Wall clock time and date at job start Thu Mar 4 2021 18:27:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86299 * 108.82041 * 2 1 4 4 C 1.84153 * 108.84335 * 118.48312 * 2 1 3 5 5 C 1.55336 * 109.12365 * 207.39114 * 4 2 1 6 6 C 1.45976 * 108.92341 * 290.54833 * 5 4 2 7 7 N 1.46275 * 114.57714 * 60.36140 * 6 5 4 8 8 C 1.34776 * 122.82053 * 79.18547 * 7 6 5 9 9 O 1.21613 * 119.99905 * 183.87001 * 8 7 6 10 10 C 1.47384 * 120.00305 * 3.88203 * 8 7 6 11 11 C 1.36416 * 127.18734 * 351.62993 * 10 8 7 12 12 O 1.33647 * 108.39777 * 180.02562 * 11 10 8 13 13 C 1.34217 * 110.90700 * 359.97438 * 12 11 10 14 14 C 1.50701 * 125.43985 * 180.02562 * 13 12 11 15 15 O 1.42899 * 109.47208 * 245.02652 * 14 13 12 16 16 Si 1.86305 * 109.46984 * 5.02622 * 14 13 12 17 17 H 1.48495 * 109.46898 * 299.99779 * 16 14 13 18 18 H 1.48499 * 109.46993 * 59.99971 * 16 14 13 19 19 H 1.48499 * 109.46973 * 180.02562 * 16 14 13 20 20 C 1.34181 * 109.12488 * 0.26496 * 13 12 11 21 21 C 1.44478 * 114.35620 * 259.46232 * 7 6 5 22 22 C 1.56289 * 107.52843 * 111.11602 * 21 7 6 23 23 H 1.09004 * 109.47093 * 301.51790 * 1 2 3 24 24 H 1.09003 * 109.47375 * 61.51709 * 1 2 3 25 25 H 1.08996 * 109.47502 * 181.51507 * 1 2 3 26 26 H 1.08994 * 109.47066 * 158.11404 * 3 2 1 27 27 H 1.09005 * 109.46777 * 278.11434 * 3 2 1 28 28 H 1.08999 * 109.46960 * 38.10954 * 3 2 1 29 29 H 1.08997 * 109.53012 * 87.49739 * 4 2 1 30 30 H 1.09000 * 109.58452 * 327.32323 * 4 2 1 31 31 H 1.09002 * 109.56230 * 170.72109 * 5 4 2 32 32 H 1.08994 * 109.65759 * 50.44282 * 5 4 2 33 33 H 1.08992 * 108.46617 * 299.03967 * 6 5 4 34 34 H 1.09009 * 108.33378 * 181.58269 * 6 5 4 35 35 H 1.08004 * 125.80603 * 0.03560 * 11 10 8 36 36 H 1.09007 * 109.47104 * 125.02341 * 14 13 12 37 37 H 0.96695 * 114.00134 * 60.00251 * 15 14 13 38 38 H 1.08001 * 127.02350 * 179.73253 * 20 13 12 39 39 H 1.09002 * 109.89360 * 230.32156 * 21 7 6 40 40 H 1.08994 * 109.89783 * 351.43945 * 21 7 6 41 41 H 1.08998 * 110.09610 * 204.82169 * 22 21 7 42 42 H 1.08996 * 110.23159 * 83.21620 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4640 1.7634 0.0000 4 6 2.4578 -0.8312 1.5319 5 6 3.8554 -0.2667 1.9073 6 6 4.8298 -0.7195 0.9192 7 7 4.5518 -0.2893 -0.4510 8 6 4.8374 0.9489 -0.9001 9 8 4.5204 1.2747 -2.0280 10 6 5.5341 1.9080 -0.0243 11 6 5.8149 1.7597 1.3024 12 8 6.4556 2.8546 1.7228 13 6 6.6137 3.7320 0.7196 14 6 7.2920 5.0732 0.8304 15 8 6.3372 6.1106 0.5977 16 14 8.0138 5.2649 2.5372 17 1 6.9285 5.1743 3.5466 18 1 9.0060 4.1869 2.7789 19 1 8.6817 6.5867 2.6466 20 6 6.0668 3.2267 -0.3967 21 6 3.9395 -1.3014 -1.2805 22 6 2.4719 -0.8483 -1.5699 23 1 -0.3633 0.5372 0.8761 24 1 -0.3634 0.4901 -0.9033 25 1 -0.3634 -1.0272 0.0272 26 1 3.4838 1.7996 0.3831 27 1 2.4439 2.1540 -1.0174 28 1 1.8158 2.3681 0.6342 29 1 2.5330 -1.9046 1.3583 30 1 1.7577 -0.6419 2.3456 31 1 4.1419 -0.6285 2.8948 32 1 3.8212 0.8227 1.9136 33 1 4.8612 -1.8087 0.9393 34 1 5.8110 -0.3417 1.2071 35 1 5.5625 0.9031 1.9097 36 1 8.0887 5.1398 0.0894 37 1 5.5983 6.1122 1.2214 38 1 6.0275 3.6928 -1.3702 39 1 4.4857 -1.3917 -2.2195 40 1 3.9374 -2.2579 -0.7581 41 1 1.8494 -1.7149 -1.7926 42 1 2.4513 -0.1486 -2.4054 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:27:22 Heat of formation + Delta-G solvation = -50.332949 kcal Electronic energy + Delta-G solvation = -23857.691534 eV Core-core repulsion = 20543.728967 eV Total energy + Delta-G solvation = -3313.962567 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 297.135 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.84930 -41.36772 -38.10487 -37.96127 -34.74686 -33.79397 -32.16066 -30.71346 -29.28440 -28.41264 -27.58221 -26.73015 -25.18936 -23.23101 -22.81928 -22.14639 -20.07228 -18.91657 -18.11055 -17.87140 -17.39147 -16.97859 -16.64175 -16.40591 -15.78871 -15.34901 -15.07403 -14.89724 -14.63078 -14.55365 -14.12260 -13.95349 -13.90764 -13.86126 -13.39649 -13.37898 -13.23326 -13.02617 -12.85103 -12.75856 -12.47254 -12.28111 -12.21358 -12.07919 -11.92569 -10.97540 -10.92592 -10.66541 -10.63408 -10.58846 -10.45040 -9.77679 -9.73624 0.23908 0.89938 1.00098 1.37781 1.42240 1.69197 1.75499 1.84605 1.87381 1.87727 1.96052 2.32005 2.69153 3.19766 3.33277 3.44345 3.47455 3.75108 3.87597 4.09251 4.18379 4.26734 4.29943 4.31791 4.36490 4.57141 4.60155 4.64391 4.73272 4.74826 4.77618 4.79010 4.83390 4.88397 4.91509 4.94147 5.16324 5.24310 5.42774 5.48100 5.50328 5.70333 5.85498 6.33546 6.35640 7.18494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.002 2.998 3 C -0.464 4.464 4 C -0.407 4.407 5 C -0.154 4.154 6 C 0.079 3.921 7 N -0.613 5.613 8 C 0.605 3.395 9 O -0.517 6.517 10 C -0.230 4.230 11 C -0.003 4.003 12 O -0.171 6.171 13 C -0.061 4.061 14 C -0.041 4.041 15 O -0.528 6.528 16 Si 0.958 3.042 17 H -0.248 1.248 18 H -0.247 1.247 19 H -0.245 1.245 20 C -0.121 4.121 21 C 0.123 3.877 22 C -0.424 4.424 23 H 0.066 0.934 24 H 0.068 0.932 25 H 0.067 0.933 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.063 0.937 29 H 0.079 0.921 30 H 0.081 0.919 31 H 0.091 0.909 32 H 0.078 0.922 33 H 0.095 0.905 34 H 0.079 0.921 35 H 0.233 0.767 36 H 0.137 0.863 37 H 0.381 0.619 38 H 0.163 0.837 39 H 0.074 0.926 40 H 0.089 0.911 41 H 0.079 0.921 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.745 -3.061 4.920 5.842 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.197 2.803 3 C -0.570 4.570 4 C -0.494 4.494 5 C -0.192 4.192 6 C -0.044 4.044 7 N -0.347 5.347 8 C 0.396 3.604 9 O -0.393 6.393 10 C -0.235 4.235 11 C -0.072 4.072 12 O -0.068 6.068 13 C -0.109 4.109 14 C -0.151 4.151 15 O -0.334 6.334 16 Si 0.778 3.222 17 H -0.171 1.171 18 H -0.170 1.170 19 H -0.168 1.168 20 C -0.141 4.141 21 C 0.001 3.999 22 C -0.511 4.511 23 H 0.086 0.914 24 H 0.087 0.913 25 H 0.086 0.914 26 H 0.093 0.907 27 H 0.093 0.907 28 H 0.082 0.918 29 H 0.098 0.902 30 H 0.100 0.900 31 H 0.109 0.891 32 H 0.096 0.904 33 H 0.113 0.887 34 H 0.097 0.903 35 H 0.249 0.751 36 H 0.154 0.846 37 H 0.229 0.771 38 H 0.181 0.819 39 H 0.092 0.908 40 H 0.107 0.893 41 H 0.098 0.902 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.487 -2.570 4.898 5.728 hybrid contribution -0.825 -0.414 -0.193 0.943 sum 0.663 -2.984 4.705 5.610 Atomic orbital electron populations 1.26178 1.21100 1.04165 1.04349 0.79190 0.66680 0.67684 0.66791 1.26925 1.05876 1.19239 1.04963 1.26308 1.00181 1.07098 1.15769 1.21112 0.96059 1.02422 0.99584 1.20686 0.99030 1.02240 0.82410 1.47404 1.62653 1.12512 1.12170 1.16831 0.77604 0.80101 0.85878 1.90820 1.52569 1.76467 1.19482 1.21504 1.09355 0.98187 0.94429 1.25955 0.95717 0.90037 0.95474 1.83728 1.60107 1.24601 1.38328 1.22803 1.06709 0.94704 0.86688 1.24423 0.94748 0.80435 1.15543 1.86585 1.38146 1.49235 1.59407 0.85516 0.81107 0.81791 0.73775 1.17119 1.17002 1.16831 1.22512 0.99248 0.92552 0.99745 1.21487 0.93144 0.89735 0.95584 1.27467 0.99555 1.07802 1.16229 0.91447 0.91300 0.91418 0.90667 0.90694 0.91816 0.90186 0.89990 0.89110 0.90397 0.88703 0.90333 0.75112 0.84562 0.77122 0.81896 0.90785 0.89264 0.90210 0.89412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.07 8.65 101.05 0.87 0.94 16 2 Si 1.00 -1.18 9.98 -169.99 -1.70 -2.87 16 3 C -0.46 -0.65 6.83 101.05 0.69 0.04 16 4 C -0.41 1.17 4.72 38.40 0.18 1.36 16 5 C -0.15 0.57 4.30 -28.82 -0.12 0.44 16 6 C 0.08 -0.27 4.42 -7.49 -0.03 -0.30 16 7 N -0.61 0.20 1.62 -178.62 -0.29 -0.08 16 8 C 0.60 1.67 4.17 -12.54 -0.05 1.62 16 9 O -0.52 -3.28 15.42 5.27 0.08 -3.20 16 10 C -0.23 -0.41 4.60 -103.28 -0.48 -0.89 16 11 C 0.00 0.00 8.69 30.08 0.26 0.26 16 12 O -0.17 -0.08 8.90 7.66 0.07 -0.01 16 13 C -0.06 -0.04 6.18 -35.74 -0.22 -0.27 16 14 C -0.04 0.04 2.97 36.01 0.11 0.14 16 15 O -0.53 0.09 12.88 -35.23 -0.45 -0.36 16 16 Si 0.96 -1.03 27.38 -169.99 -4.65 -5.69 16 17 H -0.25 0.10 7.11 56.52 0.40 0.50 16 18 H -0.25 0.04 7.11 56.52 0.40 0.44 16 19 H -0.25 0.04 7.11 56.52 0.40 0.44 16 20 C -0.12 -0.27 10.91 -37.46 -0.41 -0.67 16 21 C 0.12 -0.09 5.73 -3.35 -0.02 -0.11 16 22 C -0.42 0.02 5.02 38.92 0.20 0.21 16 23 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 24 H 0.07 0.04 7.96 -51.93 -0.41 -0.38 16 25 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 26 H 0.07 0.09 1.93 -51.93 -0.10 -0.01 16 27 H 0.07 0.28 7.25 -51.93 -0.38 -0.10 16 28 H 0.06 0.06 7.96 -51.93 -0.41 -0.35 16 29 H 0.08 -0.29 7.90 -51.93 -0.41 -0.70 16 30 H 0.08 -0.24 7.95 -51.93 -0.41 -0.65 16 31 H 0.09 -0.49 8.14 -51.93 -0.42 -0.91 16 32 H 0.08 -0.23 4.11 -51.93 -0.21 -0.44 16 33 H 0.09 -0.49 7.17 -51.93 -0.37 -0.86 16 34 H 0.08 -0.34 5.18 -51.92 -0.27 -0.61 16 35 H 0.23 -0.87 3.29 -52.48 -0.17 -1.05 16 36 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 37 H 0.38 -1.25 8.70 45.56 0.40 -0.86 16 38 H 0.16 0.39 8.06 -52.49 -0.42 -0.03 16 39 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.09 -0.31 7.17 -51.93 -0.37 -0.68 16 41 H 0.08 -0.10 8.00 -51.93 -0.42 -0.51 16 42 H 0.09 0.21 7.47 -51.93 -0.39 -0.18 16 LS Contribution 314.98 15.07 4.75 4.75 Total: 0.00 -7.15 314.98 -6.46 -13.61 By element: Atomic # 1 Polarization: -3.69 SS G_CDS: -5.24 Total: -8.93 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: 0.98 Total: 2.79 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -0.29 Total: -0.08 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.30 Total: -3.57 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: -6.35 Total: -8.56 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -7.15 -6.46 -13.61 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.726 kcal (2) G-P(sol) polarization free energy of solvation -7.148 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.459 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.607 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds