Wall clock time and date at job start Thu Mar 4 2021 18:29:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86299 * 108.81934 * 2 1 4 4 C 1.84155 * 108.84389 * 118.48278 * 2 1 3 5 5 C 1.55341 * 109.12155 * 207.39389 * 4 2 1 6 6 C 1.45976 * 108.92139 * 290.54654 * 5 4 2 7 7 N 1.46272 * 114.57657 * 60.36159 * 6 5 4 8 8 C 1.34779 * 122.82209 * 79.19212 * 7 6 5 9 9 O 1.21284 * 119.99714 * 4.83769 * 8 7 6 10 10 C 1.50691 * 120.00312 * 184.56381 * 8 7 6 11 11 C 1.53005 * 109.47557 * 186.14893 * 10 8 7 12 12 O 1.42898 * 109.47241 * 180.02562 * 11 10 8 13 13 C 1.35899 * 116.99458 * 179.97438 * 12 11 10 14 14 C 1.38729 * 120.06117 * 359.72310 * 13 12 11 15 15 C 1.38145 * 119.94453 * 179.74207 * 14 13 12 16 16 C 1.38262 * 120.05664 * 0.51142 * 15 14 13 17 17 C 1.50699 * 119.94665 * 179.74321 * 16 15 14 18 18 O 1.42904 * 109.47341 * 245.02332 * 17 16 15 19 19 Si 1.86305 * 109.46980 * 5.01847 * 17 16 15 20 20 H 1.48506 * 109.46725 * 60.00048 * 19 17 16 21 21 H 1.48499 * 109.47252 * 179.97438 * 19 17 16 22 22 H 1.48494 * 109.47350 * 300.00322 * 19 17 16 23 23 C 1.38271 * 120.11190 * 359.76626 * 16 15 14 24 24 C 1.38145 * 120.05454 * 359.97438 * 23 16 15 25 25 C 1.44478 * 114.35991 * 259.45916 * 7 6 5 26 26 C 1.56285 * 107.52703 * 111.11848 * 25 7 6 27 27 H 1.08995 * 109.47053 * 301.51766 * 1 2 3 28 28 H 1.09005 * 109.46919 * 61.52164 * 1 2 3 29 29 H 1.09004 * 109.47291 * 181.51618 * 1 2 3 30 30 H 1.08998 * 109.47440 * 159.62998 * 3 2 1 31 31 H 1.09010 * 109.46671 * 279.62893 * 3 2 1 32 32 H 1.08996 * 109.46980 * 39.62376 * 3 2 1 33 33 H 1.09001 * 109.53127 * 87.49747 * 4 2 1 34 34 H 1.08998 * 109.58618 * 327.31816 * 4 2 1 35 35 H 1.09001 * 109.56216 * 170.72263 * 5 4 2 36 36 H 1.08994 * 109.65955 * 50.43574 * 5 4 2 37 37 H 1.09003 * 108.46796 * 299.04047 * 6 5 4 38 38 H 1.08997 * 108.33575 * 181.58598 * 6 5 4 39 39 H 1.09005 * 109.47481 * 306.14528 * 10 8 7 40 40 H 1.08997 * 109.47216 * 66.14750 * 10 8 7 41 41 H 1.09005 * 109.46427 * 300.00279 * 11 10 8 42 42 H 1.08997 * 109.46975 * 59.99709 * 11 10 8 43 43 H 1.08003 * 120.02457 * 359.97438 * 14 13 12 44 44 H 1.07999 * 119.96848 * 180.23091 * 15 14 13 45 45 H 1.08991 * 109.47288 * 125.02075 * 17 16 15 46 46 H 0.96695 * 114.00378 * 180.02562 * 18 17 16 47 47 H 1.07993 * 119.97300 * 179.97438 * 23 16 15 48 48 H 1.07994 * 120.02801 * 179.97438 * 24 23 16 49 49 H 1.09004 * 109.89464 * 230.32538 * 25 7 6 50 50 H 1.09000 * 109.89552 * 351.44123 * 25 7 6 51 51 H 1.09005 * 110.09809 * 204.82478 * 26 25 7 52 52 H 1.09005 * 110.14516 * 83.17164 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4640 1.7634 0.0000 4 6 2.4578 -0.8312 1.5319 5 6 3.8554 -0.2665 1.9073 6 6 4.8299 -0.7193 0.9192 7 7 4.5518 -0.2893 -0.4509 8 6 4.8374 0.9489 -0.9002 9 8 5.4262 1.7324 -0.1857 10 6 4.4308 1.3579 -2.2924 11 6 5.0029 2.7420 -2.6051 12 8 4.6167 3.1300 -3.9250 13 6 5.0456 4.3434 -4.3616 14 6 5.8172 5.1466 -3.5346 15 6 6.2563 6.3773 -3.9828 16 6 5.9185 6.8134 -5.2506 17 6 6.3940 8.1589 -5.7349 18 8 5.2694 9.0172 -5.9370 19 14 7.5286 8.9113 -4.4630 20 1 8.6973 8.0193 -4.2530 21 1 7.9977 10.2368 -4.9405 22 1 6.7958 9.0768 -3.1821 23 6 5.1447 6.0173 -6.0748 24 6 4.7076 4.7834 -5.6333 25 6 3.9395 -1.3013 -1.2805 26 6 2.4720 -0.8483 -1.5699 27 1 -0.3633 0.5372 0.8760 28 1 -0.3633 0.4900 -0.9034 29 1 -0.3634 -1.0273 0.0272 30 1 3.4931 1.7966 0.3577 31 1 2.4184 2.1627 -1.0133 32 1 1.8320 2.3626 0.6554 33 1 2.5331 -1.9046 1.3583 34 1 1.7578 -0.6418 2.3457 35 1 4.1420 -0.6283 2.8947 36 1 3.8213 0.8229 1.9135 37 1 4.8613 -1.8087 0.9393 38 1 5.8110 -0.3417 1.2071 39 1 4.8165 0.6346 -3.0109 40 1 3.3433 1.3909 -2.3583 41 1 4.6171 3.4653 -1.8866 42 1 6.0904 2.7090 -2.5391 43 1 6.0775 4.8083 -2.5425 44 1 6.8602 7.0013 -3.3406 45 1 6.9319 8.0374 -6.6750 46 1 5.5013 9.9023 -6.2499 47 1 4.8819 6.3603 -7.0645 48 1 4.1029 4.1621 -6.2772 49 1 4.4858 -1.3916 -2.2195 50 1 3.9376 -2.2580 -0.7581 51 1 1.8495 -1.7149 -1.7926 52 1 2.4531 -0.1480 -2.4051 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_4549602.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:29:02 Heat of formation + Delta-G solvation = -93.127211 kcal Electronic energy + Delta-G solvation = -29867.905723 eV Core-core repulsion = 25957.248461 eV Total energy + Delta-G solvation = -3910.657262 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 351.182 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.81669 -41.16918 -39.15276 -37.91019 -37.23659 -34.90857 -33.20333 -32.07620 -31.55975 -30.70077 -29.24272 -28.42124 -27.41335 -26.40295 -25.60735 -24.22641 -23.28127 -22.36005 -21.95754 -20.13402 -19.32503 -18.45632 -18.10705 -17.55663 -17.32166 -17.09414 -16.80224 -16.52454 -15.86589 -15.76016 -15.43164 -15.36182 -14.90867 -14.73257 -14.52902 -14.46758 -14.40714 -14.23068 -13.90367 -13.77189 -13.74832 -13.66176 -13.38827 -13.29138 -13.00539 -12.87813 -12.77424 -12.61032 -12.43442 -12.22658 -12.16941 -12.10223 -11.85979 -11.72159 -11.64591 -11.59397 -11.03439 -10.76530 -10.46424 -10.42264 -10.29898 -10.07233 -9.72278 -9.23487 0.23749 0.27401 1.15913 1.42491 1.45094 1.47258 1.61622 1.83630 1.88831 1.92465 2.00112 2.35507 2.60091 2.74277 3.46276 3.50779 3.69728 3.76087 3.80975 3.84317 3.97441 4.01365 4.10759 4.18744 4.20384 4.27596 4.37142 4.42032 4.47624 4.53342 4.57243 4.60703 4.67343 4.68165 4.71110 4.77444 4.79874 4.82859 4.87834 4.92145 4.93009 4.98995 5.09707 5.15442 5.22922 5.23878 5.38791 5.46583 5.47331 5.55344 5.61035 5.62366 5.68812 6.27385 6.37446 6.84207 7.03485 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.466 4.466 2 Si 1.048 2.952 3 C -0.502 4.502 4 C -0.417 4.417 5 C -0.132 4.132 6 C 0.103 3.897 7 N -0.607 5.607 8 C 0.541 3.459 9 O -0.576 6.576 10 C -0.147 4.147 11 C 0.072 3.928 12 O -0.317 6.317 13 C 0.122 3.878 14 C -0.213 4.213 15 C -0.097 4.097 16 C -0.126 4.126 17 C -0.072 4.072 18 O -0.563 6.563 19 Si 0.970 3.030 20 H -0.261 1.261 21 H -0.251 1.251 22 H -0.277 1.277 23 C -0.054 4.054 24 C -0.155 4.155 25 C 0.100 3.900 26 C -0.428 4.428 27 H 0.056 0.944 28 H 0.065 0.935 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.064 0.936 32 H 0.053 0.947 33 H 0.096 0.904 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.050 0.950 37 H 0.113 0.887 38 H 0.055 0.945 39 H 0.128 0.872 40 H 0.129 0.871 41 H 0.061 0.939 42 H 0.066 0.934 43 H 0.134 0.866 44 H 0.126 0.874 45 H 0.099 0.901 46 H 0.398 0.602 47 H 0.151 0.849 48 H 0.149 0.851 49 H 0.090 0.910 50 H 0.119 0.881 51 H 0.108 0.892 52 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.629 -5.393 -2.942 6.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.572 4.572 2 Si 1.239 2.761 3 C -0.605 4.605 4 C -0.503 4.503 5 C -0.170 4.170 6 C -0.019 4.019 7 N -0.340 5.340 8 C 0.332 3.668 9 O -0.457 6.457 10 C -0.186 4.186 11 C -0.004 4.004 12 O -0.231 6.231 13 C 0.076 3.924 14 C -0.232 4.232 15 C -0.115 4.115 16 C -0.126 4.126 17 C -0.183 4.183 18 O -0.372 6.372 19 Si 0.796 3.204 20 H -0.186 1.186 21 H -0.175 1.175 22 H -0.202 1.202 23 C -0.072 4.072 24 C -0.173 4.173 25 C -0.022 4.022 26 C -0.516 4.516 27 H 0.076 0.924 28 H 0.084 0.916 29 H 0.094 0.906 30 H 0.094 0.906 31 H 0.083 0.917 32 H 0.072 0.928 33 H 0.115 0.885 34 H 0.092 0.908 35 H 0.104 0.896 36 H 0.069 0.931 37 H 0.131 0.869 38 H 0.074 0.926 39 H 0.146 0.854 40 H 0.147 0.853 41 H 0.079 0.921 42 H 0.084 0.916 43 H 0.152 0.848 44 H 0.144 0.856 45 H 0.117 0.883 46 H 0.248 0.752 47 H 0.169 0.831 48 H 0.167 0.833 49 H 0.108 0.892 50 H 0.137 0.863 51 H 0.126 0.874 52 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -0.154 -5.267 -1.839 5.581 hybrid contribution 0.019 0.911 0.301 0.960 sum -0.135 -4.356 -1.537 4.621 Atomic orbital electron populations 1.26380 1.22551 1.04492 1.03789 0.78568 0.64963 0.64792 0.67785 1.27448 1.06992 1.22318 1.03739 1.26435 1.00201 1.08144 1.15552 1.20726 0.95551 1.00997 0.99766 1.20252 0.98756 1.01751 0.81176 1.47645 1.61195 1.12113 1.13028 1.20098 0.77006 0.81180 0.88532 1.90734 1.42898 1.52300 1.59748 1.21853 1.05487 0.96694 0.94570 1.22456 1.00038 0.96416 0.81441 1.85952 1.71995 1.32170 1.32961 1.19181 0.94288 0.84874 0.94034 1.21340 1.03836 0.96669 1.01315 1.20969 0.99203 0.95991 0.95311 1.19477 1.02183 0.96343 0.94633 1.24610 0.95033 0.90619 1.07998 1.86466 1.32282 1.28171 1.90242 0.85421 0.77169 0.79820 0.78022 1.18583 1.17492 1.20188 1.21056 0.94000 0.91838 1.00325 1.20740 1.04474 0.97944 0.94184 1.21993 0.92493 0.91298 0.96397 1.27579 1.00370 1.09113 1.14532 0.92426 0.91600 0.90584 0.90624 0.91732 0.92753 0.88486 0.90793 0.89613 0.93130 0.86934 0.92622 0.85393 0.85309 0.92106 0.91563 0.84776 0.85614 0.88294 0.75185 0.83104 0.83297 0.89205 0.86335 0.87357 0.89432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.47 1.00 8.65 113.37 0.98 1.99 16 2 Si 1.05 -5.08 9.68 68.60 0.66 -4.42 16 3 C -0.50 -1.34 6.73 113.37 0.76 -0.58 16 4 C -0.42 1.91 4.72 72.79 0.34 2.25 16 5 C -0.13 0.19 5.50 29.24 0.16 0.35 16 6 C 0.10 -0.30 4.88 84.27 0.41 0.11 16 7 N -0.61 1.78 1.62 -833.35 -1.35 0.43 16 8 C 0.54 1.48 4.12 87.65 0.36 1.84 16 9 O -0.58 -6.44 14.62 -3.04 -0.04 -6.48 16 10 C -0.15 0.11 3.96 29.85 0.12 0.23 16 11 C 0.07 0.30 4.05 71.98 0.29 0.59 16 12 O -0.32 -1.86 10.14 -92.42 -0.94 -2.80 16 13 C 0.12 0.88 6.69 22.51 0.15 1.03 16 14 C -0.21 -1.62 9.04 22.37 0.20 -1.41 16 15 C -0.10 -0.67 8.66 22.25 0.19 -0.48 16 16 C -0.13 -0.66 5.39 -19.85 -0.11 -0.77 16 17 C -0.07 -0.03 2.79 71.24 0.20 0.17 16 18 O -0.56 -0.62 12.81 -148.98 -1.91 -2.53 16 19 Si 0.97 0.94 25.14 68.60 1.72 2.66 16 20 H -0.26 -0.69 7.11 99.48 0.71 0.01 16 21 H -0.25 0.04 7.11 99.48 0.71 0.75 16 22 H -0.28 -1.50 7.04 99.48 0.70 -0.80 16 23 C -0.05 -0.22 9.68 22.26 0.22 0.00 16 24 C -0.16 -0.75 9.99 22.37 0.22 -0.53 16 25 C 0.10 -0.93 5.56 87.90 0.49 -0.44 16 26 C -0.43 3.84 4.90 73.12 0.36 4.20 16 27 H 0.06 -0.01 7.96 -2.39 -0.02 -0.03 16 28 H 0.06 -0.10 7.96 -2.38 -0.02 -0.12 16 29 H 0.08 -0.28 7.96 -2.39 -0.02 -0.30 16 30 H 0.08 0.48 2.68 -2.39 -0.01 0.48 16 31 H 0.06 0.14 5.88 -2.38 -0.01 0.13 16 32 H 0.05 0.25 7.96 -2.39 -0.02 0.23 16 33 H 0.10 -0.81 7.90 -2.39 -0.02 -0.83 16 34 H 0.07 -0.24 7.95 -2.39 -0.02 -0.26 16 35 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.05 0.19 6.04 -2.39 -0.01 0.18 16 37 H 0.11 -1.01 7.17 -2.39 -0.02 -1.03 16 38 H 0.06 0.06 7.85 -2.39 -0.02 0.05 16 39 H 0.13 -0.69 7.52 -2.38 -0.02 -0.71 16 40 H 0.13 -0.42 3.96 -2.39 -0.01 -0.43 16 41 H 0.06 0.41 7.54 -2.38 -0.02 0.39 16 42 H 0.07 0.32 7.68 -2.39 -0.02 0.30 16 43 H 0.13 0.84 6.30 -2.91 -0.02 0.82 16 44 H 0.13 0.62 4.86 -2.91 -0.01 0.61 16 45 H 0.10 -0.43 7.96 -2.39 -0.02 -0.45 16 46 H 0.40 -3.25 8.74 -74.06 -0.65 -3.90 16 47 H 0.15 -0.02 8.06 -2.91 -0.02 -0.04 16 48 H 0.15 0.16 8.06 -2.91 -0.02 0.13 16 49 H 0.09 -1.01 7.53 -2.39 -0.02 -1.02 16 50 H 0.12 -1.62 7.17 -2.39 -0.02 -1.63 16 51 H 0.11 -1.28 8.00 -2.38 -0.02 -1.30 16 52 H 0.09 -0.78 5.81 -2.38 -0.01 -0.79 16 Total: 0.00 -18.94 385.21 4.54 -14.40 By element: Atomic # 1 Polarization: -10.86 SS G_CDS: 1.03 Total: -9.83 kcal Atomic # 6 Polarization: 3.20 SS G_CDS: 5.35 Total: 8.55 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -1.35 Total: 0.43 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -2.89 Total: -11.81 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.39 Total: -1.75 kcal Total: -18.94 4.54 -14.40 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_4549602.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.722 kcal (2) G-P(sol) polarization free energy of solvation -18.940 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.405 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds