49 H 0.09 -0.22 7.96 -51.93 -0.41 -0.63 16 LS Contribution 366.79 15.07 5.53 5.53 Total: 0.00 -6.88 366.79 -9.52 -16.40 By element: Atomic # 1 Polarization: -5.49 SS G_CDS: -6.24 Total: -11.73 kcal Atomic # 6 Polarization: 6.14 SS G_CDS: -2.04 Total: 4.10 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -0.42 Total: -0.42 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.37 Total: -3.32 kcal Atomic # 14 Polarization: -4.57 SS G_CDS: -5.98 Total: -10.55 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -6.88 -9.52 -16.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13158378.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.533 kcal (2) G-P(sol) polarization free energy of solvation -6.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.656 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.398 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.135 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds