Wall clock time and date at job start Thu Mar 4 2021 18:16:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86296 * 1 3 3 C 1.86300 * 109.44170 * 2 1 4 4 C 1.88807 * 109.43877 * 119.92352 * 2 1 3 5 5 C 1.49871 * 108.19174 * 50.78334 * 4 2 1 6 6 C 1.54272 * 114.56366 * 84.46190 * 5 4 2 7 7 N 1.47116 * 117.97388 * 314.21997 * 6 5 4 8 8 C 1.34769 * 118.23627 * 134.74247 * 7 6 5 9 9 O 1.21584 * 120.00678 * 176.35996 * 8 7 6 10 10 C 1.47652 * 120.00076 * 356.36413 * 8 7 6 11 11 C 1.40176 * 119.97263 * 231.97467 * 10 8 7 12 12 C 1.36355 * 120.66314 * 179.79288 * 11 10 8 13 13 C 1.39327 * 120.24001 * 0.43966 * 12 11 10 14 14 N 1.37398 * 133.25159 * 179.79316 * 13 12 11 15 15 C 1.36865 * 109.98179 * 180.02562 * 14 13 12 16 16 C 1.34181 * 109.96711 * 359.97438 * 15 14 13 17 17 C 1.50702 * 126.54153 * 180.02562 * 16 15 14 18 18 O 1.42901 * 109.47240 * 105.00225 * 17 16 15 19 19 Si 1.86296 * 109.46885 * 344.99901 * 17 16 15 20 20 H 1.48501 * 109.47268 * 60.00322 * 19 17 16 21 21 H 1.48502 * 109.47228 * 179.97438 * 19 17 16 22 22 H 1.48493 * 109.47329 * 299.99902 * 19 17 16 23 23 C 1.40909 * 119.64310 * 359.81812 * 13 12 11 24 24 C 1.39190 * 119.97386 * 52.24492 * 10 8 7 25 25 C 1.42781 * 123.53473 * 314.76246 * 7 6 5 26 26 C 1.54956 * 107.20579 * 96.92482 * 25 7 6 27 27 H 1.08998 * 109.47556 * 300.07354 * 1 2 3 28 28 H 1.09004 * 109.46939 * 60.07827 * 1 2 3 29 29 H 1.09007 * 109.47083 * 180.02562 * 1 2 3 30 30 H 1.08999 * 109.47424 * 179.91799 * 3 2 1 31 31 H 1.09000 * 109.46793 * 299.92550 * 3 2 1 32 32 H 1.09002 * 109.46680 * 59.92299 * 3 2 1 33 33 H 1.09002 * 109.72487 * 170.47236 * 4 2 1 34 34 H 1.08996 * 109.72471 * 291.09442 * 4 2 1 35 35 H 1.09004 * 108.44906 * 205.85112 * 5 4 2 36 36 H 1.08998 * 108.46061 * 323.19344 * 5 4 2 37 37 H 1.08994 * 107.73093 * 192.05963 * 6 5 4 38 38 H 1.09001 * 107.69089 * 76.33803 * 6 5 4 39 39 H 1.07990 * 119.66571 * 359.97438 * 11 10 8 40 40 H 1.08007 * 119.87702 * 180.25983 * 12 11 10 41 41 H 0.97008 * 125.00734 * 0.02562 * 14 13 12 42 42 H 1.08001 * 125.01104 * 180.02562 * 15 14 13 43 43 H 1.09007 * 109.47133 * 224.99848 * 17 16 15 44 44 H 0.96700 * 113.99683 * 299.99871 * 18 17 16 45 45 H 1.07998 * 120.30321 * 0.02562 * 24 10 8 46 46 H 1.08998 * 109.90709 * 337.50168 * 25 7 6 47 47 H 1.08995 * 109.97484 * 216.38500 * 25 7 6 48 48 H 1.09002 * 109.04537 * 163.35603 * 26 25 7 49 49 H 1.09001 * 109.04851 * 44.46892 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4831 1.7568 0.0000 4 6 2.4913 -0.8882 1.5431 5 6 1.7981 -2.2138 1.6349 6 6 2.4538 -3.3390 0.8078 7 7 2.8528 -3.0359 -0.5754 8 6 4.0678 -3.4435 -0.9924 9 8 4.4043 -3.2690 -2.1476 10 6 4.9905 -4.1020 -0.0463 11 6 6.3034 -3.6313 0.0938 12 6 7.1660 -4.2262 0.9664 13 6 6.7535 -5.3194 1.7254 14 7 7.3814 -6.1079 2.6591 15 6 6.5195 -7.0677 3.1163 16 6 5.3287 -6.9402 2.5111 17 6 4.1114 -7.7998 2.7355 18 8 3.1564 -7.0786 3.5165 19 14 4.6058 -9.3528 3.6379 20 1 5.2069 -8.9943 4.9476 21 1 3.4062 -10.1997 3.8596 22 1 5.5981 -10.1023 2.8263 23 6 5.4378 -5.8054 1.5898 24 6 4.5576 -5.1933 0.7015 25 6 2.0222 -2.3329 -1.4998 26 6 2.4634 -0.8477 -1.4747 27 1 -0.3634 0.5149 0.8893 28 1 -0.3633 0.5126 -0.8907 29 1 -0.3633 -1.0277 0.0005 30 1 3.5730 1.7574 0.0015 31 1 2.1205 2.2700 -0.8907 32 1 2.1183 2.2708 0.8893 33 1 3.5680 -1.0404 1.4672 34 1 2.2655 -0.2929 2.4278 35 1 1.7766 -2.5201 2.6808 36 1 0.7701 -2.0900 1.2943 37 1 1.7576 -4.1770 0.7769 38 1 3.3426 -3.6700 1.3450 39 1 6.6340 -2.7873 -0.4930 40 1 8.1735 -3.8505 1.0673 41 1 8.3001 -6.0002 2.9512 42 1 6.7618 -7.8167 3.8558 43 1 3.6701 -8.0629 1.7741 44 1 3.4816 -6.8115 4.3871 45 1 3.5484 -5.5622 0.5932 46 1 0.9782 -2.4151 -1.1976 47 1 2.1516 -2.7416 -2.5019 48 1 2.0707 -0.3450 -2.3586 49 1 3.5522 -0.7997 -1.4941 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_13287722.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:16:35 Heat of formation + Delta-G solvation = -41.195202 kcal Electronic energy + Delta-G solvation = -29300.642426 eV Core-core repulsion = 25544.578724 eV Total energy + Delta-G solvation = -3756.063702 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 346.163 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.52673 -41.12638 -38.03661 -37.53084 -37.27401 -34.04103 -33.41436 -32.13170 -30.50159 -30.25701 -29.00960 -28.44854 -27.14765 -26.51477 -25.16038 -23.96526 -22.97576 -22.18344 -20.98158 -19.88849 -19.15642 -18.46584 -17.64718 -17.30748 -16.90640 -16.59234 -16.21415 -15.88073 -15.66079 -15.36616 -15.15409 -15.04145 -14.89080 -14.69155 -14.56723 -14.38698 -14.01550 -13.79952 -13.73201 -13.68094 -13.49726 -13.36453 -13.17652 -13.16496 -12.83053 -12.68753 -12.51091 -12.47911 -12.29165 -12.14645 -12.00867 -11.80524 -11.72166 -10.81160 -10.76961 -10.63275 -10.55583 -10.36812 -10.24564 -9.50793 -9.26522 -8.78438 -0.01424 0.33260 1.12565 1.34814 1.43590 1.53227 1.80877 1.83590 1.88220 1.92704 1.94473 1.99406 2.18529 2.72017 2.84596 3.48283 3.52910 3.67807 3.73108 3.82841 3.84508 4.11261 4.16612 4.33662 4.35138 4.40057 4.41091 4.44320 4.56486 4.61374 4.65468 4.70252 4.74527 4.77553 4.78317 4.79734 4.80642 4.93544 4.96250 5.03129 5.05811 5.22111 5.27742 5.38516 5.42842 5.50224 5.53141 5.53816 5.59069 5.59922 5.86464 6.00190 6.36550 6.44406 6.59139 7.34611 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.017 2.983 3 C -0.450 4.450 4 C -0.399 4.399 5 C -0.116 4.116 6 C 0.090 3.910 7 N -0.593 5.593 8 C 0.561 3.439 9 O -0.530 6.530 10 C -0.154 4.154 11 C -0.051 4.051 12 C -0.131 4.131 13 C 0.114 3.886 14 N -0.586 5.586 15 C 0.055 3.945 16 C -0.195 4.195 17 C -0.046 4.046 18 O -0.539 6.539 19 Si 0.946 3.054 20 H -0.253 1.253 21 H -0.250 1.250 22 H -0.250 1.250 23 C -0.095 4.095 24 C -0.029 4.029 25 C 0.131 3.869 26 C -0.452 4.452 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.067 0.933 31 H 0.067 0.933 32 H 0.068 0.932 33 H 0.074 0.926 34 H 0.076 0.924 35 H 0.077 0.923 36 H 0.062 0.938 37 H 0.066 0.934 38 H 0.093 0.907 39 H 0.132 0.868 40 H 0.128 0.872 41 H 0.421 0.579 42 H 0.172 0.828 43 H 0.115 0.885 44 H 0.374 0.626 45 H 0.133 0.867 46 H 0.080 0.920 47 H 0.084 0.916 48 H 0.083 0.917 49 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.786 -0.850 5.828 5.941 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.211 2.789 3 C -0.558 4.558 4 C -0.485 4.485 5 C -0.154 4.154 6 C -0.032 4.032 7 N -0.325 5.325 8 C 0.349 3.651 9 O -0.407 6.407 10 C -0.158 4.158 11 C -0.071 4.071 12 C -0.151 4.151 13 C 0.006 3.994 14 N -0.189 5.189 15 C -0.072 4.072 16 C -0.203 4.203 17 C -0.157 4.157 18 O -0.344 6.344 19 Si 0.768 3.232 20 H -0.177 1.177 21 H -0.173 1.173 22 H -0.174 1.174 23 C -0.100 4.100 24 C -0.048 4.048 25 C 0.008 3.992 26 C -0.538 4.538 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.093 0.907 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.080 0.920 37 H 0.084 0.916 38 H 0.111 0.889 39 H 0.150 0.850 40 H 0.145 0.855 41 H 0.258 0.742 42 H 0.189 0.811 43 H 0.132 0.868 44 H 0.221 0.779 45 H 0.150 0.850 46 H 0.098 0.902 47 H 0.102 0.898 48 H 0.102 0.898 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.916 -1.651 5.163 5.497 hybrid contribution 0.835 0.592 0.357 1.084 sum 1.751 -1.059 5.520 5.887 Atomic orbital electron populations 1.26219 1.20740 1.04287 1.04425 0.78824 0.67022 0.66450 0.66560 1.26127 1.06194 1.19124 1.04324 1.25625 1.05048 1.02740 1.15047 1.20980 0.99698 0.94482 1.00216 1.22174 1.02044 0.97619 0.81351 1.47063 1.16380 1.56755 1.12323 1.18385 0.81275 0.78083 0.87359 1.90810 1.75233 1.56223 1.18424 1.19557 0.95314 0.99905 1.01001 1.20462 0.91171 0.99140 0.96330 1.19695 1.00669 0.96014 0.98757 1.18408 0.92659 0.94731 0.93608 1.41711 1.14057 1.27122 1.35962 1.21704 0.89971 0.94658 1.00855 1.20687 0.96002 1.00800 1.02793 1.24284 0.89120 1.01424 1.00869 1.86518 1.39478 1.76830 1.31538 0.85786 0.80941 0.76837 0.79598 1.17674 1.17324 1.17379 1.18806 0.93038 0.97921 1.00218 1.20696 0.98803 0.93196 0.92134 1.20681 0.93919 0.90405 0.94242 1.26719 1.07452 1.02785 1.16867 0.91289 0.91229 0.91227 0.91383 0.91336 0.91308 0.90698 0.90517 0.90456 0.91976 0.91586 0.88934 0.84968 0.85456 0.74189 0.81140 0.86752 0.77907 0.84952 0.90179 0.89787 0.89834 0.90038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.62 8.35 101.05 0.84 1.46 16 2 Si 1.02 -1.69 10.48 -169.99 -1.78 -3.47 16 3 C -0.45 0.21 8.65 101.05 0.87 1.08 16 4 C -0.40 0.48 4.83 35.61 0.17 0.65 16 5 C -0.12 0.17 5.32 -27.62 -0.15 0.02 16 6 C 0.09 -0.04 4.77 -3.04 -0.01 -0.06 16 7 N -0.59 -0.85 2.45 -175.20 -0.43 -1.28 16 8 C 0.56 2.22 6.68 -12.42 -0.08 2.14 16 9 O -0.53 -4.03 16.41 5.29 0.09 -3.94 16 10 C -0.15 -0.40 4.77 -104.97 -0.50 -0.90 16 11 C -0.05 -0.09 9.65 -39.53 -0.38 -0.48 16 12 C -0.13 -0.06 10.00 -39.85 -0.40 -0.46 16 13 C 0.11 0.08 7.27 -83.95 -0.61 -0.53 16 14 N -0.59 0.96 6.05 -10.61 -0.06 0.90 16 15 C 0.05 -0.09 10.43 -16.73 -0.17 -0.27 16 16 C -0.20 0.04 5.58 -102.69 -0.57 -0.53 16 17 C -0.05 0.05 3.06 36.01 0.11 0.16 16 18 O -0.54 0.42 12.88 -35.23 -0.45 -0.04 16 19 Si 0.95 -1.75 26.08 -169.99 -4.43 -6.19 16 20 H -0.25 0.60 7.03 56.52 0.40 1.00 16 21 H -0.25 0.02 7.11 56.52 0.40 0.43 16 22 H -0.25 0.23 7.11 56.52 0.40 0.63 16 23 C -0.10 -0.14 6.34 -105.16 -0.67 -0.80 16 24 C -0.03 -0.05 7.42 -38.86 -0.29 -0.34 16 25 C 0.13 0.13 5.38 -4.97 -0.03 0.10 16 26 C -0.45 -0.17 4.50 38.19 0.17 0.00 16 27 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 28 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 29 H 0.07 -0.11 6.53 -51.92 -0.34 -0.45 16 30 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 31 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 32 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 33 H 0.07 -0.02 7.90 -51.93 -0.41 -0.43 16 34 H 0.08 -0.13 7.99 -51.93 -0.42 -0.54 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 36 H 0.06 -0.14 5.94 -51.93 -0.31 -0.44 16 37 H 0.07 -0.08 8.02 -51.93 -0.42 -0.50 16 38 H 0.09 0.00 4.52 -51.93 -0.23 -0.24 16 39 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 40 H 0.13 -0.21 8.06 -52.48 -0.42 -0.64 16 41 H 0.42 -1.88 8.96 -40.82 -0.37 -2.24 16 42 H 0.17 -0.74 6.30 -52.49 -0.33 -1.07 16 43 H 0.11 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.37 -1.47 8.70 45.56 0.40 -1.07 16 45 H 0.13 0.09 7.08 -52.49 -0.37 -0.28 16 46 H 0.08 -0.09 7.14 -51.93 -0.37 -0.46 16 47 H 0.08 0.22 7.40 -51.93 -0.38 -0.16 16 48 H 0.08 -0.01 7.89 -51.93 -0.41 -0.42 16 49 H 0.08 0.18 7.41 -51.93 -0.38 -0.20 16 LS Contribution 382.43 15.07 5.76 5.76 Total: 0.00 -7.88 382.43 -9.90 -17.78 By element: Atomic # 1 Polarization: -3.89 SS G_CDS: -6.89 Total: -10.79 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -1.69 Total: 1.26 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.49 Total: -0.38 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -0.37 Total: -3.98 kcal Atomic # 14 Polarization: -3.44 SS G_CDS: -6.22 Total: -9.66 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -7.88 -9.90 -17.78 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13287722.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.416 kcal (2) G-P(sol) polarization free energy of solvation -7.878 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.901 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.779 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds