Wall clock time and date at job start Thu Mar 4 2021 18:16:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86298 * 109.60468 * 2 1 4 4 C 1.88877 * 109.60795 * 120.33443 * 2 1 3 5 5 C 1.46938 * 108.02322 * 55.38163 * 4 2 1 6 6 C 1.52529 * 114.66246 * 62.65921 * 5 4 2 7 7 N 1.45044 * 107.75218 * 268.14279 * 6 5 4 8 8 C 1.34773 * 120.98607 * 285.04205 * 7 6 5 9 9 O 1.21514 * 120.00332 * 179.97438 * 8 7 6 10 10 C 1.48175 * 120.00153 * 359.97438 * 8 7 6 11 11 C 1.39262 * 119.72484 * 179.72819 * 10 8 7 12 12 C 1.38635 * 119.06251 * 179.73350 * 11 10 8 13 13 C 1.38593 * 118.48515 * 0.53000 * 12 11 10 14 14 C 1.50696 * 120.32341 * 179.70897 * 13 12 11 15 15 O 1.42898 * 109.47120 * 65.02386 * 14 13 12 16 16 Si 1.86306 * 109.46905 * 185.02231 * 14 13 12 17 17 H 1.48491 * 109.47042 * 59.99897 * 16 14 13 18 18 H 1.48504 * 109.46882 * 180.02562 * 16 14 13 19 19 H 1.48501 * 109.46972 * 300.00131 * 16 14 13 20 20 C 1.38606 * 119.34898 * 359.73110 * 13 12 11 21 21 N 1.31498 * 120.90378 * 359.97438 * 20 13 12 22 22 C 1.47152 * 118.16466 * 105.02279 * 7 6 5 23 23 C 1.53978 * 113.91284 * 320.05210 * 22 7 6 24 24 H 1.09008 * 109.47147 * 299.66908 * 1 2 3 25 25 H 1.09002 * 109.47439 * 59.66122 * 1 2 3 26 26 H 1.09001 * 109.47330 * 179.66791 * 1 2 3 27 27 H 1.09005 * 109.47274 * 180.33615 * 3 2 1 28 28 H 1.09003 * 109.47039 * 300.33291 * 3 2 1 29 29 H 1.08994 * 109.47361 * 60.33594 * 3 2 1 30 30 H 1.09007 * 109.74572 * 295.75269 * 4 2 1 31 31 H 1.08993 * 109.78975 * 175.04103 * 4 2 1 32 32 H 1.09002 * 108.41886 * 183.94931 * 5 4 2 33 33 H 1.08999 * 108.42031 * 301.37089 * 5 4 2 34 34 H 1.08996 * 109.78165 * 27.85732 * 6 5 4 35 35 H 1.09002 * 109.78340 * 148.68018 * 6 5 4 36 36 H 1.07997 * 120.46990 * 359.97438 * 11 10 8 37 37 H 1.07992 * 120.75845 * 180.23613 * 12 11 10 38 38 H 1.09001 * 109.47109 * 305.02182 * 14 13 12 39 39 H 0.96698 * 114.00396 * 59.99546 * 15 14 13 40 40 H 1.08002 * 119.54590 * 179.97438 * 20 13 12 41 41 H 1.08999 * 108.59463 * 198.90697 * 22 7 6 42 42 H 1.08993 * 108.59458 * 81.19779 * 22 7 6 43 43 H 1.09003 * 108.89010 * 196.65755 * 23 22 7 44 44 H 1.08999 * 108.81216 * 78.12973 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4881 1.7550 0.0000 4 6 2.4968 -0.8986 1.5357 5 6 1.9016 -2.2419 1.5545 6 6 2.2898 -3.1266 0.3741 7 7 1.2911 -2.9450 -0.6619 8 6 0.0682 -3.5006 -0.5519 9 8 -0.7550 -3.3365 -1.4305 10 6 -0.2725 -4.3117 0.6403 11 6 -1.5398 -4.8785 0.7507 12 6 -1.8420 -5.6395 1.8695 13 6 -0.8693 -5.7975 2.8439 14 6 -1.1555 -6.6107 4.0799 15 8 -1.3672 -7.9756 3.7136 16 14 0.2928 -6.4982 5.2465 17 1 0.5127 -5.0798 5.6270 18 1 0.0109 -7.3001 6.4642 19 1 1.5092 -7.0256 4.5776 20 6 0.3692 -5.1998 2.6707 21 7 0.6313 -4.4878 1.5966 22 6 1.6495 -2.1361 -1.8379 23 6 2.4850 -0.8864 -1.5047 24 1 -0.3634 0.5087 0.8930 25 1 -0.3634 0.5191 -0.8869 26 1 -0.3634 -1.0276 -0.0060 27 1 3.5781 1.7525 -0.0060 28 1 2.1211 2.2714 -0.8870 29 1 2.1309 2.2679 0.8929 30 1 2.2005 -0.3518 2.4309 31 1 3.5832 -0.9775 1.4950 32 1 2.2070 -2.7411 2.4741 33 1 0.8167 -2.1378 1.5646 34 1 3.2708 -2.8335 0.0003 35 1 2.3101 -4.1707 0.6866 36 1 -2.2754 -4.7306 -0.0260 37 1 -2.8149 -6.0948 1.9813 38 1 -2.0484 -6.2235 4.5708 39 1 -0.6117 -8.3858 3.2708 40 1 1.1295 -5.3205 3.4283 41 1 0.7323 -1.8189 -2.3341 42 1 2.2169 -2.7596 -2.5287 43 1 2.4537 -0.2042 -2.3543 44 1 3.5180 -1.1895 -1.3339 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:16:48 Heat of formation + Delta-G solvation = -45.967175 kcal Electronic energy + Delta-G solvation = -24671.687380 eV Core-core repulsion = 21327.406650 eV Total energy + Delta-G solvation = -3344.280731 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 308.147 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.11113 -40.41117 -37.99129 -37.81896 -34.29538 -33.77871 -33.00259 -31.50834 -29.18077 -28.43445 -27.80927 -27.14165 -25.05994 -24.46443 -22.90810 -22.59699 -20.49997 -18.85303 -18.49967 -17.87998 -17.16386 -16.72514 -16.67676 -16.30580 -16.19119 -15.38376 -15.24989 -15.17475 -14.95256 -14.59258 -14.46950 -14.29665 -13.91815 -13.86616 -13.72545 -13.55400 -13.42050 -13.22242 -13.14529 -12.79918 -12.66735 -12.35946 -12.31024 -12.15267 -12.06504 -11.77410 -11.20871 -11.00392 -10.80670 -10.72422 -10.65160 -10.31366 -10.28346 -10.20723 -9.54012 -0.55521 0.06180 0.94782 1.27385 1.35348 1.64173 1.69422 1.77010 1.81027 1.91259 1.95944 2.60907 2.70020 2.92304 3.24796 3.42373 3.54362 3.70744 3.92676 4.02075 4.05599 4.14498 4.25143 4.34738 4.36040 4.51157 4.57435 4.70430 4.70749 4.74968 4.76824 4.81359 4.83411 4.84830 4.95962 5.01074 5.02630 5.12829 5.24395 5.34558 5.44015 5.46939 5.50995 5.63125 5.73565 6.33402 6.36949 6.55559 7.13841 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.444 4.444 2 Si 0.992 3.008 3 C -0.447 4.447 4 C -0.397 4.397 5 C -0.111 4.111 6 C 0.106 3.894 7 N -0.591 5.591 8 C 0.573 3.427 9 O -0.529 6.529 10 C 0.080 3.920 11 C -0.107 4.107 12 C -0.051 4.051 13 C -0.150 4.150 14 C -0.079 4.079 15 O -0.534 6.534 16 Si 0.941 3.059 17 H -0.245 1.245 18 H -0.247 1.247 19 H -0.246 1.246 20 C 0.088 3.912 21 N -0.438 5.438 22 C 0.122 3.878 23 C -0.424 4.424 24 H 0.064 0.936 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.066 0.934 33 H 0.057 0.943 34 H 0.079 0.921 35 H 0.105 0.895 36 H 0.152 0.848 37 H 0.148 0.852 38 H 0.124 0.876 39 H 0.378 0.622 40 H 0.158 0.842 41 H 0.086 0.914 42 H 0.064 0.936 43 H 0.091 0.909 44 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.607 -0.390 2.793 3.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.551 4.551 2 Si 1.187 2.813 3 C -0.555 4.555 4 C -0.483 4.483 5 C -0.149 4.149 6 C -0.017 4.017 7 N -0.323 5.323 8 C 0.360 3.640 9 O -0.405 6.405 10 C -0.057 4.057 11 C -0.128 4.128 12 C -0.076 4.076 13 C -0.152 4.152 14 C -0.190 4.190 15 O -0.339 6.339 16 Si 0.763 3.237 17 H -0.168 1.168 18 H -0.171 1.171 19 H -0.170 1.170 20 C -0.072 4.072 21 N -0.149 5.149 22 C 0.000 4.000 23 C -0.509 4.509 24 H 0.084 0.916 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.094 0.906 31 H 0.093 0.907 32 H 0.085 0.915 33 H 0.076 0.924 34 H 0.097 0.903 35 H 0.122 0.878 36 H 0.169 0.831 37 H 0.166 0.834 38 H 0.142 0.858 39 H 0.226 0.774 40 H 0.174 0.826 41 H 0.105 0.895 42 H 0.082 0.918 43 H 0.109 0.891 44 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 3.117 0.259 2.990 4.327 hybrid contribution -0.628 -0.419 -0.431 0.869 sum 2.489 -0.160 2.559 3.574 Atomic orbital electron populations 1.26164 1.20483 1.04405 1.04089 0.79601 0.67667 0.66800 0.67195 1.26085 1.06210 1.18702 1.04468 1.25159 1.05016 1.03689 1.14465 1.20258 1.00886 0.94641 0.99119 1.21705 0.90687 1.02458 0.86844 1.47764 1.12761 1.49603 1.22201 1.17770 0.81781 0.79409 0.85048 1.90812 1.48440 1.60739 1.40492 1.21154 0.91595 0.98625 0.94351 1.22219 0.96864 0.95101 0.98630 1.21541 0.99806 0.94608 0.91684 1.21608 0.95399 0.99778 0.98459 1.24973 1.12363 0.83342 0.98366 1.86554 1.44014 1.22366 1.80996 0.85781 0.76418 0.82111 0.79401 1.16827 1.17072 1.16997 1.22791 0.95101 0.93835 0.95447 1.68185 1.32581 1.13379 1.00805 1.21200 1.00587 0.91697 0.86521 1.26521 1.04850 1.03045 1.16518 0.91632 0.91352 0.91435 0.91204 0.91291 0.91184 0.90632 0.90690 0.91537 0.92425 0.90302 0.87764 0.83051 0.83393 0.85848 0.77446 0.82560 0.89530 0.91790 0.89074 0.90182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 -0.41 8.41 101.05 0.85 0.44 16 2 Si 0.99 -1.49 10.48 -169.99 -1.78 -3.27 16 3 C -0.45 0.43 8.65 101.05 0.87 1.30 16 4 C -0.40 0.49 4.77 34.25 0.16 0.66 16 5 C -0.11 0.04 3.44 -29.88 -0.10 -0.06 16 6 C 0.11 -0.04 4.95 -5.06 -0.03 -0.06 16 7 N -0.59 -0.74 1.85 -174.99 -0.32 -1.06 16 8 C 0.57 1.89 5.88 -12.18 -0.07 1.82 16 9 O -0.53 -3.22 15.82 5.35 0.08 -3.13 16 10 C 0.08 0.15 6.12 -83.01 -0.51 -0.36 16 11 C -0.11 -0.09 9.63 -39.05 -0.38 -0.47 16 12 C -0.05 0.04 9.83 -39.30 -0.39 -0.35 16 13 C -0.15 0.20 5.37 -104.36 -0.56 -0.36 16 14 C -0.08 0.19 2.82 36.00 0.10 0.29 16 15 O -0.53 0.81 12.84 -35.23 -0.45 0.36 16 16 Si 0.94 -2.32 25.16 -169.99 -4.28 -6.60 16 17 H -0.24 0.46 7.11 56.52 0.40 0.87 16 18 H -0.25 0.19 7.11 56.52 0.40 0.59 16 19 H -0.25 0.62 7.04 56.52 0.40 1.02 16 20 C 0.09 -0.07 9.84 -17.56 -0.17 -0.24 16 21 N -0.44 -0.27 4.43 -9.79 -0.04 -0.31 16 22 C 0.12 0.06 5.72 -3.18 -0.02 0.05 16 23 C -0.42 0.61 4.37 37.67 0.16 0.78 16 24 H 0.06 0.05 7.96 -51.92 -0.41 -0.36 16 25 H 0.07 0.07 7.96 -51.93 -0.41 -0.34 16 26 H 0.07 0.18 5.80 -51.93 -0.30 -0.13 16 27 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 28 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 30 H 0.07 -0.08 8.00 -51.93 -0.42 -0.50 16 31 H 0.07 -0.15 8.00 -51.93 -0.42 -0.56 16 32 H 0.07 -0.03 7.95 -51.93 -0.41 -0.44 16 33 H 0.06 0.06 5.47 -51.93 -0.28 -0.22 16 34 H 0.08 -0.14 6.71 -51.93 -0.35 -0.48 16 35 H 0.10 -0.01 5.94 -51.93 -0.31 -0.32 16 36 H 0.15 0.10 7.64 -52.49 -0.40 -0.30 16 37 H 0.15 -0.34 8.06 -52.49 -0.42 -0.76 16 38 H 0.12 -0.40 7.96 -51.93 -0.41 -0.82 16 39 H 0.38 -1.74 8.70 45.56 0.40 -1.35 16 40 H 0.16 -0.41 4.88 -52.49 -0.26 -0.66 16 41 H 0.09 0.16 7.15 -51.93 -0.37 -0.21 16 42 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 43 H 0.09 -0.19 7.93 -51.93 -0.41 -0.60 16 44 H 0.08 -0.18 7.30 -51.93 -0.38 -0.56 16 LS Contribution 337.07 15.07 5.08 5.08 Total: 0.00 -5.68 337.07 -7.82 -13.50 By element: Atomic # 1 Polarization: -1.96 SS G_CDS: -6.03 Total: -7.99 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -0.07 Total: 3.43 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -0.37 Total: -1.37 kcal Atomic # 8 Polarization: -2.40 SS G_CDS: -0.37 Total: -2.77 kcal Atomic # 14 Polarization: -3.81 SS G_CDS: -6.06 Total: -9.87 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -5.68 -7.82 -13.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.469 kcal (2) G-P(sol) polarization free energy of solvation -5.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.498 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds