Wall clock time and date at job start Thu Mar 4 2021 18:27:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86291 * 108.82128 * 2 1 4 4 C 1.84157 * 108.84313 * 118.48633 * 2 1 3 5 5 C 1.55343 * 109.12098 * 207.39000 * 4 2 1 6 6 C 1.45976 * 108.92369 * 290.54755 * 5 4 2 7 7 N 1.46273 * 114.57748 * 60.36319 * 6 5 4 8 8 C 1.34775 * 122.82241 * 79.18742 * 7 6 5 9 9 O 1.21654 * 119.99896 * 3.01087 * 8 7 6 10 10 C 1.47043 * 119.99973 * 183.00870 * 8 7 6 11 11 C 1.36229 * 123.49203 * 172.01234 * 10 8 7 12 12 Cl 1.73595 * 124.60507 * 0.27066 * 11 10 8 13 13 S 1.70446 * 110.79045 * 179.97438 * 11 10 8 14 14 C 1.75506 * 92.46575 * 0.02562 * 13 11 10 15 15 C 1.50691 * 124.68499 * 180.02562 * 14 13 11 16 16 O 1.42906 * 109.47227 * 244.97323 * 15 14 13 17 17 Si 1.86302 * 109.47473 * 4.97289 * 15 14 13 18 18 H 1.48504 * 109.47019 * 300.00367 * 17 15 14 19 19 H 1.48500 * 109.47059 * 59.99741 * 17 15 14 20 20 H 1.48494 * 109.47495 * 180.02562 * 17 15 14 21 21 C 1.32693 * 110.62868 * 359.97438 * 14 13 11 22 22 C 1.44485 * 114.35824 * 259.46178 * 7 6 5 23 23 C 1.56283 * 107.52691 * 111.11421 * 22 7 6 24 24 H 1.09006 * 109.46893 * 301.51673 * 1 2 3 25 25 H 1.09005 * 109.47045 * 61.51330 * 1 2 3 26 26 H 1.08998 * 109.47440 * 181.51993 * 1 2 3 27 27 H 1.09003 * 109.47453 * 156.33300 * 3 2 1 28 28 H 1.09001 * 109.47360 * 276.33224 * 3 2 1 29 29 H 1.09006 * 109.47099 * 36.33173 * 3 2 1 30 30 H 1.08997 * 109.53005 * 87.49726 * 4 2 1 31 31 H 1.08997 * 109.58726 * 327.31963 * 4 2 1 32 32 H 1.09008 * 109.55911 * 170.71760 * 5 4 2 33 33 H 1.08997 * 109.65733 * 50.44163 * 5 4 2 34 34 H 1.08998 * 108.46509 * 299.04026 * 6 5 4 35 35 H 1.08997 * 108.33391 * 181.58693 * 6 5 4 36 36 H 1.08995 * 109.47610 * 124.97403 * 15 14 13 37 37 H 0.96697 * 114.00340 * 180.02562 * 16 15 14 38 38 H 1.07993 * 123.45141 * 179.97438 * 21 14 13 39 39 H 1.08996 * 109.89772 * 230.32627 * 22 7 6 40 40 H 1.09007 * 109.89045 * 351.44252 * 22 7 6 41 41 H 1.09002 * 110.09859 * 204.82629 * 23 22 7 42 42 H 1.08996 * 110.23534 * 83.22683 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4640 1.7633 0.0000 4 6 2.4578 -0.8313 1.5319 5 6 3.8555 -0.2667 1.9072 6 6 4.8299 -0.7195 0.9191 7 7 4.5518 -0.2893 -0.4510 8 6 4.8375 0.9489 -0.9001 9 8 5.3984 1.7457 -0.1718 10 6 4.4711 1.3366 -2.2704 11 6 4.5809 2.6082 -2.7466 12 17 5.1698 3.9579 -1.8272 13 16 4.0693 2.6925 -4.3703 14 6 3.6949 0.9786 -4.4205 15 6 3.1516 0.2545 -5.6252 16 8 1.8355 -0.2239 -5.3399 17 14 3.0870 1.4225 -7.0751 18 1 2.2034 2.5702 -6.7472 19 1 4.4546 1.9197 -7.3715 20 1 2.5510 0.7092 -8.2620 21 6 3.9574 0.4083 -3.2515 22 6 3.9395 -1.3014 -1.2807 23 6 2.4720 -0.8482 -1.5699 24 1 -0.3633 0.5372 0.8761 25 1 -0.3633 0.4902 -0.9033 26 1 -0.3634 -1.0273 0.0273 27 1 3.4721 1.8036 0.4125 28 1 2.4739 2.1438 -1.0214 29 1 1.7975 2.3743 0.6089 30 1 2.5330 -1.9047 1.3582 31 1 1.7578 -0.6420 2.3456 32 1 4.1420 -0.6286 2.8948 33 1 3.8213 0.8227 1.9136 34 1 4.8613 -1.8089 0.9392 35 1 5.8110 -0.3419 1.2071 36 1 3.8000 -0.5879 -5.8659 37 1 1.4232 -0.7016 -6.0726 38 1 3.8022 -0.6419 -3.0533 39 1 4.4856 -1.3917 -2.2196 40 1 3.9374 -2.2580 -0.7581 41 1 1.8494 -1.7148 -1.7926 42 1 2.4512 -0.1486 -2.4054 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:27:12 Heat of formation + Delta-G solvation = -18.669309 kcal Electronic energy + Delta-G solvation = -26181.630292 eV Core-core repulsion = 22633.311651 eV Total energy + Delta-G solvation = -3548.318642 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 347.069 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.95510 -39.02477 -38.10196 -37.56700 -37.19555 -34.52891 -31.89472 -31.00533 -29.17995 -28.35925 -27.49820 -26.89440 -25.55024 -23.91138 -22.27242 -21.53679 -19.99855 -19.04569 -18.56155 -17.75543 -17.26637 -16.84453 -16.51439 -16.18379 -15.69367 -15.36763 -15.03934 -14.98152 -14.75127 -14.41419 -14.31973 -13.94614 -13.82659 -13.72273 -13.39871 -13.30923 -13.16497 -13.05423 -12.90655 -12.73855 -12.55548 -12.36750 -12.23032 -12.12816 -12.03014 -11.85634 -11.81813 -11.54380 -10.78097 -10.66627 -10.54303 -10.50920 -10.45882 -9.77255 -9.60635 -9.45225 -0.50272 -0.14460 0.50496 0.78016 0.94518 1.15912 1.30348 1.33168 1.75772 1.76328 1.91985 1.96587 2.05504 2.30746 2.76131 3.12481 3.50660 3.70772 3.92153 3.93796 4.01297 4.03417 4.19370 4.27870 4.33363 4.47008 4.52228 4.65513 4.78621 4.80561 4.84423 4.87243 4.88113 4.95795 4.99788 5.01095 5.03665 5.23845 5.33250 5.40231 5.55952 5.57467 5.84715 6.37905 6.40457 7.20132 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.003 2.997 3 C -0.472 4.472 4 C -0.412 4.412 5 C -0.132 4.132 6 C 0.109 3.891 7 N -0.607 5.607 8 C 0.599 3.401 9 O -0.513 6.513 10 C -0.154 4.154 11 C -0.111 4.111 12 Cl 0.025 6.975 13 S 0.212 5.788 14 C -0.203 4.203 15 C -0.036 4.036 16 O -0.540 6.540 17 Si 0.877 3.123 18 H -0.227 1.227 19 H -0.230 1.230 20 H -0.225 1.225 21 C -0.096 4.096 22 C 0.096 3.904 23 C -0.455 4.455 24 H 0.065 0.935 25 H 0.067 0.933 26 H 0.066 0.934 27 H 0.091 0.909 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.075 0.925 31 H 0.077 0.923 32 H 0.080 0.920 33 H 0.077 0.923 34 H 0.082 0.918 35 H 0.075 0.925 36 H 0.090 0.910 37 H 0.384 0.616 38 H 0.201 0.799 39 H 0.086 0.914 40 H 0.096 0.904 41 H 0.090 0.910 42 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.602 -5.611 -4.080 7.120 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.197 2.803 3 C -0.578 4.578 4 C -0.499 4.499 5 C -0.170 4.170 6 C -0.012 4.012 7 N -0.341 5.341 8 C 0.388 3.612 9 O -0.389 6.389 10 C -0.173 4.173 11 C -0.257 4.257 12 Cl 0.055 6.945 13 S 0.478 5.522 14 C -0.319 4.319 15 C -0.149 4.149 16 O -0.346 6.346 17 Si 0.696 3.304 18 H -0.150 1.150 19 H -0.153 1.153 20 H -0.147 1.147 21 C -0.124 4.124 22 C -0.027 4.027 23 C -0.540 4.540 24 H 0.085 0.915 25 H 0.087 0.913 26 H 0.085 0.915 27 H 0.110 0.890 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.094 0.906 31 H 0.096 0.904 32 H 0.099 0.901 33 H 0.096 0.904 34 H 0.100 0.900 35 H 0.094 0.906 36 H 0.108 0.892 37 H 0.232 0.768 38 H 0.217 0.783 39 H 0.104 0.896 40 H 0.114 0.886 41 H 0.108 0.892 42 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -1.192 -3.004 -4.801 5.787 hybrid contribution -0.173 -1.471 1.039 1.809 sum -1.364 -4.475 -3.762 6.004 Atomic orbital electron populations 1.26190 1.21278 1.04050 1.04256 0.79129 0.66522 0.67839 0.66794 1.26964 1.07809 1.18835 1.04235 1.26378 1.01177 1.06735 1.15570 1.20770 0.94544 1.02643 0.99079 1.20140 0.99950 1.00023 0.81136 1.47372 1.62099 1.12127 1.12519 1.16990 0.77756 0.81046 0.85445 1.90875 1.41030 1.49829 1.57190 1.20105 1.08839 0.91876 0.96460 1.25338 1.06631 0.94058 0.99717 1.98435 1.85334 1.39405 1.71375 1.83378 1.59728 1.06084 1.03042 1.23554 1.11804 0.96479 1.00092 1.23880 0.87015 1.03106 1.00895 1.86511 1.27720 1.76814 1.43587 0.86474 0.84082 0.81207 0.78605 1.14963 1.15279 1.14690 1.22507 0.96448 1.03368 0.90046 1.22123 0.93075 0.91518 0.95986 1.28220 0.99473 1.09109 1.17234 0.91537 0.91346 0.91507 0.89028 0.91794 0.91757 0.90638 0.90442 0.90140 0.90432 0.89981 0.90632 0.89212 0.76757 0.78295 0.89602 0.88574 0.89155 0.87178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 -0.10 8.65 101.05 0.87 0.77 16 2 Si 1.00 -0.77 9.91 -169.99 -1.68 -2.45 16 3 C -0.47 -1.13 6.80 101.05 0.69 -0.44 16 4 C -0.41 0.43 4.72 38.40 0.18 0.61 16 5 C -0.13 0.03 5.50 -28.82 -0.16 -0.13 16 6 C 0.11 -0.06 4.86 -7.49 -0.04 -0.10 16 7 N -0.61 -0.06 1.62 -178.74 -0.29 -0.35 16 8 C 0.60 1.79 4.16 -12.69 -0.05 1.74 16 9 O -0.51 -3.06 13.50 5.23 0.07 -2.99 16 10 C -0.15 -0.35 4.11 -104.58 -0.43 -0.78 16 11 C -0.11 -0.33 6.62 30.01 0.20 -0.13 16 12 Cl 0.03 0.11 27.23 -51.86 -1.41 -1.31 16 13 S 0.21 0.24 20.19 -107.50 -2.17 -1.93 16 14 C -0.20 0.01 5.69 -36.20 -0.21 -0.20 16 15 C -0.04 0.08 2.93 36.00 0.11 0.19 16 16 O -0.54 1.30 12.86 -35.23 -0.45 0.85 16 17 Si 0.88 -1.58 26.20 -169.99 -4.45 -6.03 16 18 H -0.23 0.07 7.11 56.52 0.40 0.47 16 19 H -0.23 0.25 7.11 56.52 0.40 0.65 16 20 H -0.22 0.51 7.11 56.52 0.40 0.91 16 21 C -0.10 0.00 5.94 -39.00 -0.23 -0.23 16 22 C 0.10 -0.24 5.24 -3.35 -0.02 -0.25 16 23 C -0.45 0.86 4.21 38.92 0.16 1.03 16 24 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 25 H 0.07 0.05 7.96 -51.93 -0.41 -0.37 16 26 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 27 H 0.09 0.34 2.73 -51.93 -0.14 0.20 16 28 H 0.06 0.20 6.38 -51.93 -0.33 -0.13 16 29 H 0.06 0.16 7.96 -51.93 -0.41 -0.25 16 30 H 0.07 -0.17 7.90 -51.93 -0.41 -0.58 16 31 H 0.08 -0.06 7.95 -51.93 -0.41 -0.47 16 32 H 0.08 -0.08 8.14 -51.92 -0.42 -0.50 16 33 H 0.08 0.13 5.97 -51.93 -0.31 -0.18 16 34 H 0.08 -0.24 7.17 -51.93 -0.37 -0.61 16 35 H 0.08 0.05 7.87 -51.93 -0.41 -0.36 16 36 H 0.09 -0.42 7.96 -51.93 -0.41 -0.83 16 37 H 0.38 -2.55 8.74 45.56 0.40 -2.15 16 38 H 0.20 -0.41 3.00 -52.49 -0.16 -0.57 16 39 H 0.09 -0.29 5.44 -51.93 -0.28 -0.57 16 40 H 0.10 -0.43 7.17 -51.92 -0.37 -0.80 16 41 H 0.09 -0.28 8.00 -51.93 -0.42 -0.70 16 42 H 0.11 -0.09 4.17 -51.96 -0.22 -0.31 16 LS Contribution 332.72 15.07 5.01 5.01 Total: 0.00 -6.08 332.72 -9.02 -15.10 By element: Atomic # 1 Polarization: -3.24 SS G_CDS: -4.72 Total: -7.96 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: 1.08 Total: 2.07 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.29 Total: -0.35 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -0.38 Total: -2.15 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: -6.14 Total: -8.48 kcal Atomic # 16 Polarization: 0.24 SS G_CDS: -2.17 Total: -1.93 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.31 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -6.08 -9.02 -15.10 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.573 kcal (2) G-P(sol) polarization free energy of solvation -6.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.019 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.097 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds