Wall clock time and date at job start Thu Mar 4 2021 18:18:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86307 * 1 3 3 C 1.86304 * 108.81669 * 2 1 4 4 C 1.84152 * 108.84536 * 118.48282 * 2 1 3 5 5 C 1.55339 * 109.12637 * 207.39544 * 4 2 1 6 6 C 1.45983 * 108.92188 * 290.55259 * 5 4 2 7 7 N 1.46267 * 114.57707 * 60.35198 * 6 5 4 8 8 C 1.34776 * 122.81946 * 79.19977 * 7 6 5 9 9 O 1.21591 * 119.99870 * 4.37441 * 8 7 6 10 10 C 1.47539 * 120.00545 * 184.37384 * 8 7 6 11 11 C 1.39674 * 120.18734 * 353.54030 * 10 8 7 12 12 C 1.37822 * 119.90808 * 179.73099 * 11 10 8 13 13 C 1.38511 * 120.30167 * 0.24439 * 12 11 10 14 14 C 1.50694 * 119.80827 * 180.02562 * 13 12 11 15 15 O 1.42899 * 109.47358 * 119.99966 * 14 13 12 16 16 Si 1.86302 * 109.46972 * 359.97438 * 14 13 12 17 17 H 1.48496 * 109.47187 * 60.00390 * 16 14 13 18 18 H 1.48500 * 109.47069 * 180.02562 * 16 14 13 19 19 H 1.48500 * 109.47195 * 300.00297 * 16 14 13 20 20 C 1.38100 * 120.38394 * 359.97438 * 13 12 11 21 21 C 1.38664 * 120.08975 * 0.02562 * 20 13 12 22 22 O 1.35653 * 120.15236 * 180.02562 * 21 20 13 23 23 C 1.44484 * 114.36241 * 259.46452 * 7 6 5 24 24 C 1.56282 * 107.52606 * 111.11933 * 23 7 6 25 25 H 1.09000 * 109.47047 * 301.52013 * 1 2 3 26 26 H 1.08997 * 109.46968 * 61.51344 * 1 2 3 27 27 H 1.08995 * 109.46913 * 181.52160 * 1 2 3 28 28 H 1.09002 * 109.46530 * 158.90679 * 3 2 1 29 29 H 1.08994 * 109.46943 * 278.90288 * 3 2 1 30 30 H 1.08998 * 109.47501 * 38.90675 * 3 2 1 31 31 H 1.09002 * 109.52894 * 87.49764 * 4 2 1 32 32 H 1.09001 * 109.58513 * 327.32186 * 4 2 1 33 33 H 1.08995 * 109.56207 * 170.72064 * 5 4 2 34 34 H 1.09001 * 109.65597 * 50.43704 * 5 4 2 35 35 H 1.09003 * 108.45711 * 299.03883 * 6 5 4 36 36 H 1.08995 * 108.33184 * 181.58478 * 6 5 4 37 37 H 1.07999 * 120.04555 * 359.97438 * 11 10 8 38 38 H 1.08001 * 119.85086 * 180.22909 * 12 11 10 39 39 H 1.09005 * 109.47157 * 240.00415 * 14 13 12 40 40 H 0.96696 * 114.00125 * 180.02562 * 15 14 13 41 41 H 1.08003 * 119.95515 * 180.02562 * 20 13 12 42 42 H 0.96703 * 113.99915 * 89.99945 * 22 21 20 43 43 H 1.09005 * 109.89331 * 230.32837 * 23 7 6 44 44 H 1.09001 * 109.89360 * 351.44549 * 23 7 6 45 45 H 1.08995 * 110.10068 * 204.82595 * 24 23 7 46 46 H 1.09000 * 110.14152 * 83.17249 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4640 1.7635 0.0000 4 6 2.4579 -0.8311 1.5319 5 6 3.8555 -0.2666 1.9073 6 6 4.8300 -0.7192 0.9191 7 7 4.5518 -0.2892 -0.4509 8 6 4.8375 0.9490 -0.9001 9 8 5.4203 1.7372 -0.1808 10 6 4.4430 1.3481 -2.2646 11 6 3.8955 0.4081 -3.1407 12 6 3.5238 0.7885 -4.4122 13 6 3.6953 2.0985 -4.8279 14 6 3.2845 2.5024 -6.2204 15 8 2.2890 3.5248 -6.1457 16 14 2.5910 1.0237 -7.1167 17 1 1.4080 0.5092 -6.3813 18 1 2.1868 1.4215 -8.4891 19 1 3.6260 -0.0384 -7.1943 20 6 4.2396 3.0370 -3.9734 21 6 4.6192 2.6718 -2.6906 22 8 5.1535 3.5927 -1.8500 23 6 3.9396 -1.3013 -1.2806 24 6 2.4721 -0.8482 -1.5699 25 1 -0.3633 0.5373 0.8760 26 1 -0.3633 0.4901 -0.9032 27 1 -0.3633 -1.0273 0.0273 28 1 3.4887 1.7980 0.3699 29 1 2.4306 2.1586 -1.0152 30 1 1.8243 2.3654 0.6454 31 1 2.5332 -1.9046 1.3582 32 1 1.7579 -0.6418 2.3456 33 1 4.1420 -0.6284 2.8948 34 1 3.8213 0.8229 1.9136 35 1 4.8614 -1.8086 0.9393 36 1 5.8110 -0.3415 1.2071 37 1 3.7599 -0.6145 -2.8208 38 1 3.0971 0.0617 -5.0875 39 1 4.1530 2.8796 -6.7604 40 1 1.9769 3.8336 -7.0073 41 1 4.3699 4.0567 -4.3046 42 1 4.5001 4.0587 -1.3105 43 1 4.4858 -1.3915 -2.2196 44 1 3.9376 -2.2579 -0.7581 45 1 1.8495 -1.7147 -1.7925 46 1 2.4532 -0.1480 -2.4050 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:18:26 Heat of formation + Delta-G solvation = -37.306250 kcal Electronic energy + Delta-G solvation = -27778.151111 eV Core-core repulsion = 24180.989665 eV Total energy + Delta-G solvation = -3597.161446 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 323.151 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.41191 -40.21272 -38.58849 -37.79709 -37.13012 -35.30963 -32.50969 -31.65046 -30.43817 -29.33324 -28.46148 -27.81402 -26.65533 -24.74416 -23.75720 -23.08039 -22.35037 -20.49555 -18.92530 -18.58288 -18.37593 -17.76943 -17.15932 -16.87219 -16.57037 -16.15879 -15.86780 -15.55884 -15.41991 -14.95590 -14.89595 -14.60184 -14.24219 -14.01978 -13.91711 -13.78120 -13.57781 -13.48884 -13.36797 -13.21259 -13.00968 -12.82239 -12.60777 -12.34354 -12.22310 -12.09690 -12.07276 -12.02898 -11.69080 -11.30646 -10.86194 -10.77355 -10.59302 -10.47154 -10.43451 -9.80789 -9.62021 -9.57061 -0.28027 0.23883 1.02707 1.34793 1.40945 1.64082 1.78309 1.81267 1.82417 1.90865 1.96383 2.62254 2.65868 3.20812 3.26566 3.44212 3.69351 3.77983 3.83933 3.89850 3.92872 4.07179 4.20998 4.24686 4.28363 4.41426 4.47331 4.54286 4.69128 4.70187 4.72352 4.76418 4.80508 4.82332 4.85721 4.89574 4.94478 5.05805 5.09603 5.17658 5.25298 5.34770 5.36033 5.48521 5.53333 5.64018 5.71507 6.38753 6.46513 6.79859 7.22185 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.453 4.453 2 Si 1.012 2.988 3 C -0.477 4.477 4 C -0.414 4.414 5 C -0.131 4.131 6 C 0.107 3.893 7 N -0.612 5.612 8 C 0.582 3.418 9 O -0.511 6.511 10 C -0.170 4.170 11 C -0.116 4.116 12 C -0.159 4.159 13 C -0.028 4.028 14 C -0.089 4.089 15 O -0.543 6.543 16 Si 0.946 3.054 17 H -0.244 1.244 18 H -0.255 1.255 19 H -0.248 1.248 20 C -0.135 4.135 21 C 0.175 3.825 22 O -0.476 6.476 23 C 0.092 3.908 24 C -0.472 4.472 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.092 0.908 29 H 0.063 0.937 30 H 0.065 0.935 31 H 0.075 0.925 32 H 0.078 0.922 33 H 0.081 0.919 34 H 0.076 0.924 35 H 0.082 0.918 36 H 0.076 0.924 37 H 0.202 0.798 38 H 0.128 0.872 39 H 0.081 0.919 40 H 0.382 0.618 41 H 0.139 0.861 42 H 0.395 0.605 43 H 0.095 0.905 44 H 0.099 0.901 45 H 0.093 0.907 46 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.857 -4.102 -2.750 5.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.560 4.560 2 Si 1.205 2.795 3 C -0.583 4.583 4 C -0.500 4.500 5 C -0.170 4.170 6 C -0.015 4.015 7 N -0.347 5.347 8 C 0.374 3.626 9 O -0.387 6.387 10 C -0.173 4.173 11 C -0.133 4.133 12 C -0.176 4.176 13 C -0.028 4.028 14 C -0.199 4.199 15 O -0.349 6.349 16 Si 0.768 3.232 17 H -0.168 1.168 18 H -0.180 1.180 19 H -0.171 1.171 20 C -0.153 4.153 21 C 0.129 3.871 22 O -0.287 6.287 23 C -0.030 4.030 24 C -0.557 4.557 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.110 0.890 29 H 0.082 0.918 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.096 0.904 33 H 0.099 0.901 34 H 0.095 0.905 35 H 0.100 0.900 36 H 0.094 0.906 37 H 0.217 0.783 38 H 0.145 0.855 39 H 0.099 0.901 40 H 0.230 0.770 41 H 0.156 0.844 42 H 0.254 0.746 43 H 0.112 0.888 44 H 0.118 0.882 45 H 0.112 0.888 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -2.191 -4.646 -2.378 5.660 hybrid contribution -0.526 0.744 -0.230 0.940 sum -2.717 -3.901 -2.609 5.423 Atomic orbital electron populations 1.26210 1.21255 1.04166 1.04360 0.78983 0.66358 0.67598 0.66539 1.26992 1.07963 1.19250 1.04104 1.26391 1.01241 1.06804 1.15557 1.20762 0.94491 1.02547 0.99150 1.20144 1.00008 1.00053 0.81248 1.47464 1.62430 1.12300 1.12472 1.17697 0.77863 0.80803 0.86275 1.90844 1.39896 1.50404 1.57597 1.20224 1.06854 0.95117 0.95138 1.23565 0.93200 1.04028 0.92465 1.20962 1.04052 0.95699 0.96921 1.19365 0.95989 0.93251 0.94242 1.24841 0.95203 1.01233 0.98618 1.86497 1.57482 1.56322 1.34599 0.85736 0.81369 0.77189 0.78878 1.16766 1.17950 1.17118 1.21230 1.00099 1.00738 0.93282 1.18481 0.91232 0.87659 0.89736 1.84764 1.35771 1.53114 1.55064 1.22140 0.92808 0.91932 0.96163 1.28559 0.99752 1.09435 1.17939 0.91384 0.91351 0.91421 0.88979 0.91753 0.91538 0.90579 0.90351 0.90082 0.90521 0.90005 0.90605 0.78268 0.85485 0.90092 0.76995 0.84355 0.74646 0.88788 0.88245 0.88792 0.86775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.30 8.65 101.05 0.87 1.18 16 2 Si 1.01 -1.72 9.89 -169.99 -1.68 -3.40 16 3 C -0.48 -0.46 6.76 101.05 0.68 0.22 16 4 C -0.41 0.69 4.72 38.40 0.18 0.87 16 5 C -0.13 0.09 5.50 -28.82 -0.16 -0.07 16 6 C 0.11 -0.08 4.87 -7.49 -0.04 -0.12 16 7 N -0.61 0.11 1.62 -197.23 -0.32 -0.21 16 8 C 0.58 1.66 4.15 -12.47 -0.05 1.61 16 9 O -0.51 -3.15 13.80 -16.49 -0.23 -3.38 16 10 C -0.17 -0.37 4.06 -104.84 -0.43 -0.80 16 11 C -0.12 0.00 5.58 -39.20 -0.22 -0.22 16 12 C -0.16 -0.02 8.61 -39.63 -0.34 -0.36 16 13 C -0.03 -0.03 5.43 -104.57 -0.57 -0.60 16 14 C -0.09 0.08 2.80 36.00 0.10 0.18 16 15 O -0.54 0.28 12.74 -35.23 -0.45 -0.16 16 16 Si 0.95 -1.41 25.05 -169.99 -4.26 -5.67 16 17 H -0.24 0.12 7.11 56.52 0.40 0.52 16 18 H -0.26 0.31 7.11 56.52 0.40 0.71 16 19 H -0.25 0.28 7.11 56.52 0.40 0.68 16 20 C -0.13 -0.27 9.53 -39.47 -0.38 -0.65 16 21 C 0.18 0.53 6.55 -38.70 -0.25 0.28 16 22 O -0.48 -1.78 11.60 -40.44 -0.47 -2.25 16 23 C 0.09 -0.27 5.23 -3.36 -0.02 -0.29 16 24 C -0.47 1.32 4.22 38.92 0.16 1.49 16 25 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 26 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 27 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 28 H 0.09 0.23 2.68 -51.93 -0.14 0.09 16 29 H 0.06 0.09 6.56 -51.93 -0.34 -0.25 16 30 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 31 H 0.08 -0.21 7.90 -51.93 -0.41 -0.62 16 32 H 0.08 -0.11 7.95 -51.93 -0.41 -0.52 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.08 0.08 6.02 -51.93 -0.31 -0.23 16 35 H 0.08 -0.25 7.17 -51.93 -0.37 -0.63 16 36 H 0.08 0.05 7.85 -51.93 -0.41 -0.36 16 37 H 0.20 -0.50 1.92 -75.53 -0.14 -0.64 16 38 H 0.13 -0.21 4.85 -52.49 -0.25 -0.47 16 39 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 40 H 0.38 -1.85 8.74 45.56 0.40 -1.45 16 41 H 0.14 0.19 8.06 -52.48 -0.42 -0.23 16 42 H 0.40 0.17 9.06 45.56 0.41 0.58 16 43 H 0.09 -0.35 5.67 -51.93 -0.29 -0.65 16 44 H 0.10 -0.50 7.17 -51.93 -0.37 -0.87 16 45 H 0.09 -0.41 8.00 -51.93 -0.42 -0.83 16 46 H 0.11 -0.24 3.93 -70.25 -0.28 -0.51 16 LS Contribution 334.21 15.07 5.04 5.04 Total: 0.00 -7.98 334.21 -7.86 -15.84 By element: Atomic # 1 Polarization: -3.48 SS G_CDS: -5.05 Total: -8.53 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -0.44 Total: 2.73 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.32 Total: -0.21 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: -1.15 Total: -5.79 kcal Atomic # 14 Polarization: -3.13 SS G_CDS: -5.94 Total: -9.07 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -7.98 -7.86 -15.84 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.464 kcal (2) G-P(sol) polarization free energy of solvation -7.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds