Wall clock time and date at job start Thu Mar 4 2021 18:28:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86294 * 108.73146 * 2 1 4 4 C 1.84159 * 108.84467 * 118.43560 * 2 1 3 5 5 C 1.55341 * 109.11955 * 207.39220 * 4 2 1 6 6 C 1.45978 * 108.92185 * 290.54690 * 5 4 2 7 7 N 1.46269 * 114.57816 * 60.36389 * 6 5 4 8 8 C 1.34780 * 122.82061 * 79.18825 * 7 6 5 9 9 O 1.21278 * 120.00087 * 4.40079 * 8 7 6 10 10 C 1.50695 * 119.99897 * 184.39721 * 8 7 6 11 11 C 1.53032 * 109.33475 * 286.73020 * 10 8 7 12 12 C 1.53540 * 108.56553 * 190.16917 * 11 10 8 13 13 N 1.47029 * 107.65652 * 60.95065 * 12 11 10 14 14 C 1.38925 * 118.88547 * 316.33304 * 13 12 11 15 15 C 1.31123 * 121.84564 * 13.32031 * 14 13 12 16 16 C 1.50693 * 118.54364 * 179.59337 * 15 14 13 17 17 O 1.42901 * 109.47424 * 86.36696 * 16 15 14 18 18 Si 1.86301 * 109.47257 * 326.36359 * 16 15 14 19 19 H 1.48497 * 109.47184 * 60.00369 * 18 16 15 20 20 H 1.48507 * 109.47179 * 180.02562 * 18 16 15 21 21 H 1.48497 * 109.46910 * 299.99952 * 18 16 15 22 22 C 1.44479 * 114.36107 * 259.45991 * 7 6 5 23 23 C 1.56284 * 107.52885 * 111.11500 * 22 7 6 24 24 H 1.09001 * 109.47178 * 301.56318 * 1 2 3 25 25 H 1.08991 * 109.47282 * 61.56876 * 1 2 3 26 26 H 1.09005 * 109.47051 * 181.56710 * 1 2 3 27 27 H 1.08999 * 109.46894 * 157.45198 * 3 2 1 28 28 H 1.08996 * 109.47252 * 277.45075 * 3 2 1 29 29 H 1.09003 * 109.47107 * 37.45558 * 3 2 1 30 30 H 1.08997 * 109.53139 * 87.49736 * 4 2 1 31 31 H 1.09000 * 109.52563 * 327.28308 * 4 2 1 32 32 H 1.09003 * 109.55665 * 170.72074 * 5 4 2 33 33 H 1.08993 * 109.56814 * 50.38481 * 5 4 2 34 34 H 1.08995 * 108.46801 * 299.04022 * 6 5 4 35 35 H 1.09004 * 108.46037 * 181.68067 * 6 5 4 36 36 H 1.09004 * 109.32604 * 46.39024 * 10 8 7 37 37 H 1.09010 * 109.62062 * 70.44739 * 11 10 8 38 38 H 1.09001 * 109.62390 * 309.89619 * 11 10 8 39 39 H 1.08998 * 109.81645 * 301.41087 * 12 11 10 40 40 H 1.09002 * 109.82131 * 180.49272 * 12 11 10 41 41 H 0.96996 * 120.55543 * 136.06780 * 13 12 11 42 42 H 1.07996 * 119.07885 * 193.31745 * 14 13 12 43 43 H 1.09004 * 109.46855 * 206.36506 * 16 15 14 44 44 H 0.96701 * 114.00201 * 179.97438 * 17 16 15 45 45 H 1.08997 * 109.89752 * 230.32517 * 22 7 6 46 46 H 1.09000 * 109.89289 * 351.43953 * 22 7 6 47 47 H 1.08999 * 110.09569 * 204.82873 * 23 22 7 48 48 H 1.08997 * 110.13773 * 83.17355 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4613 1.7643 0.0000 4 6 2.4579 -0.8299 1.5326 5 6 3.8555 -0.2650 1.9074 6 6 4.8299 -0.7186 0.9197 7 7 4.5518 -0.2897 -0.4508 8 6 4.8374 0.9482 -0.9010 9 8 5.4191 1.7349 -0.1844 10 6 4.4340 1.3547 -2.2949 11 6 5.3451 0.6594 -3.3091 12 6 5.0936 1.2735 -4.6936 13 7 5.4276 2.7032 -4.6148 14 6 5.0032 3.4316 -3.5105 15 6 4.5462 2.8465 -2.4298 16 6 4.1145 3.7088 -1.2718 17 8 2.7518 4.0999 -1.4512 18 14 5.1910 5.2272 -1.1930 19 1 5.0585 5.9942 -2.4577 20 1 4.7660 6.0768 -0.0515 21 1 6.6071 4.8208 -1.0066 22 6 3.9395 -1.3024 -1.2796 23 6 2.4720 -0.8496 -1.5692 24 1 -0.3633 0.5379 0.8756 25 1 -0.3633 0.4892 -0.9036 26 1 -0.3633 -1.0273 0.0281 27 1 3.4768 1.8035 0.3941 28 1 2.4518 2.1512 -1.0189 29 1 1.8054 2.3703 0.6250 30 1 2.5331 -1.9035 1.3599 31 1 1.7575 -0.6388 2.3457 32 1 4.1421 -0.6260 2.8952 33 1 3.8199 0.8244 1.9114 34 1 4.8614 -1.8079 0.9407 35 1 5.8123 -0.3431 1.2062 36 1 3.4011 1.0555 -2.4732 37 1 5.1181 -0.4064 -3.3347 38 1 6.3874 0.8077 -3.0267 39 1 4.0451 1.1534 -4.9662 40 1 5.7271 0.7862 -5.4348 41 1 5.9391 3.1297 -5.3200 42 1 5.0511 4.5100 -3.5432 43 1 4.2118 3.1459 -0.3435 44 1 2.4060 4.6579 -0.7411 45 1 4.4857 -1.3935 -2.2184 46 1 3.9376 -2.2586 -0.7563 47 1 1.8495 -1.7164 -1.7911 48 1 2.4532 -0.1501 -2.4049 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:28:08 Heat of formation + Delta-G solvation = -41.474793 kcal Electronic energy + Delta-G solvation = -27687.052680 eV Core-core repulsion = 24288.343796 eV Total energy + Delta-G solvation = -3398.708884 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 312.178 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.10870 -39.51347 -37.82585 -37.31000 -34.92531 -33.09177 -32.56753 -30.64455 -29.20309 -28.41407 -27.69977 -26.50169 -25.52063 -24.08659 -23.10585 -22.37293 -20.09576 -19.04699 -18.45060 -18.41602 -17.70951 -17.22069 -16.76027 -16.30900 -15.57527 -15.29244 -15.25435 -14.99367 -14.94132 -14.58760 -14.32569 -14.21303 -13.92550 -13.71012 -13.62977 -13.52333 -13.51498 -13.23898 -12.97193 -12.85003 -12.79196 -12.45980 -12.34377 -12.27673 -12.05407 -12.02656 -11.58025 -11.48121 -11.35452 -11.21285 -10.65235 -10.46014 -10.32679 -10.28930 -9.86671 -9.50497 -8.32809 1.21684 1.32415 1.38899 1.52012 1.65733 1.92168 1.94808 2.03698 2.09117 2.20788 2.73147 2.87419 3.64242 3.71362 3.86725 3.97419 4.05673 4.12453 4.22840 4.31860 4.43343 4.45733 4.49035 4.60146 4.61815 4.74345 4.75975 4.81652 4.82147 4.84024 4.88835 4.94794 4.96460 5.04839 5.08194 5.14966 5.17060 5.22370 5.30760 5.31524 5.47935 5.55442 5.59959 5.67990 5.73483 5.95436 6.43296 6.56285 6.92676 6.99752 7.27592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.464 4.464 2 Si 1.035 2.965 3 C -0.504 4.504 4 C -0.416 4.416 5 C -0.130 4.130 6 C 0.103 3.897 7 N -0.610 5.610 8 C 0.543 3.457 9 O -0.563 6.563 10 C -0.051 4.051 11 C -0.134 4.134 12 C 0.121 3.879 13 N -0.752 5.752 14 C 0.129 3.871 15 C -0.234 4.234 16 C -0.071 4.071 17 O -0.556 6.556 18 Si 0.950 3.050 19 H -0.256 1.256 20 H -0.270 1.270 21 H -0.282 1.282 22 C 0.097 3.903 23 C -0.429 4.429 24 H 0.056 0.944 25 H 0.063 0.937 26 H 0.070 0.930 27 H 0.075 0.925 28 H 0.094 0.906 29 H 0.054 0.946 30 H 0.091 0.909 31 H 0.071 0.929 32 H 0.082 0.918 33 H 0.054 0.946 34 H 0.106 0.894 35 H 0.054 0.946 36 H 0.120 0.880 37 H 0.110 0.890 38 H 0.058 0.942 39 H 0.068 0.932 40 H 0.104 0.896 41 H 0.409 0.591 42 H 0.130 0.870 43 H 0.100 0.900 44 H 0.380 0.620 45 H 0.091 0.909 46 H 0.115 0.885 47 H 0.104 0.896 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.133 -6.344 -3.369 7.272 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.570 4.570 2 Si 1.227 2.773 3 C -0.608 4.608 4 C -0.502 4.502 5 C -0.168 4.168 6 C -0.019 4.019 7 N -0.343 5.343 8 C 0.335 3.665 9 O -0.443 6.443 10 C -0.072 4.072 11 C -0.172 4.172 12 C -0.003 4.003 13 N -0.383 5.383 14 C 0.007 3.993 15 C -0.245 4.245 16 C -0.183 4.183 17 O -0.363 6.363 18 Si 0.779 3.221 19 H -0.181 1.181 20 H -0.195 1.195 21 H -0.207 1.207 22 C -0.025 4.025 23 C -0.517 4.517 24 H 0.076 0.924 25 H 0.082 0.918 26 H 0.089 0.911 27 H 0.093 0.907 28 H 0.113 0.887 29 H 0.073 0.927 30 H 0.110 0.890 31 H 0.090 0.910 32 H 0.100 0.900 33 H 0.073 0.927 34 H 0.125 0.875 35 H 0.072 0.928 36 H 0.137 0.863 37 H 0.128 0.872 38 H 0.076 0.924 39 H 0.087 0.913 40 H 0.122 0.878 41 H 0.245 0.755 42 H 0.147 0.853 43 H 0.118 0.882 44 H 0.228 0.772 45 H 0.109 0.891 46 H 0.133 0.867 47 H 0.123 0.877 48 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -0.239 -5.671 -3.498 6.667 hybrid contribution -0.179 0.837 0.746 1.135 sum -0.419 -4.834 -2.752 5.578 Atomic orbital electron populations 1.26375 1.22880 1.04066 1.03642 0.78712 0.64823 0.66386 0.67385 1.27595 1.06074 1.20774 1.06386 1.26427 1.00282 1.07792 1.15653 1.20715 0.95403 1.01209 0.99522 1.20194 0.98655 1.01423 0.81653 1.47692 1.61543 1.12461 1.12582 1.20470 0.76565 0.80538 0.88960 1.90577 1.42554 1.51468 1.59718 1.20124 1.02699 0.92875 0.91482 1.22049 0.98986 1.01238 0.94936 1.21715 1.01581 0.80514 0.96530 1.44588 1.61537 1.09739 1.22429 1.20635 0.94838 0.96334 0.87535 1.19562 1.15368 0.93891 0.95668 1.24947 0.87961 1.03899 1.01450 1.86470 1.26224 1.72263 1.51345 0.85826 0.78910 0.78058 0.79324 1.18116 1.19544 1.20697 1.22059 0.92497 0.91355 0.96557 1.27627 1.00484 1.08786 1.14761 0.92429 0.91814 0.91073 0.90679 0.88689 0.92665 0.89041 0.91021 0.89966 0.92740 0.87540 0.92781 0.86262 0.87233 0.92354 0.91340 0.87763 0.75521 0.85290 0.88248 0.77195 0.89142 0.86692 0.87704 0.89654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 0.29 8.65 113.37 0.98 1.27 16 2 Si 1.04 -3.50 9.70 68.60 0.67 -2.83 16 3 C -0.50 -1.56 4.69 113.37 0.53 -1.02 16 4 C -0.42 1.36 4.73 72.79 0.34 1.70 16 5 C -0.13 0.07 5.51 29.24 0.16 0.24 16 6 C 0.10 -0.18 4.87 84.27 0.41 0.23 16 7 N -0.61 0.96 1.62 -833.36 -1.35 -0.39 16 8 C 0.54 2.38 3.22 87.65 0.28 2.66 16 9 O -0.56 -6.73 12.67 -3.02 -0.04 -6.77 16 10 C -0.05 -0.09 1.16 -12.43 -0.01 -0.11 16 11 C -0.13 0.36 5.24 30.79 0.16 0.53 16 12 C 0.12 -0.56 7.16 86.46 0.62 0.06 16 13 N -0.75 0.64 5.83 -345.89 -2.02 -1.38 16 14 C 0.13 0.57 9.55 83.41 0.80 1.37 16 15 C -0.23 -1.43 4.34 -16.77 -0.07 -1.50 16 16 C -0.07 -0.52 1.12 71.23 0.08 -0.44 16 17 O -0.56 -2.89 10.47 -148.98 -1.56 -4.45 16 18 Si 0.95 7.83 26.14 68.60 1.79 9.62 16 19 H -0.26 -1.81 6.32 99.48 0.63 -1.19 16 20 H -0.27 -2.38 7.11 99.48 0.71 -1.67 16 21 H -0.28 -3.66 7.11 99.48 0.71 -2.96 16 22 C 0.10 -0.76 5.52 87.90 0.49 -0.28 16 23 C -0.43 3.08 4.90 73.12 0.36 3.43 16 24 H 0.06 0.06 7.96 -2.39 -0.02 0.04 16 25 H 0.06 0.02 7.96 -2.39 -0.02 0.00 16 26 H 0.07 -0.15 7.96 -2.38 -0.02 -0.16 16 27 H 0.07 0.47 1.89 -2.39 0.00 0.46 16 28 H 0.09 0.42 3.27 -2.39 -0.01 0.41 16 29 H 0.05 0.21 7.96 -2.39 -0.02 0.19 16 30 H 0.09 -0.61 7.90 -2.39 -0.02 -0.62 16 31 H 0.07 -0.14 7.95 -2.39 -0.02 -0.16 16 32 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 33 H 0.05 0.22 5.98 -2.39 -0.01 0.21 16 34 H 0.11 -0.79 7.17 -2.39 -0.02 -0.81 16 35 H 0.05 0.12 7.86 -2.38 -0.02 0.10 16 36 H 0.12 -0.06 3.69 -2.38 -0.01 -0.07 16 37 H 0.11 -0.90 5.45 -2.38 -0.01 -0.91 16 38 H 0.06 0.07 8.11 -2.39 -0.02 0.05 16 39 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 40 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 41 H 0.41 -1.87 8.96 -92.71 -0.83 -2.70 16 42 H 0.13 0.56 5.10 -2.91 -0.01 0.54 16 43 H 0.10 0.94 2.84 -2.39 -0.01 0.94 16 44 H 0.38 -0.33 8.74 -74.06 -0.65 -0.97 16 45 H 0.09 -0.92 5.26 -2.39 -0.01 -0.93 16 46 H 0.11 -1.39 7.17 -2.39 -0.02 -1.41 16 47 H 0.10 -1.07 8.00 -2.39 -0.02 -1.09 16 48 H 0.09 -0.55 5.43 -2.39 -0.01 -0.56 16 Total: 0.00 -15.69 324.68 2.82 -12.87 By element: Atomic # 1 Polarization: -15.00 SS G_CDS: 0.21 Total: -14.79 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: 5.12 Total: 8.14 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -3.37 Total: -1.77 kcal Atomic # 8 Polarization: -9.63 SS G_CDS: -1.60 Total: -11.23 kcal Atomic # 14 Polarization: 4.33 SS G_CDS: 2.46 Total: 6.79 kcal Total: -15.69 2.82 -12.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.609 kcal (2) G-P(sol) polarization free energy of solvation -15.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.866 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds