Wall clock time and date at job start Thu Mar 4 2021 18:26:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 C 1.46899 * 110.99711 * 2 1 4 4 C 1.39043 * 110.99798 * 236.04765 * 2 1 3 5 5 C 1.39192 * 119.93727 * 59.72848 * 4 2 1 6 6 C 1.37625 * 120.07175 * 179.72010 * 5 4 2 7 7 C 1.39780 * 119.92904 * 0.55324 * 6 5 4 8 8 C 1.47520 * 120.06630 * 179.74697 * 7 6 5 9 9 O 1.21599 * 119.99589 * 173.50703 * 8 7 6 10 10 N 1.34780 * 120.00324 * 353.50699 * 8 7 6 11 11 C 1.46274 * 122.82006 * 184.46400 * 10 8 7 12 12 C 1.45979 * 114.57981 * 79.19029 * 11 10 8 13 13 C 1.55342 * 108.91896 * 60.35547 * 12 11 10 14 14 Si 1.84152 * 109.12730 * 290.54997 * 13 12 11 15 15 C 1.86302 * 108.84529 * 207.39313 * 14 13 12 16 16 C 1.86297 * 108.84596 * 325.86099 * 14 13 12 17 17 C 1.88550 * 112.65872 * 86.57677 * 14 13 12 18 18 C 1.44481 * 122.81721 * 4.16598 * 10 8 7 19 19 C 1.39812 * 119.86072 * 359.71759 * 7 6 5 20 20 C 1.37580 * 119.93171 * 0.02562 * 19 7 6 21 21 C 1.50702 * 119.96571 * 180.02562 * 20 19 7 22 22 O 1.42898 * 109.47661 * 104.97664 * 21 20 19 23 23 Si 1.86295 * 109.47011 * 344.97340 * 21 20 19 24 24 H 1.48500 * 109.47265 * 60.00389 * 23 21 20 25 25 H 1.48506 * 109.47568 * 180.02562 * 23 21 20 26 26 H 1.48506 * 109.47405 * 300.00162 * 23 21 20 27 27 H 1.09003 * 109.47326 * 183.95511 * 1 2 3 28 28 H 1.09006 * 109.46912 * 63.95433 * 1 2 3 29 29 H 1.09002 * 109.47187 * 303.95641 * 1 2 3 30 30 H 1.08994 * 109.47226 * 56.04727 * 3 2 1 31 31 H 1.09007 * 109.46576 * 176.04358 * 3 2 1 32 32 H 1.09003 * 109.47533 * 296.04177 * 3 2 1 33 33 H 1.08000 * 119.96220 * 359.97438 * 5 4 2 34 34 H 1.08005 * 120.03599 * 180.26745 * 6 5 4 35 35 H 1.08997 * 108.46049 * 200.51147 * 11 10 8 36 36 H 1.09000 * 108.46021 * 318.03448 * 11 10 8 37 37 H 1.08994 * 109.55951 * 180.18283 * 12 11 10 38 38 H 1.08999 * 109.56326 * 300.41501 * 12 11 10 39 39 H 1.08996 * 109.53216 * 50.44919 * 13 12 11 40 40 H 1.09006 * 109.52798 * 170.58634 * 13 12 11 41 41 H 1.09006 * 109.46944 * 60.00250 * 15 14 13 42 42 H 1.09000 * 109.47226 * 179.97438 * 15 14 13 43 43 H 1.08993 * 109.47509 * 300.00386 * 15 14 13 44 44 H 1.08996 * 109.47083 * 40.52690 * 16 14 13 45 45 H 1.08999 * 109.46864 * 160.52732 * 16 14 13 46 46 H 1.08994 * 109.47376 * 280.52905 * 16 14 13 47 47 H 1.09000 * 110.07573 * 80.92594 * 17 14 13 48 48 H 1.08998 * 110.07733 * 202.41680 * 17 14 13 49 49 H 1.09003 * 109.89244 * 50.60164 * 18 10 8 50 50 H 1.08997 * 109.89165 * 171.70859 * 18 10 8 51 51 H 1.08004 * 120.02936 * 180.02562 * 19 7 6 52 52 H 1.08999 * 109.46989 * 224.97598 * 21 20 19 53 53 H 0.96704 * 114.00249 * 59.99480 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 1.6485 -0.3448 -2.3773 6 6 2.1449 -1.0569 -3.4452 7 6 2.9604 -2.1701 -3.2226 8 6 3.4895 -2.9389 -4.3650 9 8 4.2921 -3.8329 -4.1767 10 7 3.0835 -2.6506 -5.6174 11 6 3.4935 -3.4326 -6.7836 12 6 2.7627 -4.6833 -6.9636 13 6 1.2532 -4.3633 -7.1427 14 14 0.5727 -3.7496 -5.5454 15 6 -1.2455 -4.1489 -5.4727 16 6 1.4369 -4.6259 -4.1468 17 6 0.7971 -1.8903 -5.3267 18 6 2.2015 -1.5469 -5.9201 19 6 3.2742 -2.5528 -1.9150 20 6 2.7792 -1.8336 -0.8517 21 6 3.1174 -2.2452 0.5580 22 8 4.0864 -1.3443 1.0979 23 14 3.8127 -3.9735 0.5505 24 1 5.0407 -4.0094 -0.2837 25 1 4.1454 -4.3794 1.9397 26 1 2.8057 -4.9098 -0.0105 27 1 -0.3634 -1.0252 0.0709 28 1 -0.3633 0.4513 -0.9234 29 1 -0.3634 0.5740 0.8524 30 1 1.5898 1.9163 0.8524 31 1 3.0828 1.3432 0.0709 32 1 1.7044 1.8724 -0.9233 33 1 1.0144 0.5125 -2.5485 34 1 1.9007 -0.7588 -4.4542 35 1 3.3557 -2.8209 -7.6752 36 1 4.5539 -3.6659 -6.6872 37 1 3.1340 -5.1988 -7.8492 38 1 2.9017 -5.3166 -6.0874 39 1 1.1314 -3.5976 -7.9088 40 1 0.7223 -5.2667 -7.4430 41 1 -1.3836 -5.2280 -5.5422 42 1 -1.6589 -3.7902 -4.5301 43 1 -1.7578 -3.6629 -6.3029 44 1 2.4985 -4.7177 -4.3763 45 1 1.3120 -4.0540 -3.2274 46 1 1.0058 -5.6188 -4.0186 47 1 0.0195 -1.3532 -5.8699 48 1 0.7612 -1.6309 -4.2687 49 1 2.5790 -0.6336 -5.4601 50 1 2.1277 -1.4164 -6.9997 51 1 3.9045 -3.4122 -1.7399 52 1 2.2160 -2.2188 1.1703 53 1 3.7916 -0.4239 1.1323 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_13422196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:26:39 Heat of formation + Delta-G solvation = 19.308559 kcal Electronic energy + Delta-G solvation = -32112.949847 eV Core-core repulsion = 28304.886827 eV Total energy + Delta-G solvation = -3808.063020 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 350.194 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.49210 -40.82305 -38.14715 -37.70460 -37.57512 -35.10454 -32.73663 -31.32879 -30.94898 -29.23979 -28.51139 -28.38899 -27.42531 -26.82032 -25.91535 -24.27620 -23.03842 -22.82968 -22.17863 -20.32127 -18.71550 -18.32989 -17.82484 -17.49687 -16.95081 -16.58537 -16.45761 -16.15464 -15.95957 -15.77225 -15.23120 -15.17578 -14.97907 -14.73111 -14.48721 -14.29465 -13.99354 -13.90667 -13.80531 -13.60648 -13.56858 -13.31909 -13.29656 -13.06596 -13.03019 -12.73270 -12.68606 -12.59954 -12.46150 -12.27013 -12.14667 -12.04146 -11.89140 -11.51042 -11.34180 -11.12861 -10.95532 -10.77267 -10.54179 -10.46309 -9.96597 -9.75054 -9.57796 -9.45103 -0.35280 0.19204 1.09530 1.33445 1.38607 1.63324 1.74574 1.82306 1.87267 1.98816 2.00496 2.62917 2.73552 2.79307 3.45376 3.57994 3.73593 3.91132 3.92789 4.01231 4.08053 4.09231 4.18710 4.24520 4.35496 4.43228 4.47295 4.49820 4.53061 4.61925 4.64285 4.65448 4.68324 4.73144 4.77657 4.79252 4.80893 4.82296 4.86978 4.95272 5.02052 5.03705 5.05867 5.08359 5.13388 5.22620 5.26356 5.41101 5.45110 5.54464 5.56281 5.60225 5.64231 5.84675 6.27217 6.33465 6.67014 7.03247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.526 5.526 3 C 0.023 3.977 4 C 0.134 3.866 5 C -0.162 4.162 6 C -0.109 4.109 7 C -0.154 4.154 8 C 0.577 3.423 9 O -0.581 6.581 10 N -0.603 5.603 11 C 0.102 3.898 12 C -0.134 4.134 13 C -0.413 4.413 14 Si 1.050 2.950 15 C -0.461 4.461 16 C -0.505 4.505 17 C -0.459 4.459 18 C 0.079 3.921 19 C -0.079 4.079 20 C -0.123 4.123 21 C -0.061 4.061 22 O -0.549 6.549 23 Si 1.005 2.995 24 H -0.280 1.280 25 H -0.259 1.259 26 H -0.253 1.253 27 H 0.065 0.935 28 H 0.047 0.953 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.069 0.931 32 H 0.044 0.956 33 H 0.158 0.842 34 H 0.228 0.772 35 H 0.122 0.878 36 H 0.053 0.947 37 H 0.089 0.911 38 H 0.045 0.955 39 H 0.104 0.896 40 H 0.074 0.926 41 H 0.055 0.945 42 H 0.064 0.936 43 H 0.081 0.919 44 H 0.071 0.929 45 H 0.054 0.946 46 H 0.049 0.951 47 H 0.128 0.872 48 H 0.110 0.890 49 H 0.111 0.889 50 H 0.137 0.863 51 H 0.111 0.889 52 H 0.096 0.904 53 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.371 8.393 -5.170 12.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.248 5.248 3 C -0.123 4.123 4 C 0.040 3.960 5 C -0.182 4.182 6 C -0.126 4.126 7 C -0.157 4.157 8 C 0.369 3.631 9 O -0.462 6.462 10 N -0.335 5.335 11 C -0.020 4.020 12 C -0.172 4.172 13 C -0.500 4.500 14 Si 1.241 2.759 15 C -0.568 4.568 16 C -0.606 4.606 17 C -0.546 4.546 18 C -0.042 4.042 19 C -0.099 4.099 20 C -0.124 4.124 21 C -0.171 4.171 22 O -0.357 6.357 23 Si 0.830 3.170 24 H -0.206 1.206 25 H -0.183 1.183 26 H -0.177 1.177 27 H 0.083 0.917 28 H 0.065 0.935 29 H 0.106 0.894 30 H 0.108 0.892 31 H 0.088 0.912 32 H 0.063 0.937 33 H 0.176 0.824 34 H 0.243 0.757 35 H 0.140 0.860 36 H 0.072 0.928 37 H 0.107 0.893 38 H 0.063 0.937 39 H 0.122 0.878 40 H 0.093 0.907 41 H 0.075 0.925 42 H 0.083 0.917 43 H 0.100 0.900 44 H 0.089 0.911 45 H 0.073 0.927 46 H 0.068 0.932 47 H 0.147 0.853 48 H 0.128 0.872 49 H 0.128 0.872 50 H 0.155 0.845 51 H 0.129 0.871 52 H 0.114 0.886 53 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges -6.083 6.317 -4.543 9.877 hybrid contribution -0.358 0.275 -0.128 0.469 sum -6.441 6.592 -4.671 10.333 Atomic orbital electron populations 1.22550 0.84222 1.02970 1.02464 1.59418 1.09909 1.15186 1.40284 1.22589 1.00991 0.86205 1.02515 1.18932 0.93949 0.92874 0.90270 1.21939 1.02624 1.01735 0.91919 1.24016 0.91438 0.91798 1.05347 1.19739 1.03873 0.99826 0.92241 1.18087 0.79555 0.82070 0.83351 1.90783 1.36052 1.33988 1.85418 1.47500 1.48945 1.31307 1.05702 1.20313 0.99082 0.94503 0.88067 1.20743 0.96170 0.97917 1.02370 1.26394 0.99302 1.07116 1.17172 0.78498 0.64775 0.67535 0.65131 1.26314 1.21280 1.04564 1.04604 1.27488 1.09328 1.07904 1.15902 1.28345 0.99843 1.19769 1.06600 1.22545 0.88161 0.88913 1.04545 1.21126 0.97344 0.98935 0.92456 1.20068 0.99915 0.96883 0.95525 1.24835 0.97310 1.03626 0.91365 1.86659 1.42120 1.22023 1.84855 0.84585 0.79230 0.73712 0.79506 1.20596 1.18334 1.17691 0.91651 0.93461 0.89436 0.89215 0.91226 0.93727 0.82450 0.75664 0.85990 0.92834 0.89296 0.93677 0.87777 0.90700 0.92529 0.91692 0.90026 0.91056 0.92694 0.93178 0.85349 0.87225 0.87178 0.84529 0.87087 0.88582 0.77302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.14 9.33 127.69 1.19 1.05 16 2 N -0.53 1.60 3.70 -745.08 -2.76 -1.16 16 3 C 0.02 -0.14 9.10 127.69 1.16 1.02 16 4 C 0.13 0.03 4.66 38.47 0.18 0.21 16 5 C -0.16 0.61 8.49 22.35 0.19 0.80 16 6 C -0.11 0.31 5.57 22.50 0.13 0.43 16 7 C -0.15 -0.84 4.05 -20.08 -0.08 -0.92 16 8 C 0.58 4.56 4.15 86.69 0.36 4.92 16 9 O -0.58 -10.16 14.98 -4.03 -0.06 -10.22 16 10 N -0.60 0.61 1.62 -899.81 -1.46 -0.84 16 11 C 0.10 -0.21 4.87 84.27 0.41 0.20 16 12 C -0.13 0.08 5.51 29.24 0.16 0.24 16 13 C -0.41 1.96 4.72 72.79 0.34 2.30 16 14 Si 1.05 -4.39 9.89 68.60 0.68 -3.71 16 15 C -0.46 1.19 8.65 113.37 0.98 2.17 16 16 C -0.50 -3.26 6.75 113.37 0.77 -2.50 16 17 C -0.46 4.58 4.22 73.12 0.31 4.89 16 18 C 0.08 -0.80 5.23 87.90 0.46 -0.34 16 19 C -0.08 -0.76 8.02 22.50 0.18 -0.58 16 20 C -0.12 -0.70 5.28 -19.78 -0.10 -0.80 16 21 C -0.06 -0.36 2.29 71.24 0.16 -0.19 16 22 O -0.55 -3.70 12.65 -148.98 -1.89 -5.59 16 23 Si 1.01 9.45 25.74 68.60 1.77 11.22 16 24 H -0.28 -4.03 6.73 99.48 0.67 -3.36 16 25 H -0.26 -2.50 7.11 99.48 0.71 -1.80 16 26 H -0.25 -2.44 7.11 99.48 0.71 -1.74 16 27 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 28 H 0.05 -0.38 7.08 -2.38 -0.02 -0.40 16 29 H 0.09 -0.66 8.12 -2.39 -0.02 -0.68 16 30 H 0.09 -0.74 8.12 -2.39 -0.02 -0.76 16 31 H 0.07 -0.37 7.41 -2.38 -0.02 -0.39 16 32 H 0.04 -0.35 7.33 -2.39 -0.02 -0.37 16 33 H 0.16 -1.47 6.98 -2.91 -0.02 -1.49 16 34 H 0.23 -2.16 1.90 -25.91 -0.05 -2.21 16 35 H 0.12 -1.21 7.17 -2.39 -0.02 -1.22 16 36 H 0.05 0.15 7.85 -2.39 -0.02 0.13 16 37 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.04 0.27 6.02 -2.39 -0.01 0.25 16 39 H 0.10 -1.03 7.90 -2.39 -0.02 -1.05 16 40 H 0.07 -0.26 7.95 -2.38 -0.02 -0.28 16 41 H 0.06 -0.01 7.96 -2.38 -0.02 -0.03 16 42 H 0.06 -0.13 7.96 -2.39 -0.02 -0.14 16 43 H 0.08 -0.43 7.96 -2.39 -0.02 -0.44 16 44 H 0.07 0.78 2.68 -2.39 -0.01 0.77 16 45 H 0.05 0.43 6.55 -2.39 -0.02 0.41 16 46 H 0.05 0.39 7.96 -2.39 -0.02 0.38 16 47 H 0.13 -2.01 8.00 -2.39 -0.02 -2.03 16 48 H 0.11 -0.91 3.93 -20.28 -0.08 -0.99 16 49 H 0.11 -1.38 5.68 -2.39 -0.01 -1.40 16 50 H 0.14 -2.27 7.17 -2.39 -0.02 -2.28 16 51 H 0.11 1.59 4.47 -2.91 -0.01 1.57 16 52 H 0.10 0.26 7.78 -2.39 -0.02 0.24 16 53 H 0.38 0.50 7.48 -74.05 -0.55 -0.05 16 Total: 0.00 -21.36 376.14 4.06 -17.30 By element: Atomic # 1 Polarization: -20.85 SS G_CDS: 0.98 Total: -19.87 kcal Atomic # 6 Polarization: 6.09 SS G_CDS: 6.80 Total: 12.89 kcal Atomic # 7 Polarization: 2.21 SS G_CDS: -4.22 Total: -2.01 kcal Atomic # 8 Polarization: -13.87 SS G_CDS: -1.95 Total: -15.81 kcal Atomic # 14 Polarization: 5.06 SS G_CDS: 2.44 Total: 7.50 kcal Total: -21.36 4.06 -17.30 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13422196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.610 kcal (2) G-P(sol) polarization free energy of solvation -21.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.248 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.061 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.301 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds